RNA–Protein interactions for RNA: ENST00000586237.1

PKN1-206, Transcript of protein kinase N1, humanhuman

TSL 5

Gene PKN1, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKN1-206ENST00000586237 NISCHQ9Y2I1 1504 aa36.04■■■■□ 3.36
PKN1-206ENST00000586237 CCDC180Q9P1Z9 1646 aa31.78■■■□□ 2.68
PKN1-206ENST00000586237 ABCC9O60706 1549 aa30.93■■■□□ 2.54
PKN1-206ENST00000586237 DCAF8L2P0C7V8 631 aa30.16■■■□□ 2.42
PKN1-206ENST00000586237 ZCCHC6Q5VYS8 1495 aaKnown RBP30.08■■■□□ 2.41
PKN1-206ENST00000586237 NACADO15069 1562 aa29.82■■■□□ 2.36
PKN1-206ENST00000586237 RB1CC1Q8TDY2 1594 aa29.78■■■□□ 2.36
PKN1-206ENST00000586237 DCAF1Q9Y4B6 1507 aa29.75■■■□□ 2.35
PKN1-206ENST00000586237 MYO15BQ96JP2 1530 aa29.71■■■□□ 2.35
PKN1-206ENST00000586237 SCRIBQ14160 1630 aa29.17■■■□□ 2.26
PKN1-206ENST00000586237 UNC13AQ9UPW8 1703 aa29.17■■■□□ 2.26
PKN1-206ENST00000586237 PABPN1Q86U42 306 aaKnown RBP eCLIP29.03■■■□□ 2.24
PKN1-206ENST00000586237 BICRAQ9NZM4 1560 aa28.92■■■□□ 2.22
PKN1-206ENST00000586237 SHROOM4Q9ULL8 1493 aa28.88■■■□□ 2.21
PKN1-206ENST00000586237 CECR2Q9BXF3 1484 aa28.13■■■□□ 2.09
PKN1-206ENST00000586237 DNAJC5BQ9UF47 199 aa28.12■■■□□ 2.09
PKN1-206ENST00000586237 EIF4G1Q04637 1599 aaKnown RBP28.11■■■□□ 2.09
PKN1-206ENST00000586237 CC2D2AQ9P2K1 1620 aa27.92■■■□□ 2.06
PKN1-206ENST00000586237 SMARCA4P51532 1647 aa27.88■■■□□ 2.05
PKN1-206ENST00000586237 BAZ1AQ9NRL2 1556 aaPredicted RBP27.87■■■□□ 2.05
PKN1-206ENST00000586237 MROH2BQ7Z745 1585 aa27.84■■■□□ 2.05
PKN1-206ENST00000586237 ATAD2BQ9ULI0 1458 aa27.65■■■□□ 2.02
PKN1-206ENST00000586237 RSF1Q96T23 1441 aaPredicted RBP27.65■■■□□ 2.02
PKN1-206ENST00000586237 SMARCA2P51531 1590 aa27.58■■■□□ 2.01
PKN1-206ENST00000586237 WIZO95785 1651 aa27.56■■■□□ 2
PKN1-206ENST00000586237 NCAPD3P42695 1498 aa27.55■■■□□ 2
PKN1-206ENST00000586237 PEG3Q9GZU2 1588 aa27.54■■■□□ 2
PKN1-206ENST00000586237 BAZ1BQ9UIG0 1483 aaKnown RBP27.44■■□□□ 1.98
PKN1-206ENST00000586237 HMGXB3Q12766 1538 aa27.41■■□□□ 1.98
PKN1-206ENST00000586237 SUPT5HO00267 1087 aaKnown RBP27.36■■□□□ 1.97
PKN1-206ENST00000586237 TOP2AP11388 1531 aaKnown RBP27.22■■□□□ 1.95
PKN1-206ENST00000586237 CCDC88BA6NC98 1476 aa26.97■■□□□ 1.91
PKN1-206ENST00000586237 NESP48681 1621 aa26.88■■□□□ 1.89
PKN1-206ENST00000586237 CADPSQ9ULU8 1353 aa26.81■■□□□ 1.88
PKN1-206ENST00000586237 LAMC3Q9Y6N6 1575 aa26.73■■□□□ 1.87
PKN1-206ENST00000586237 CFTRP13569 1480 aa26.69■■□□□ 1.86
PKN1-206ENST00000586237 PDS5BQ9NTI5 1447 aa26.57■■□□□ 1.84
PKN1-206ENST00000586237 ERCC6Q03468 1493 aa26.57■■□□□ 1.84
PKN1-206ENST00000586237 KIF21AQ7Z4S6 1674 aa26.51■■□□□ 1.83
PKN1-206ENST00000586237 FANCD2Q9BXW9 1451 aa26.5■■□□□ 1.83
PKN1-206ENST00000586237 PRDM2Q13029 1718 aa26.47■■□□□ 1.83
PKN1-206ENST00000586237 CEP164Q9UPV0 1460 aa26.41■■□□□ 1.82
PKN1-206ENST00000586237 THOC2Q8NI27 1593 aaKnown RBP26.29■■□□□ 1.8
PKN1-206ENST00000586237 MRC2Q9UBG0 1479 aa26.29■■□□□ 1.8
PKN1-206ENST00000586237 URB2Q14146 1524 aaKnown RBP26.23■■□□□ 1.79
PKN1-206ENST00000586237 WDR62O43379 1518 aa26.16■■□□□ 1.78
PKN1-206ENST00000586237 ABCC8Q09428 1581 aa26.13■■□□□ 1.77
PKN1-206ENST00000586237 TOPBP1Q92547 1522 aa26.12■■□□□ 1.77
PKN1-206ENST00000586237 DNMBPQ6XZF7 1577 aa26.08■■□□□ 1.77
PKN1-206ENST00000586237 CUX2O14529 1486 aa26.08■■□□□ 1.77
PKN1-206ENST00000586237 CUX1P39880 1505 aa26.08■■□□□ 1.77
PKN1-206ENST00000586237 WRNQ14191 1432 aaPredicted RBP eCLIP26.03■■□□□ 1.76
PKN1-206ENST00000586237 SYNJ1O43426 1573 aa25.97■■□□□ 1.75
PKN1-206ENST00000586237 POLA1P09884 1462 aaPredicted RBP25.92■■□□□ 1.74
PKN1-206ENST00000586237 FGD5Q6ZNL6 1462 aa25.92■■□□□ 1.74
PKN1-206ENST00000586237 TOP2BQ02880 1626 aa25.9■■□□□ 1.74
PKN1-206ENST00000586237 BIVM-ERCC5R4GMW8 1640 aa25.88■■□□□ 1.73
PKN1-206ENST00000586237 RAD54L2Q9Y4B4 1467 aa25.87■■□□□ 1.73
PKN1-206ENST00000586237 SOGA1O94964 1423 aa25.85■■□□□ 1.73
PKN1-206ENST00000586237 IFT140Q96RY7 1462 aa25.82■■□□□ 1.72
PKN1-206ENST00000586237 TARBP1Q13395 1621 aaKnown RBP25.78■■□□□ 1.72
PKN1-206ENST00000586237 ZNF608Q9ULD9 1512 aaPredicted RBP25.76■■□□□ 1.71
PKN1-206ENST00000586237 TRIM41Q8WV44 630 aa25.75■■□□□ 1.71
PKN1-206ENST00000586237 CHIC1Q5VXU3 224 aa25.71■■□□□ 1.71
PKN1-206ENST00000586237 TDRD9Q8NDG6 1382 aaKnown RBP25.7■■□□□ 1.71
PKN1-206ENST00000586237 AQRO60306 1485 aaKnown RBP eCLIP25.68■■□□□ 1.73e-6■■■■□ 26.2
PKN1-206ENST00000586237 ABCA10Q8WWZ4 1543 aa25.65■■□□□ 1.7
PKN1-206ENST00000586237 WDR97A6NE52 1622 aa25.63■■□□□ 1.69
PKN1-206ENST00000586237 EIF4G3O43432 1585 aaKnown RBP25.61■■□□□ 1.69
PKN1-206ENST00000586237 GAPVD1Q14C86 1478 aa25.53■■□□□ 1.68
PKN1-206ENST00000586237 ABCA5Q8WWZ7 1642 aa25.51■■□□□ 1.67
PKN1-206ENST00000586237 GRIN2BQ13224 1484 aa25.46■■□□□ 1.67
PKN1-206ENST00000586237 RUSC2Q8N2Y8 1516 aa25.45■■□□□ 1.66
PKN1-206ENST00000586237 KIF27Q86VH2 1401 aa25.45■■□□□ 1.66
PKN1-206ENST00000586237 PBRM1Q86U86 1689 aa25.42■■□□□ 1.66
PKN1-206ENST00000586237 SNAPC4Q5SXM2 1469 aa25.4■■□□□ 1.66
PKN1-206ENST00000586237 IGF1RP08069 1367 aa25.35■■□□□ 1.65
PKN1-206ENST00000586237 FBLN2P98095 1184 aa25.35■■□□□ 1.65
PKN1-206ENST00000586237 ERICH3Q5RHP9 1530 aa25.32■■□□□ 1.64
PKN1-206ENST00000586237 FAM9AQ8IZU1 332 aaPredicted RBP25.32■■□□□ 1.64
PKN1-206ENST00000586237 MAGI1Q96QZ7 1491 aaPredicted RBP25.31■■□□□ 1.64
PKN1-206ENST00000586237 CHMP7Q8WUX9 453 aaPredicted RBP25.27■■□□□ 1.64
PKN1-206ENST00000586237 ADAMTS12P58397 1594 aa25.25■■□□□ 1.63
PKN1-206ENST00000586237 CHD1O14646 1710 aa25.23■■□□□ 1.63
PKN1-206ENST00000586237 SYNJ2O15056 1496 aa25.23■■□□□ 1.63
PKN1-206ENST00000586237 FHAD1B1AJZ9 1412 aa25.23■■□□□ 1.63
PKN1-206ENST00000586237 CARMIL1Q5VZK9 1371 aa25.2■■□□□ 1.63
PKN1-206ENST00000586237 CSRNP3Q8WYN3 585 aa25.19■■□□□ 1.62
PKN1-206ENST00000586237 OSCARQ8IYS5 282 aa25.17■■□□□ 1.62
PKN1-206ENST00000586237 CUL7Q14999 1698 aa25.16■■□□□ 1.62
PKN1-206ENST00000586237 EEA1Q15075 1411 aa25.15■■□□□ 1.62
PKN1-206ENST00000586237 GRIN2AQ12879 1464 aa25.14■■□□□ 1.61
PKN1-206ENST00000586237 RAPGEF2Q9Y4G8 1499 aa25.06■■□□□ 1.6
PKN1-206ENST00000586237 PRXQ9BXM0 1461 aa25.05■■□□□ 1.6
PKN1-206ENST00000586237 EHMT2Q96KQ7 1210 aa25.03■■□□□ 1.6
PKN1-206ENST00000586237 CEP170Q5SW79 1584 aa25.01■■□□□ 1.59
PKN1-206ENST00000586237 NUP160Q12769 1436 aa24.99■■□□□ 1.59
PKN1-206ENST00000586237 DNAJC5Q9H3Z4 198 aa24.94■■□□□ 1.58
PKN1-206ENST00000586237 CLASP1Q7Z460 1538 aa24.94■■□□□ 1.58
PKN1-206ENST00000586237 KIF21BO75037 1637 aa24.89■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms