RNA–Protein interactions for RNA: ENST00000585497.1

TXNL1-202, Transcript of thioredoxin like 1, humanhuman

TSL 1 (best)

Gene TXNL1, Length 1,647 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TXNL1-202ENST00000585497 NISCHQ9Y2I1 1504 aa22.61■■□□□ 1.21
TXNL1-202ENST00000585497 CCDC180Q9P1Z9 1646 aa19.87■□□□□ 0.77
TXNL1-202ENST00000585497 POTEDQ86YR6 584 aa19.64■□□□□ 0.73
TXNL1-202ENST00000585497 AEBP2Q6ZN18 517 aaPredicted RBP19.43■□□□□ 0.7
TXNL1-202ENST00000585497 ZCCHC6Q5VYS8 1495 aaKnown RBP18.95■□□□□ 0.62
TXNL1-202ENST00000585497 ABCC9O60706 1549 aa18.84■□□□□ 0.61
TXNL1-202ENST00000585497 DCAF1Q9Y4B6 1507 aa18.76■□□□□ 0.59
TXNL1-202ENST00000585497 MYO15BQ96JP2 1530 aa18.64■□□□□ 0.57
TXNL1-202ENST00000585497 DCAF8L2P0C7V8 631 aa18.62■□□□□ 0.57
TXNL1-202ENST00000585497 NACADO15069 1562 aa18.54■□□□□ 0.56
TXNL1-202ENST00000585497 CHIC1Q5VXU3 224 aa18.43■□□□□ 0.54
TXNL1-202ENST00000585497 RB1CC1Q8TDY2 1594 aa18.41■□□□□ 0.54
TXNL1-202ENST00000585497 SHROOM4Q9ULL8 1493 aa18.16■□□□□ 0.5
TXNL1-202ENST00000585497 SCRIBQ14160 1630 aa18.12■□□□□ 0.49
TXNL1-202ENST00000585497 UNC13AQ9UPW8 1703 aa18.01■□□□□ 0.47
TXNL1-202ENST00000585497 BICRAQ9NZM4 1560 aa17.82■□□□□ 0.44
TXNL1-202ENST00000585497 PABPN1Q86U42 306 aaKnown RBP eCLIP17.7■□□□□ 0.42
TXNL1-202ENST00000585497 CECR2Q9BXF3 1484 aa17.52■□□□□ 0.39
TXNL1-202ENST00000585497 BAZ1AQ9NRL2 1556 aaPredicted RBP17.49■□□□□ 0.39
TXNL1-202ENST00000585497 RSF1Q96T23 1441 aaPredicted RBP17.43■□□□□ 0.38
TXNL1-202ENST00000585497 MROH2BQ7Z745 1585 aa17.42■□□□□ 0.38
TXNL1-202ENST00000585497 SMARCA4P51532 1647 aa17.42■□□□□ 0.38
TXNL1-202ENST00000585497 SUPT5HO00267 1087 aaKnown RBP17.39■□□□□ 0.38
TXNL1-202ENST00000585497 EIF4G1Q04637 1599 aaKnown RBP17.3■□□□□ 0.36
TXNL1-202ENST00000585497 WIZO95785 1651 aa17.26■□□□□ 0.35
TXNL1-202ENST00000585497 PEG3Q9GZU2 1588 aa17.26■□□□□ 0.35
TXNL1-202ENST00000585497 SENP3Q9H4L4 574 aaPredicted RBP17.24■□□□□ 0.35
TXNL1-202ENST00000585497 SMARCA2P51531 1590 aa17.2■□□□□ 0.34
TXNL1-202ENST00000585497 ATAD2BQ9ULI0 1458 aa17.18■□□□□ 0.34
TXNL1-202ENST00000585497 TOP2AP11388 1531 aaKnown RBP17.12■□□□□ 0.33
TXNL1-202ENST00000585497 NCAPD3P42695 1498 aa17.1■□□□□ 0.33
TXNL1-202ENST00000585497 CC2D2AQ9P2K1 1620 aa17.09■□□□□ 0.33
TXNL1-202ENST00000585497 HMGXB3Q12766 1538 aa17.07■□□□□ 0.32
TXNL1-202ENST00000585497 BAZ1BQ9UIG0 1483 aaKnown RBP17.06■□□□□ 0.32
TXNL1-202ENST00000585497 CCDC88BA6NC98 1476 aa16.91■□□□□ 0.3
TXNL1-202ENST00000585497 DNAJC5BQ9UF47 199 aa16.78■□□□□ 0.28
TXNL1-202ENST00000585497 CFTRP13569 1480 aa16.64■□□□□ 0.25
TXNL1-202ENST00000585497 CADPSQ9ULU8 1353 aa16.62■□□□□ 0.25
TXNL1-202ENST00000585497 PRDM2Q13029 1718 aa16.6■□□□□ 0.25
TXNL1-202ENST00000585497 LAMC3Q9Y6N6 1575 aa16.56■□□□□ 0.24
TXNL1-202ENST00000585497 PHF23Q9BUL5 403 aaPredicted RBP16.54■□□□□ 0.24
TXNL1-202ENST00000585497 NESP48681 1621 aa16.47■□□□□ 0.23
TXNL1-202ENST00000585497 ABCC8Q09428 1581 aa16.44■□□□□ 0.22
TXNL1-202ENST00000585497 TRIM41Q8WV44 630 aa16.43■□□□□ 0.22
TXNL1-202ENST00000585497 PDS5BQ9NTI5 1447 aa16.43■□□□□ 0.22
TXNL1-202ENST00000585497 WRNQ14191 1432 aaPredicted RBP eCLIP16.42■□□□□ 0.22
TXNL1-202ENST00000585497 FANCD2Q9BXW9 1451 aa16.42■□□□□ 0.22
TXNL1-202ENST00000585497 CEP164Q9UPV0 1460 aa16.35■□□□□ 0.21
TXNL1-202ENST00000585497 TOP2BQ02880 1626 aa16.34■□□□□ 0.21
TXNL1-202ENST00000585497 BIVM-ERCC5R4GMW8 1640 aa16.33■□□□□ 0.21
TXNL1-202ENST00000585497 SYNJ1O43426 1573 aa16.33■□□□□ 0.2
TXNL1-202ENST00000585497 KIF21AQ7Z4S6 1674 aa16.32■□□□□ 0.2
TXNL1-202ENST00000585497 CUX1P39880 1505 aa16.31■□□□□ 0.2
TXNL1-202ENST00000585497 DNMBPQ6XZF7 1577 aa16.27■□□□□ 0.19
TXNL1-202ENST00000585497 MSH5O43196 834 aa16.26■□□□□ 0.19
TXNL1-202ENST00000585497 TOPBP1Q92547 1522 aa16.23■□□□□ 0.19
TXNL1-202ENST00000585497 URB2Q14146 1524 aaKnown RBP16.22■□□□□ 0.19
TXNL1-202ENST00000585497 MRC2Q9UBG0 1479 aa16.21■□□□□ 0.19
TXNL1-202ENST00000585497 ERCC6Q03468 1493 aa16.2■□□□□ 0.18
TXNL1-202ENST00000585497 FGD5Q6ZNL6 1462 aa16.16■□□□□ 0.18
TXNL1-202ENST00000585497 FOXD1Q16676 465 aa16.15■□□□□ 0.18
TXNL1-202ENST00000585497 EEA1Q15075 1411 aa16.14■□□□□ 0.17
TXNL1-202ENST00000585497 WDR62O43379 1518 aa16.14■□□□□ 0.17
TXNL1-202ENST00000585497 POLA1P09884 1462 aaPredicted RBP16.12■□□□□ 0.17
TXNL1-202ENST00000585497 THOC2Q8NI27 1593 aaKnown RBP16.11■□□□□ 0.17
TXNL1-202ENST00000585497 SOGA1O94964 1423 aa16.1■□□□□ 0.17
TXNL1-202ENST00000585497 ABCA10Q8WWZ4 1543 aa16.05■□□□□ 0.16
TXNL1-202ENST00000585497 KIF27Q86VH2 1401 aa16.04■□□□□ 0.16
TXNL1-202ENST00000585497 RUSC2Q8N2Y8 1516 aa16.04■□□□□ 0.16
TXNL1-202ENST00000585497 FAM9AQ8IZU1 332 aaPredicted RBP16.04■□□□□ 0.16
TXNL1-202ENST00000585497 RAD54L2Q9Y4B4 1467 aa16.03■□□□□ 0.16
TXNL1-202ENST00000585497 CUX2O14529 1486 aa16.02■□□□□ 0.16
TXNL1-202ENST00000585497 CSRNP3Q8WYN3 585 aa16.01■□□□□ 0.15
TXNL1-202ENST00000585497 WDR97A6NE52 1622 aa16.01■□□□□ 0.15
TXNL1-202ENST00000585497 TARBP1Q13395 1621 aaKnown RBP16.01■□□□□ 0.15
TXNL1-202ENST00000585497 IFT140Q96RY7 1462 aa15.99■□□□□ 0.15
TXNL1-202ENST00000585497 ABCA5Q8WWZ7 1642 aa15.93■□□□□ 0.14
TXNL1-202ENST00000585497 KIF21BO75037 1637 aa15.91■□□□□ 0.14
TXNL1-202ENST00000585497 IGF1RP08069 1367 aa15.9■□□□□ 0.14
TXNL1-202ENST00000585497 GAPVD1Q14C86 1478 aa15.9■□□□□ 0.14
TXNL1-202ENST00000585497 TDRD9Q8NDG6 1382 aaKnown RBP15.9■□□□□ 0.14
TXNL1-202ENST00000585497 LOC105371045A0A1W2PR82 267 aa15.89■□□□□ 0.13
TXNL1-202ENST00000585497 PRXQ9BXM0 1461 aa15.88■□□□□ 0.13
TXNL1-202ENST00000585497 ERICH3Q5RHP9 1530 aa15.88■□□□□ 0.13
TXNL1-202ENST00000585497 GOLGA3Q08378 1498 aa15.86■□□□□ 0.13
TXNL1-202ENST00000585497 CUL7Q14999 1698 aa15.84■□□□□ 0.13
TXNL1-202ENST00000585497 ZNF608Q9ULD9 1512 aaPredicted RBP15.84■□□□□ 0.13
TXNL1-202ENST00000585497 PBRM1Q86U86 1689 aa15.83■□□□□ 0.13
TXNL1-202ENST00000585497 AQRO60306 1485 aaKnown RBP eCLIP15.83■□□□□ 0.12
TXNL1-202ENST00000585497 CARMIL1Q5VZK9 1371 aa15.82■□□□□ 0.12
TXNL1-202ENST00000585497 GRIN2BQ13224 1484 aa15.82■□□□□ 0.12
TXNL1-202ENST00000585497 EIF4G3O43432 1585 aaKnown RBP15.82■□□□□ 0.12
TXNL1-202ENST00000585497 RAPGEF2Q9Y4G8 1499 aa15.8■□□□□ 0.12
TXNL1-202ENST00000585497 TNIKQ9UKE5 1360 aa15.78■□□□□ 0.12
TXNL1-202ENST00000585497 UBTFP17480 764 aaKnown RBP15.76■□□□□ 0.11
TXNL1-202ENST00000585497 EHMT2Q96KQ7 1210 aa15.75■□□□□ 0.11
TXNL1-202ENST00000585497 FHAD1B1AJZ9 1412 aa15.74■□□□□ 0.11
TXNL1-202ENST00000585497 ADAMTS12P58397 1594 aa15.73■□□□□ 0.11
TXNL1-202ENST00000585497 MAGI1Q96QZ7 1491 aaPredicted RBP15.73■□□□□ 0.11
TXNL1-202ENST00000585497 SNAPC4Q5SXM2 1469 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms