RNA–Protein interactions for RNA: ENST00000586177.1

AP3D1-204, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

TSL 5

Gene AP3D1, Length 627 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-204ENST00000586177 NISCHQ9Y2I1 1504 aa40.77■■■■■ 4.12
AP3D1-204ENST00000586177 CCDC180Q9P1Z9 1646 aa36.02■■■■□ 3.36
AP3D1-204ENST00000586177 ABCC9O60706 1549 aa35.17■■■■□ 3.22
AP3D1-204ENST00000586177 DCAF8L2P0C7V8 631 aa34.18■■■■□ 3.06
AP3D1-204ENST00000586177 ZCCHC6Q5VYS8 1495 aaKnown RBP33.97■■■■□ 3.03
AP3D1-204ENST00000586177 NACADO15069 1562 aa33.89■■■■□ 3.02
AP3D1-204ENST00000586177 RB1CC1Q8TDY2 1594 aa33.87■■■■□ 3.01
AP3D1-204ENST00000586177 MYO15BQ96JP2 1530 aa33.75■■■□□ 2.99
AP3D1-204ENST00000586177 DCAF1Q9Y4B6 1507 aa33.7■■■□□ 2.99
AP3D1-204ENST00000586177 PABPN1Q86U42 306 aaKnown RBP eCLIP33.01■■■□□ 2.87
AP3D1-204ENST00000586177 UNC13AQ9UPW8 1703 aa32.98■■■□□ 2.87
AP3D1-204ENST00000586177 SCRIBQ14160 1630 aa32.97■■■□□ 2.87
AP3D1-204ENST00000586177 BICRAQ9NZM4 1560 aa32.82■■■□□ 2.84
AP3D1-204ENST00000586177 SHROOM4Q9ULL8 1493 aa32.48■■■□□ 2.79
AP3D1-204ENST00000586177 DNAJC5BQ9UF47 199 aa32.14■■■□□ 2.74
AP3D1-204ENST00000586177 EIF4G1Q04637 1599 aaKnown RBP31.94■■■□□ 2.7
AP3D1-204ENST00000586177 CECR2Q9BXF3 1484 aa31.77■■■□□ 2.68
AP3D1-204ENST00000586177 CC2D2AQ9P2K1 1620 aa31.75■■■□□ 2.67
AP3D1-204ENST00000586177 BAZ1AQ9NRL2 1556 aaPredicted RBP31.56■■■□□ 2.64
AP3D1-204ENST00000586177 SMARCA4P51532 1647 aa31.53■■■□□ 2.64
AP3D1-204ENST00000586177 MROH2BQ7Z745 1585 aa31.43■■■□□ 2.62
AP3D1-204ENST00000586177 ATAD2BQ9ULI0 1458 aa31.37■■■□□ 2.61
AP3D1-204ENST00000586177 NCAPD3P42695 1498 aa31.33■■■□□ 2.61
AP3D1-204ENST00000586177 SMARCA2P51531 1590 aa31.31■■■□□ 2.6
AP3D1-204ENST00000586177 PEG3Q9GZU2 1588 aa31.21■■■□□ 2.59
AP3D1-204ENST00000586177 RSF1Q96T23 1441 aaPredicted RBP31.2■■■□□ 2.59
AP3D1-204ENST00000586177 BAZ1BQ9UIG0 1483 aaKnown RBP31.12■■■□□ 2.57
AP3D1-204ENST00000586177 HMGXB3Q12766 1538 aa31.11■■■□□ 2.57
AP3D1-204ENST00000586177 WIZO95785 1651 aa31.06■■■□□ 2.56
AP3D1-204ENST00000586177 TOP2AP11388 1531 aaKnown RBP30.75■■■□□ 2.51
AP3D1-204ENST00000586177 SUPT5HO00267 1087 aaKnown RBP30.72■■■□□ 2.51
AP3D1-204ENST00000586177 NESP48681 1621 aa30.49■■■□□ 2.47
AP3D1-204ENST00000586177 CCDC88BA6NC98 1476 aa30.46■■■□□ 2.47
AP3D1-204ENST00000586177 CADPSQ9ULU8 1353 aa30.46■■■□□ 2.47
AP3D1-204ENST00000586177 LAMC3Q9Y6N6 1575 aa30.4■■■□□ 2.46
AP3D1-204ENST00000586177 ERCC6Q03468 1493 aa30.31■■■□□ 2.44
AP3D1-204ENST00000586177 CFTRP13569 1480 aa30.29■■■□□ 2.44
AP3D1-204ENST00000586177 PDS5BQ9NTI5 1447 aa30.28■■■□□ 2.44
AP3D1-204ENST00000586177 FANCD2Q9BXW9 1451 aa30.07■■■□□ 2.4
AP3D1-204ENST00000586177 KIF21AQ7Z4S6 1674 aa30.03■■■□□ 2.4
AP3D1-204ENST00000586177 CEP164Q9UPV0 1460 aa29.99■■■□□ 2.39
AP3D1-204ENST00000586177 MRC2Q9UBG0 1479 aa29.9■■■□□ 2.38
AP3D1-204ENST00000586177 PRDM2Q13029 1718 aa29.88■■■□□ 2.37
AP3D1-204ENST00000586177 THOC2Q8NI27 1593 aaKnown RBP29.87■■■□□ 2.37
AP3D1-204ENST00000586177 CUX2O14529 1486 aa29.85■■■□□ 2.37
AP3D1-204ENST00000586177 WDR62O43379 1518 aa29.75■■■□□ 2.35
AP3D1-204ENST00000586177 URB2Q14146 1524 aaKnown RBP29.74■■■□□ 2.35
AP3D1-204ENST00000586177 ABCC8Q09428 1581 aa29.64■■■□□ 2.33
AP3D1-204ENST00000586177 TOPBP1Q92547 1522 aa29.6■■■□□ 2.33
AP3D1-204ENST00000586177 DNMBPQ6XZF7 1577 aa29.56■■■□□ 2.32
AP3D1-204ENST00000586177 CUX1P39880 1505 aa29.46■■■□□ 2.31
AP3D1-204ENST00000586177 WRNQ14191 1432 aaPredicted RBP eCLIP29.41■■■□□ 2.3
AP3D1-204ENST00000586177 IFT140Q96RY7 1462 aa29.37■■■□□ 2.29
AP3D1-204ENST00000586177 POLA1P09884 1462 aaPredicted RBP29.36■■■□□ 2.29
AP3D1-204ENST00000586177 FGD5Q6ZNL6 1462 aa29.34■■■□□ 2.29
AP3D1-204ENST00000586177 SOGA1O94964 1423 aa29.32■■■□□ 2.28
AP3D1-204ENST00000586177 RAD54L2Q9Y4B4 1467 aa29.28■■■□□ 2.28
AP3D1-204ENST00000586177 SYNJ1O43426 1573 aa29.25■■■□□ 2.27
AP3D1-204ENST00000586177 TOP2BQ02880 1626 aa29.24■■■□□ 2.27
AP3D1-204ENST00000586177 ZNF608Q9ULD9 1512 aaPredicted RBP29.22■■■□□ 2.27
AP3D1-204ENST00000586177 TARBP1Q13395 1621 aaKnown RBP29.21■■■□□ 2.27
AP3D1-204ENST00000586177 BIVM-ERCC5R4GMW8 1640 aa29.2■■■□□ 2.26
AP3D1-204ENST00000586177 TDRD9Q8NDG6 1382 aaKnown RBP29.14■■■□□ 2.26
AP3D1-204ENST00000586177 AQRO60306 1485 aaKnown RBP eCLIP29.13■■■□□ 2.253e-6■■■■□ 21.7
AP3D1-204ENST00000586177 ABCA10Q8WWZ4 1543 aa29.05■■■□□ 2.24
AP3D1-204ENST00000586177 EIF4G3O43432 1585 aaKnown RBP29.03■■■□□ 2.24
AP3D1-204ENST00000586177 TRIM41Q8WV44 630 aa29■■■□□ 2.23
AP3D1-204ENST00000586177 WDR97A6NE52 1622 aa28.97■■■□□ 2.23
AP3D1-204ENST00000586177 GAPVD1Q14C86 1478 aa28.95■■■□□ 2.22
AP3D1-204ENST00000586177 GRIN2BQ13224 1484 aa28.91■■■□□ 2.22
AP3D1-204ENST00000586177 ABCA5Q8WWZ7 1642 aa28.85■■■□□ 2.21
AP3D1-204ENST00000586177 FBLN2P98095 1184 aa28.83■■■□□ 2.21
AP3D1-204ENST00000586177 SNAPC4Q5SXM2 1469 aa28.82■■■□□ 2.2
AP3D1-204ENST00000586177 OSCARQ8IYS5 282 aa28.8■■■□□ 2.2
AP3D1-204ENST00000586177 KIF27Q86VH2 1401 aa28.79■■■□□ 2.2
AP3D1-204ENST00000586177 CHIC1Q5VXU3 224 aa28.78■■■□□ 2.2
AP3D1-204ENST00000586177 MAGI1Q96QZ7 1491 aaPredicted RBP28.78■■■□□ 2.2
AP3D1-204ENST00000586177 CHMP7Q8WUX9 453 aaPredicted RBP28.77■■■□□ 2.2
AP3D1-204ENST00000586177 DNAJC5Q9H3Z4 198 aa28.76■■■□□ 2.19
AP3D1-204ENST00000586177 PBRM1Q86U86 1689 aa28.74■■■□□ 2.19
AP3D1-204ENST00000586177 ERICH3Q5RHP9 1530 aa28.7■■■□□ 2.19
AP3D1-204ENST00000586177 IGF1RP08069 1367 aa28.68■■■□□ 2.18
AP3D1-204ENST00000586177 SYNJ2O15056 1496 aa28.67■■■□□ 2.18
AP3D1-204ENST00000586177 FHAD1B1AJZ9 1412 aa28.63■■■□□ 2.17
AP3D1-204ENST00000586177 RUSC2Q8N2Y8 1516 aa28.6■■■□□ 2.17
AP3D1-204ENST00000586177 CHD1O14646 1710 aa28.59■■■□□ 2.17
AP3D1-204ENST00000586177 ADAMTS12P58397 1594 aa28.57■■■□□ 2.16
AP3D1-204ENST00000586177 CARMIL1Q5VZK9 1371 aa28.51■■■□□ 2.16
AP3D1-204ENST00000586177 GRIN2AQ12879 1464 aa28.51■■■□□ 2.15
AP3D1-204ENST00000586177 CUL7Q14999 1698 aa28.44■■■□□ 2.14
AP3D1-204ENST00000586177 CSRNP3Q8WYN3 585 aa28.42■■■□□ 2.14
AP3D1-204ENST00000586177 FAM9AQ8IZU1 332 aaPredicted RBP28.41■■■□□ 2.14
AP3D1-204ENST00000586177 EEA1Q15075 1411 aa28.38■■■□□ 2.13
AP3D1-204ENST00000586177 NUP160Q12769 1436 aa28.37■■■□□ 2.13
AP3D1-204ENST00000586177 CLASP1Q7Z460 1538 aa28.33■■■□□ 2.13
AP3D1-204ENST00000586177 RAPGEF2Q9Y4G8 1499 aa28.33■■■□□ 2.13
AP3D1-204ENST00000586177 CEP170Q5SW79 1584 aa28.33■■■□□ 2.12
AP3D1-204ENST00000586177 PRXQ9BXM0 1461 aa28.27■■■□□ 2.12
AP3D1-204ENST00000586177 JPH4Q96JJ6 628 aa28.21■■■□□ 2.11
AP3D1-204ENST00000586177 KIAA0586Q9BVV6 1533 aa28.2■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms