RNA–Protein interactions for RNA: ENST00000586043.5

CYTH1-204, Transcript of cytohesin 1, humanhuman

TSL 3

Gene CYTH1, Length 836 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH1-204ENST00000586043 NISCHQ9Y2I1 1504 aa22.98■■□□□ 1.27
CYTH1-204ENST00000586043 CCDC180Q9P1Z9 1646 aa20.27■□□□□ 0.84
CYTH1-204ENST00000586043 ABCC9O60706 1549 aa19.62■□□□□ 0.73
CYTH1-204ENST00000586043 ZCCHC6Q5VYS8 1495 aaKnown RBP19.16■□□□□ 0.66
CYTH1-204ENST00000586043 DCAF8L2P0C7V8 631 aa19.14■□□□□ 0.65
CYTH1-204ENST00000586043 NACADO15069 1562 aa19.04■□□□□ 0.64
CYTH1-204ENST00000586043 MYO15BQ96JP2 1530 aa19.03■□□□□ 0.64
CYTH1-204ENST00000586043 DCAF1Q9Y4B6 1507 aa19.03■□□□□ 0.64
CYTH1-204ENST00000586043 RB1CC1Q8TDY2 1594 aa18.98■□□□□ 0.63
CYTH1-204ENST00000586043 UNC13AQ9UPW8 1703 aa18.57■□□□□ 0.56
CYTH1-204ENST00000586043 SCRIBQ14160 1630 aa18.5■□□□□ 0.55
CYTH1-204ENST00000586043 PABPN1Q86U42 306 aaKnown RBP eCLIP18.43■□□□□ 0.54
CYTH1-204ENST00000586043 BICRAQ9NZM4 1560 aa18.42■□□□□ 0.54
CYTH1-204ENST00000586043 SHROOM4Q9ULL8 1493 aa18.27■□□□□ 0.52
CYTH1-204ENST00000586043 EIF4G1Q04637 1599 aaKnown RBP17.9■□□□□ 0.46
CYTH1-204ENST00000586043 CECR2Q9BXF3 1484 aa17.89■□□□□ 0.45
CYTH1-204ENST00000586043 DNAJC5BQ9UF47 199 aa17.89■□□□□ 0.45
CYTH1-204ENST00000586043 BAZ1AQ9NRL2 1556 aaPredicted RBP17.77■□□□□ 0.44
CYTH1-204ENST00000586043 CC2D2AQ9P2K1 1620 aa17.76■□□□□ 0.43
CYTH1-204ENST00000586043 SMARCA4P51532 1647 aa17.75■□□□□ 0.43
CYTH1-204ENST00000586043 MROH2BQ7Z745 1585 aa17.71■□□□□ 0.43
CYTH1-204ENST00000586043 RSF1Q96T23 1441 aaPredicted RBP17.63■□□□□ 0.41
CYTH1-204ENST00000586043 ATAD2BQ9ULI0 1458 aa17.63■□□□□ 0.41
CYTH1-204ENST00000586043 NCAPD3P42695 1498 aa17.6■□□□□ 0.41
CYTH1-204ENST00000586043 PEG3Q9GZU2 1588 aa17.6■□□□□ 0.41
CYTH1-204ENST00000586043 SMARCA2P51531 1590 aa17.58■□□□□ 0.41
CYTH1-204ENST00000586043 WIZO95785 1651 aa17.53■□□□□ 0.4
CYTH1-204ENST00000586043 HMGXB3Q12766 1538 aa17.47■□□□□ 0.39
CYTH1-204ENST00000586043 BAZ1BQ9UIG0 1483 aaKnown RBP17.46■□□□□ 0.39
CYTH1-204ENST00000586043 SUPT5HO00267 1087 aaKnown RBP17.37■□□□□ 0.37
CYTH1-204ENST00000586043 TOP2AP11388 1531 aaKnown RBP17.33■□□□□ 0.37
CYTH1-204ENST00000586043 CCDC88BA6NC98 1476 aa17.18■□□□□ 0.34
CYTH1-204ENST00000586043 CADPSQ9ULU8 1353 aa17.1■□□□□ 0.33
CYTH1-204ENST00000586043 NESP48681 1621 aa17.07■□□□□ 0.32
CYTH1-204ENST00000586043 LAMC3Q9Y6N6 1575 aa17.06■□□□□ 0.32
CYTH1-204ENST00000586043 CFTRP13569 1480 aa17.03■□□□□ 0.32
CYTH1-204ENST00000586043 PDS5BQ9NTI5 1447 aa16.94■□□□□ 0.3
CYTH1-204ENST00000586043 PRDM2Q13029 1718 aa16.87■□□□□ 0.29
CYTH1-204ENST00000586043 ERCC6Q03468 1493 aa16.86■□□□□ 0.29
CYTH1-204ENST00000586043 FANCD2Q9BXW9 1451 aa16.86■□□□□ 0.29
CYTH1-204ENST00000586043 KIF21AQ7Z4S6 1674 aa16.85■□□□□ 0.29
CYTH1-204ENST00000586043 CEP164Q9UPV0 1460 aa16.79■□□□□ 0.28
CYTH1-204ENST00000586043 MRC2Q9UBG0 1479 aa16.73■□□□□ 0.27
CYTH1-204ENST00000586043 THOC2Q8NI27 1593 aaKnown RBP16.72■□□□□ 0.27
CYTH1-204ENST00000586043 URB2Q14146 1524 aaKnown RBP16.68■□□□□ 0.26
CYTH1-204ENST00000586043 WDR62O43379 1518 aa16.66■□□□□ 0.26
CYTH1-204ENST00000586043 ABCC8Q09428 1581 aa16.66■□□□□ 0.26
CYTH1-204ENST00000586043 CUX2O14529 1486 aa16.62■□□□□ 0.25
CYTH1-204ENST00000586043 TOPBP1Q92547 1522 aa16.62■□□□□ 0.25
CYTH1-204ENST00000586043 DNMBPQ6XZF7 1577 aa16.61■□□□□ 0.25
CYTH1-204ENST00000586043 CUX1P39880 1505 aa16.59■□□□□ 0.25
CYTH1-204ENST00000586043 WRNQ14191 1432 aaPredicted RBP eCLIP16.58■□□□□ 0.24
CYTH1-204ENST00000586043 TOP2BQ02880 1626 aa16.51■□□□□ 0.23
CYTH1-204ENST00000586043 SYNJ1O43426 1573 aa16.51■□□□□ 0.23
CYTH1-204ENST00000586043 BIVM-ERCC5R4GMW8 1640 aa16.5■□□□□ 0.23
CYTH1-204ENST00000586043 POLA1P09884 1462 aaPredicted RBP16.49■□□□□ 0.23
CYTH1-204ENST00000586043 FGD5Q6ZNL6 1462 aa16.48■□□□□ 0.23
CYTH1-204ENST00000586043 SOGA1O94964 1423 aa16.47■□□□□ 0.23
CYTH1-204ENST00000586043 IFT140Q96RY7 1462 aa16.46■□□□□ 0.23
CYTH1-204ENST00000586043 RAD54L2Q9Y4B4 1467 aa16.44■□□□□ 0.22
CYTH1-204ENST00000586043 TARBP1Q13395 1621 aaKnown RBP16.42■□□□□ 0.22
CYTH1-204ENST00000586043 TRIM41Q8WV44 630 aa16.41■□□□□ 0.22
CYTH1-204ENST00000586043 CHIC1Q5VXU3 224 aa16.4■□□□□ 0.22
CYTH1-204ENST00000586043 ZNF608Q9ULD9 1512 aaPredicted RBP16.36■□□□□ 0.21
CYTH1-204ENST00000586043 ABCA10Q8WWZ4 1543 aa16.35■□□□□ 0.21
CYTH1-204ENST00000586043 TDRD9Q8NDG6 1382 aaKnown RBP16.34■□□□□ 0.21
CYTH1-204ENST00000586043 AQRO60306 1485 aaKnown RBP eCLIP16.33■□□□□ 0.27e-6■■□□□ 12.2
CYTH1-204ENST00000586043 WDR97A6NE52 1622 aa16.32■□□□□ 0.2
CYTH1-204ENST00000586043 EIF4G3O43432 1585 aaKnown RBP16.26■□□□□ 0.19
CYTH1-204ENST00000586043 GAPVD1Q14C86 1478 aa16.26■□□□□ 0.19
CYTH1-204ENST00000586043 ABCA5Q8WWZ7 1642 aa16.23■□□□□ 0.19
CYTH1-204ENST00000586043 KIF27Q86VH2 1401 aa16.21■□□□□ 0.19
CYTH1-204ENST00000586043 GRIN2BQ13224 1484 aa16.21■□□□□ 0.19
CYTH1-204ENST00000586043 RUSC2Q8N2Y8 1516 aa16.19■□□□□ 0.18
CYTH1-204ENST00000586043 IGF1RP08069 1367 aa16.18■□□□□ 0.18
CYTH1-204ENST00000586043 PBRM1Q86U86 1689 aa16.17■□□□□ 0.18
CYTH1-204ENST00000586043 ERICH3Q5RHP9 1530 aa16.15■□□□□ 0.18
CYTH1-204ENST00000586043 MAGI1Q96QZ7 1491 aaPredicted RBP16.14■□□□□ 0.17
CYTH1-204ENST00000586043 SNAPC4Q5SXM2 1469 aa16.13■□□□□ 0.17
CYTH1-204ENST00000586043 CHMP7Q8WUX9 453 aaPredicted RBP16.1■□□□□ 0.17
CYTH1-204ENST00000586043 CSRNP3Q8WYN3 585 aa16.09■□□□□ 0.17
CYTH1-204ENST00000586043 FBLN2P98095 1184 aa16.08■□□□□ 0.16
CYTH1-204ENST00000586043 FHAD1B1AJZ9 1412 aa16.08■□□□□ 0.16
CYTH1-204ENST00000586043 SYNJ2O15056 1496 aa16.08■□□□□ 0.16
CYTH1-204ENST00000586043 CARMIL1Q5VZK9 1371 aa16.07■□□□□ 0.16
CYTH1-204ENST00000586043 EEA1Q15075 1411 aa16.07■□□□□ 0.16
CYTH1-204ENST00000586043 OSCARQ8IYS5 282 aa16.06■□□□□ 0.16
CYTH1-204ENST00000586043 FAM9AQ8IZU1 332 aaPredicted RBP16.04■□□□□ 0.16
CYTH1-204ENST00000586043 ADAMTS12P58397 1594 aa16.04■□□□□ 0.16
CYTH1-204ENST00000586043 CHD1O14646 1710 aa16.03■□□□□ 0.16
CYTH1-204ENST00000586043 CUL7Q14999 1698 aa16.03■□□□□ 0.16
CYTH1-204ENST00000586043 GRIN2AQ12879 1464 aa15.99■□□□□ 0.15
CYTH1-204ENST00000586043 PRXQ9BXM0 1461 aa15.99■□□□□ 0.15
CYTH1-204ENST00000586043 RAPGEF2Q9Y4G8 1499 aa15.97■□□□□ 0.15
CYTH1-204ENST00000586043 NUP160Q12769 1436 aa15.94■□□□□ 0.14
CYTH1-204ENST00000586043 DNAJC5Q9H3Z4 198 aa15.91■□□□□ 0.14
CYTH1-204ENST00000586043 CEP170Q5SW79 1584 aa15.9■□□□□ 0.14
CYTH1-204ENST00000586043 CLASP1Q7Z460 1538 aa15.87■□□□□ 0.13
CYTH1-204ENST00000586043 KIF21BO75037 1637 aa15.86■□□□□ 0.13
CYTH1-204ENST00000586043 KIAA0586Q9BVV6 1533 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms