RNA–Protein interactions for RNA: ENST00000585920.1

DNMT1-205, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-205ENST00000585920 NISCHQ9Y2I1 1504 aa31.05■■■□□ 2.56
DNMT1-205ENST00000585920 AEBP2Q6ZN18 517 aaPredicted RBP30.24■■■□□ 2.43
DNMT1-205ENST00000585920 CHIC1Q5VXU3 224 aa30.13■■■□□ 2.41
DNMT1-205ENST00000585920 CCDC180Q9P1Z9 1646 aa27.39■■□□□ 1.98
DNMT1-205ENST00000585920 ABCC9O60706 1549 aa26.69■■□□□ 1.86
DNMT1-205ENST00000585920 PHF23Q9BUL5 403 aaPredicted RBP26.65■■□□□ 1.86
DNMT1-205ENST00000585920 DCAF8L2P0C7V8 631 aa26.04■■□□□ 1.76
DNMT1-205ENST00000585920 ZCCHC6Q5VYS8 1495 aaKnown RBP25.89■■□□□ 1.73
DNMT1-205ENST00000585920 NACADO15069 1562 aa25.77■■□□□ 1.72
DNMT1-205ENST00000585920 RB1CC1Q8TDY2 1594 aa25.73■■□□□ 1.71
DNMT1-205ENST00000585920 MYO15BQ96JP2 1530 aa25.68■■□□□ 1.7
DNMT1-205ENST00000585920 DCAF1Q9Y4B6 1507 aa25.68■■□□□ 1.7
DNMT1-205ENST00000585920 SENP3Q9H4L4 574 aaPredicted RBP25.42■■□□□ 1.66
DNMT1-205ENST00000585920 SCRIBQ14160 1630 aa25.08■■□□□ 1.6
DNMT1-205ENST00000585920 PABPN1Q86U42 306 aaKnown RBP eCLIP25.06■■□□□ 1.6
DNMT1-205ENST00000585920 UNC13AQ9UPW8 1703 aa25.02■■□□□ 1.6
DNMT1-205ENST00000585920 BICRAQ9NZM4 1560 aa24.9■■□□□ 1.58
DNMT1-205ENST00000585920 SHROOM4Q9ULL8 1493 aa24.79■■□□□ 1.56
DNMT1-205ENST00000585920 PLPPR3Q6T4P5 718 aa24.73■■□□□ 1.55
DNMT1-205ENST00000585920 DNAJC5BQ9UF47 199 aa24.29■■□□□ 1.48
DNMT1-205ENST00000585920 EIF4G1Q04637 1599 aaKnown RBP24.25■■□□□ 1.47
DNMT1-205ENST00000585920 CECR2Q9BXF3 1484 aa24.18■■□□□ 1.46
DNMT1-205ENST00000585920 CC2D2AQ9P2K1 1620 aa24.09■■□□□ 1.45
DNMT1-205ENST00000585920 BAZ1AQ9NRL2 1556 aaPredicted RBP24.04■■□□□ 1.44
DNMT1-205ENST00000585920 SMARCA4P51532 1647 aa23.99■■□□□ 1.43
DNMT1-205ENST00000585920 MROH2BQ7Z745 1585 aa23.94■■□□□ 1.42
DNMT1-205ENST00000585920 ATAD2BQ9ULI0 1458 aa23.86■■□□□ 1.41
DNMT1-205ENST00000585920 SMARCA2P51531 1590 aa23.82■■□□□ 1.4
DNMT1-205ENST00000585920 NCAPD3P42695 1498 aa23.81■■□□□ 1.4
DNMT1-205ENST00000585920 RSF1Q96T23 1441 aaPredicted RBP23.8■■□□□ 1.4
DNMT1-205ENST00000585920 PEG3Q9GZU2 1588 aa23.74■■□□□ 1.39
DNMT1-205ENST00000585920 BAZ1BQ9UIG0 1483 aaKnown RBP23.68■■□□□ 1.38
DNMT1-205ENST00000585920 WIZO95785 1651 aa23.66■■□□□ 1.38
DNMT1-205ENST00000585920 HMGXB3Q12766 1538 aa23.65■■□□□ 1.38
DNMT1-205ENST00000585920 FOXD1Q16676 465 aa23.6■■□□□ 1.37
DNMT1-205ENST00000585920 SUPT5HO00267 1087 aaKnown RBP23.52■■□□□ 1.36
DNMT1-205ENST00000585920 TOP2AP11388 1531 aaKnown RBP23.43■■□□□ 1.34
DNMT1-205ENST00000585920 ADRA2BP18089 450 aa23.3■■□□□ 1.32
DNMT1-205ENST00000585920 PPP6R1Q9UPN7 881 aa23.3■■□□□ 1.32
DNMT1-205ENST00000585920 CCDC88BA6NC98 1476 aa23.22■■□□□ 1.31
DNMT1-205ENST00000585920 CADPSQ9ULU8 1353 aa23.17■■□□□ 1.3
DNMT1-205ENST00000585920 NESP48681 1621 aa23.14■■□□□ 1.29
DNMT1-205ENST00000585920 LAMC3Q9Y6N6 1575 aa23.1■■□□□ 1.29
DNMT1-205ENST00000585920 CFTRP13569 1480 aa23.05■■□□□ 1.28
DNMT1-205ENST00000585920 PDS5BQ9NTI5 1447 aa23.01■■□□□ 1.27
DNMT1-205ENST00000585920 ERCC6Q03468 1493 aa23■■□□□ 1.27
DNMT1-205ENST00000585920 FANCD2Q9BXW9 1451 aa22.87■■□□□ 1.25
DNMT1-205ENST00000585920 CEP164Q9UPV0 1460 aa22.81■■□□□ 1.24
DNMT1-205ENST00000585920 KIF21AQ7Z4S6 1674 aa22.78■■□□□ 1.24
DNMT1-205ENST00000585920 PRDM2Q13029 1718 aa22.73■■□□□ 1.23
DNMT1-205ENST00000585920 MRC2Q9UBG0 1479 aa22.72■■□□□ 1.23
DNMT1-205ENST00000585920 THOC2Q8NI27 1593 aaKnown RBP22.64■■□□□ 1.22
DNMT1-205ENST00000585920 CUX2O14529 1486 aa22.6■■□□□ 1.21
DNMT1-205ENST00000585920 URB2Q14146 1524 aaKnown RBP22.59■■□□□ 1.21
DNMT1-205ENST00000585920 WDR62O43379 1518 aa22.58■■□□□ 1.21
DNMT1-205ENST00000585920 ABCC8Q09428 1581 aa22.56■■□□□ 1.2
DNMT1-205ENST00000585920 TOPBP1Q92547 1522 aa22.52■■□□□ 1.19
DNMT1-205ENST00000585920 DNMBPQ6XZF7 1577 aa22.48■■□□□ 1.19
DNMT1-205ENST00000585920 WRNQ14191 1432 aaPredicted RBP eCLIP22.44■■□□□ 1.18
DNMT1-205ENST00000585920 CUX1P39880 1505 aa22.42■■□□□ 1.18
DNMT1-205ENST00000585920 PIAS4Q8N2W9 510 aaPredicted RBP22.38■■□□□ 1.17
DNMT1-205ENST00000585920 POLA1P09884 1462 aaPredicted RBP22.34■■□□□ 1.17
DNMT1-205ENST00000585920 FGD5Q6ZNL6 1462 aa22.33■■□□□ 1.16
DNMT1-205ENST00000585920 IFT140Q96RY7 1462 aa22.33■■□□□ 1.16
DNMT1-205ENST00000585920 SOGA1O94964 1423 aa22.32■■□□□ 1.16
DNMT1-205ENST00000585920 SYNJ1O43426 1573 aa22.29■■□□□ 1.16
DNMT1-205ENST00000585920 TOP2BQ02880 1626 aa22.29■■□□□ 1.16
DNMT1-205ENST00000585920 RAD54L2Q9Y4B4 1467 aa22.28■■□□□ 1.16
DNMT1-205ENST00000585920 KCNA4P22459 653 aa22.25■■□□□ 1.15
DNMT1-205ENST00000585920 BIVM-ERCC5R4GMW8 1640 aa22.24■■□□□ 1.15
DNMT1-205ENST00000585920 TRIM41Q8WV44 630 aa22.21■■□□□ 1.15
DNMT1-205ENST00000585920 TARBP1Q13395 1621 aaKnown RBP22.2■■□□□ 1.14
DNMT1-205ENST00000585920 ZNF608Q9ULD9 1512 aaPredicted RBP22.19■■□□□ 1.14
DNMT1-205ENST00000585920 TDRD9Q8NDG6 1382 aaKnown RBP22.17■■□□□ 1.14
DNMT1-205ENST00000585920 AQRO60306 1485 aaKnown RBP eCLIP22.15■■□□□ 1.144e-13■■□□□ 13.5
DNMT1-205ENST00000585920 ABCA10Q8WWZ4 1543 aa22.12■■□□□ 1.13
DNMT1-205ENST00000585920 EIF4G3O43432 1585 aaKnown RBP22.05■■□□□ 1.12
DNMT1-205ENST00000585920 GAPVD1Q14C86 1478 aa22.03■■□□□ 1.12
DNMT1-205ENST00000585920 WDR97A6NE52 1622 aa22.03■■□□□ 1.12
DNMT1-205ENST00000585920 GRIN2BQ13224 1484 aa21.99■■□□□ 1.11
DNMT1-205ENST00000585920 KIF27Q86VH2 1401 aa21.97■■□□□ 1.11
DNMT1-205ENST00000585920 ABCA5Q8WWZ7 1642 aa21.95■■□□□ 1.1
DNMT1-205ENST00000585920 FBLN2P98095 1184 aa21.93■■□□□ 1.1
DNMT1-205ENST00000585920 PPP4R3CPQ6ZMV5 832 aa21.93■■□□□ 1.1
DNMT1-205ENST00000585920 SNAPC4Q5SXM2 1469 aa21.9■■□□□ 1.1
DNMT1-205ENST00000585920 CHMP7Q8WUX9 453 aaPredicted RBP21.89■■□□□ 1.09
DNMT1-205ENST00000585920 MAGI1Q96QZ7 1491 aaPredicted RBP21.88■■□□□ 1.09
DNMT1-205ENST00000585920 IGF1RP08069 1367 aa21.87■■□□□ 1.09
DNMT1-205ENST00000585920 ERICH3Q5RHP9 1530 aa21.85■■□□□ 1.09
DNMT1-205ENST00000585920 PBRM1Q86U86 1689 aa21.85■■□□□ 1.09
DNMT1-205ENST00000585920 OSCARQ8IYS5 282 aa21.84■■□□□ 1.09
DNMT1-205ENST00000585920 RUSC2Q8N2Y8 1516 aa21.82■■□□□ 1.08
DNMT1-205ENST00000585920 SYNJ2O15056 1496 aa21.81■■□□□ 1.08
DNMT1-205ENST00000585920 FHAD1B1AJZ9 1412 aa21.8■■□□□ 1.08
DNMT1-205ENST00000585920 FAM9AQ8IZU1 332 aaPredicted RBP21.75■■□□□ 1.07
DNMT1-205ENST00000585920 CARMIL1Q5VZK9 1371 aa21.74■■□□□ 1.07
DNMT1-205ENST00000585920 CSRNP3Q8WYN3 585 aa21.73■■□□□ 1.07
DNMT1-205ENST00000585920 ADAMTS12P58397 1594 aa21.73■■□□□ 1.07
DNMT1-205ENST00000585920 EEA1Q15075 1411 aa21.72■■□□□ 1.07
DNMT1-205ENST00000585920 DNAJC5Q9H3Z4 198 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms