RNA–Protein interactions for RNA: ENST00000585608.5

PRKAR1A-207, Transcript of protein kinase cAMP-dependent type I regulatory subunit alpha, humanhuman

TSL 3

Gene PRKAR1A, Length 848 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAR1A-207ENST00000585608 NISCHQ9Y2I1 1504 aa43.43■■■■■ 4.54
PRKAR1A-207ENST00000585608 CCDC180Q9P1Z9 1646 aa38.52■■■■□ 3.76
PRKAR1A-207ENST00000585608 ABCC9O60706 1549 aa37.36■■■■□ 3.57
PRKAR1A-207ENST00000585608 ZCCHC6Q5VYS8 1495 aaKnown RBP36.21■■■■□ 3.39
PRKAR1A-207ENST00000585608 DCAF8L2P0C7V8 631 aa36.2■■■■□ 3.39
PRKAR1A-207ENST00000585608 NACADO15069 1562 aa36.16■■■■□ 3.38
PRKAR1A-207ENST00000585608 RB1CC1Q8TDY2 1594 aa36.12■■■■□ 3.37
PRKAR1A-207ENST00000585608 MYO15BQ96JP2 1530 aa36.04■■■■□ 3.36
PRKAR1A-207ENST00000585608 DCAF1Q9Y4B6 1507 aa35.98■■■■□ 3.35
PRKAR1A-207ENST00000585608 UNC13AQ9UPW8 1703 aa35.31■■■■□ 3.24
PRKAR1A-207ENST00000585608 SCRIBQ14160 1630 aa35.11■■■■□ 3.21
PRKAR1A-207ENST00000585608 BICRAQ9NZM4 1560 aa34.97■■■■□ 3.19
PRKAR1A-207ENST00000585608 PABPN1Q86U42 306 aaKnown RBP eCLIP34.97■■■■□ 3.19
PRKAR1A-207ENST00000585608 SHROOM4Q9ULL8 1493 aa34.69■■■■□ 3.14
PRKAR1A-207ENST00000585608 EIF4G1Q04637 1599 aaKnown RBP34.05■■■■□ 3.04
PRKAR1A-207ENST00000585608 DNAJC5BQ9UF47 199 aa34.03■■■■□ 3.04
PRKAR1A-207ENST00000585608 CC2D2AQ9P2K1 1620 aa33.84■■■■□ 3.01
PRKAR1A-207ENST00000585608 CECR2Q9BXF3 1484 aa33.76■■■□□ 2.99
PRKAR1A-207ENST00000585608 BAZ1AQ9NRL2 1556 aaPredicted RBP33.65■■■□□ 2.98
PRKAR1A-207ENST00000585608 SMARCA4P51532 1647 aa33.64■■■□□ 2.98
PRKAR1A-207ENST00000585608 MROH2BQ7Z745 1585 aa33.44■■■□□ 2.94
PRKAR1A-207ENST00000585608 SMARCA2P51531 1590 aa33.39■■■□□ 2.94
PRKAR1A-207ENST00000585608 ATAD2BQ9ULI0 1458 aa33.38■■■□□ 2.93
PRKAR1A-207ENST00000585608 NCAPD3P42695 1498 aa33.35■■■□□ 2.93
PRKAR1A-207ENST00000585608 PEG3Q9GZU2 1588 aa33.32■■■□□ 2.92
PRKAR1A-207ENST00000585608 HMGXB3Q12766 1538 aa33.2■■■□□ 2.91
PRKAR1A-207ENST00000585608 RSF1Q96T23 1441 aaPredicted RBP33.18■■■□□ 2.9
PRKAR1A-207ENST00000585608 BAZ1BQ9UIG0 1483 aaKnown RBP33.13■■■□□ 2.89
PRKAR1A-207ENST00000585608 WIZO95785 1651 aa33.11■■■□□ 2.89
PRKAR1A-207ENST00000585608 TOP2AP11388 1531 aaKnown RBP32.78■■■□□ 2.84
PRKAR1A-207ENST00000585608 SUPT5HO00267 1087 aaKnown RBP32.56■■■□□ 2.8
PRKAR1A-207ENST00000585608 LAMC3Q9Y6N6 1575 aa32.44■■■□□ 2.78
PRKAR1A-207ENST00000585608 NESP48681 1621 aa32.4■■■□□ 2.78
PRKAR1A-207ENST00000585608 CCDC88BA6NC98 1476 aa32.4■■■□□ 2.78
PRKAR1A-207ENST00000585608 CADPSQ9ULU8 1353 aa32.39■■■□□ 2.78
PRKAR1A-207ENST00000585608 CFTRP13569 1480 aa32.24■■■□□ 2.75
PRKAR1A-207ENST00000585608 ERCC6Q03468 1493 aa32.23■■■□□ 2.75
PRKAR1A-207ENST00000585608 PDS5BQ9NTI5 1447 aa32.22■■■□□ 2.75
PRKAR1A-207ENST00000585608 PRDM2Q13029 1718 aa32.08■■■□□ 2.73
PRKAR1A-207ENST00000585608 KIF21AQ7Z4S6 1674 aa32.08■■■□□ 2.73
PRKAR1A-207ENST00000585608 FANCD2Q9BXW9 1451 aa31.99■■■□□ 2.71
PRKAR1A-207ENST00000585608 CEP164Q9UPV0 1460 aa31.94■■■□□ 2.7
PRKAR1A-207ENST00000585608 THOC2Q8NI27 1593 aaKnown RBP31.87■■■□□ 2.69
PRKAR1A-207ENST00000585608 MRC2Q9UBG0 1479 aa31.84■■■□□ 2.69
PRKAR1A-207ENST00000585608 CUX2O14529 1486 aa31.8■■■□□ 2.68
PRKAR1A-207ENST00000585608 WDR62O43379 1518 aa31.71■■■□□ 2.67
PRKAR1A-207ENST00000585608 URB2Q14146 1524 aaKnown RBP31.64■■■□□ 2.66
PRKAR1A-207ENST00000585608 ABCC8Q09428 1581 aa31.6■■■□□ 2.65
PRKAR1A-207ENST00000585608 DNMBPQ6XZF7 1577 aa31.51■■■□□ 2.64
PRKAR1A-207ENST00000585608 TOPBP1Q92547 1522 aa31.51■■■□□ 2.63
PRKAR1A-207ENST00000585608 CUX1P39880 1505 aa31.36■■■□□ 2.61
PRKAR1A-207ENST00000585608 WRNQ14191 1432 aaPredicted RBP eCLIP31.3■■■□□ 2.6
PRKAR1A-207ENST00000585608 IFT140Q96RY7 1462 aa31.27■■■□□ 2.6
PRKAR1A-207ENST00000585608 POLA1P09884 1462 aaPredicted RBP31.26■■■□□ 2.59
PRKAR1A-207ENST00000585608 FGD5Q6ZNL6 1462 aa31.22■■■□□ 2.59
PRKAR1A-207ENST00000585608 TOP2BQ02880 1626 aa31.2■■■□□ 2.58
PRKAR1A-207ENST00000585608 BIVM-ERCC5R4GMW8 1640 aa31.2■■■□□ 2.58
PRKAR1A-207ENST00000585608 SOGA1O94964 1423 aa31.16■■■□□ 2.58
PRKAR1A-207ENST00000585608 SYNJ1O43426 1573 aa31.16■■■□□ 2.58
PRKAR1A-207ENST00000585608 TARBP1Q13395 1621 aaKnown RBP31.15■■■□□ 2.58
PRKAR1A-207ENST00000585608 RAD54L2Q9Y4B4 1467 aa31.11■■■□□ 2.57
PRKAR1A-207ENST00000585608 ZNF608Q9ULD9 1512 aaPredicted RBP31.05■■■□□ 2.56
PRKAR1A-207ENST00000585608 WDR97A6NE52 1622 aa30.98■■■□□ 2.55
PRKAR1A-207ENST00000585608 EIF4G3O43432 1585 aaKnown RBP30.96■■■□□ 2.55
PRKAR1A-207ENST00000585608 ABCA10Q8WWZ4 1543 aa30.95■■■□□ 2.55
PRKAR1A-207ENST00000585608 AQRO60306 1485 aaKnown RBP eCLIP30.94■■■□□ 2.542e-6■■■■■ 37.8
PRKAR1A-207ENST00000585608 TDRD9Q8NDG6 1382 aaKnown RBP30.93■■■□□ 2.54
PRKAR1A-207ENST00000585608 GAPVD1Q14C86 1478 aa30.81■■■□□ 2.52
PRKAR1A-207ENST00000585608 ABCA5Q8WWZ7 1642 aa30.79■■■□□ 2.52
PRKAR1A-207ENST00000585608 TRIM41Q8WV44 630 aa30.78■■■□□ 2.52
PRKAR1A-207ENST00000585608 GRIN2BQ13224 1484 aa30.76■■■□□ 2.52
PRKAR1A-207ENST00000585608 PBRM1Q86U86 1689 aa30.73■■■□□ 2.51
PRKAR1A-207ENST00000585608 MAGI1Q96QZ7 1491 aaPredicted RBP30.66■■■□□ 2.5
PRKAR1A-207ENST00000585608 SNAPC4Q5SXM2 1469 aa30.65■■■□□ 2.5
PRKAR1A-207ENST00000585608 KIF27Q86VH2 1401 aa30.64■■■□□ 2.5
PRKAR1A-207ENST00000585608 ERICH3Q5RHP9 1530 aa30.6■■■□□ 2.49
PRKAR1A-207ENST00000585608 OSCARQ8IYS5 282 aa30.57■■■□□ 2.48
PRKAR1A-207ENST00000585608 FBLN2P98095 1184 aa30.55■■■□□ 2.48
PRKAR1A-207ENST00000585608 CHIC1Q5VXU3 224 aa30.55■■■□□ 2.48
PRKAR1A-207ENST00000585608 CHD1O14646 1710 aa30.55■■■□□ 2.48
PRKAR1A-207ENST00000585608 SYNJ2O15056 1496 aa30.53■■■□□ 2.48
PRKAR1A-207ENST00000585608 CHMP7Q8WUX9 453 aaPredicted RBP30.53■■■□□ 2.48
PRKAR1A-207ENST00000585608 DNAJC5Q9H3Z4 198 aa30.51■■■□□ 2.47
PRKAR1A-207ENST00000585608 FHAD1B1AJZ9 1412 aa30.47■■■□□ 2.47
PRKAR1A-207ENST00000585608 ADAMTS12P58397 1594 aa30.46■■■□□ 2.47
PRKAR1A-207ENST00000585608 IGF1RP08069 1367 aa30.46■■■□□ 2.47
PRKAR1A-207ENST00000585608 CUL7Q14999 1698 aa30.39■■■□□ 2.45
PRKAR1A-207ENST00000585608 RUSC2Q8N2Y8 1516 aa30.37■■■□□ 2.45
PRKAR1A-207ENST00000585608 GRIN2AQ12879 1464 aa30.36■■■□□ 2.45
PRKAR1A-207ENST00000585608 CARMIL1Q5VZK9 1371 aa30.3■■■□□ 2.44
PRKAR1A-207ENST00000585608 EEA1Q15075 1411 aa30.25■■■□□ 2.43
PRKAR1A-207ENST00000585608 NUP160Q12769 1436 aa30.21■■■□□ 2.43
PRKAR1A-207ENST00000585608 CLASP1Q7Z460 1538 aa30.19■■■□□ 2.42
PRKAR1A-207ENST00000585608 CEP170Q5SW79 1584 aa30.17■■■□□ 2.42
PRKAR1A-207ENST00000585608 CSRNP3Q8WYN3 585 aa30.17■■■□□ 2.42
PRKAR1A-207ENST00000585608 RAPGEF2Q9Y4G8 1499 aa30.15■■■□□ 2.42
PRKAR1A-207ENST00000585608 PRXQ9BXM0 1461 aa30.09■■■□□ 2.41
PRKAR1A-207ENST00000585608 FAM9AQ8IZU1 332 aaPredicted RBP30.08■■■□□ 2.41
PRKAR1A-207ENST00000585608 KIAA0586Q9BVV6 1533 aa30.01■■■□□ 2.4
PRKAR1A-207ENST00000585608 ARHGEF11O15085 1522 aa30■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms