RNA–Protein interactions for RNA: ENST00000585142.5

EPB41L3-235, Transcript of erythrocyte membrane protein band 4.1 like 3, humanhuman

TSL 4

Gene EPB41L3, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L3-235ENST00000585142 NISCHQ9Y2I1 1504 aa63.36■■■■■ 7.73
EPB41L3-235ENST00000585142 CCDC180Q9P1Z9 1646 aa56.09■■■■■ 6.57
EPB41L3-235ENST00000585142 ABCC9O60706 1549 aa54.42■■■■■ 6.3
EPB41L3-235ENST00000585142 ZCCHC6Q5VYS8 1495 aaKnown RBP52.87■■■■■ 6.05
EPB41L3-235ENST00000585142 DCAF8L2P0C7V8 631 aa52.82■■■■■ 6.05
EPB41L3-235ENST00000585142 NACADO15069 1562 aa52.67■■■■■ 6.02
EPB41L3-235ENST00000585142 RB1CC1Q8TDY2 1594 aa52.59■■■■■ 6.01
EPB41L3-235ENST00000585142 MYO15BQ96JP2 1530 aa52.52■■■■■ 6
EPB41L3-235ENST00000585142 DCAF1Q9Y4B6 1507 aa52.46■■■■■ 5.99
EPB41L3-235ENST00000585142 UNC13AQ9UPW8 1703 aa51.29■■■■■ 5.8
EPB41L3-235ENST00000585142 SCRIBQ14160 1630 aa51.2■■■■■ 5.79
EPB41L3-235ENST00000585142 PABPN1Q86U42 306 aaKnown RBP eCLIP50.96■■■■■ 5.75
EPB41L3-235ENST00000585142 BICRAQ9NZM4 1560 aa50.91■■■■■ 5.74
EPB41L3-235ENST00000585142 SHROOM4Q9ULL8 1493 aa50.52■■■■■ 5.68
EPB41L3-235ENST00000585142 EIF4G1Q04637 1599 aaKnown RBP49.57■■■■■ 5.53
EPB41L3-235ENST00000585142 DNAJC5BQ9UF47 199 aa49.46■■■■■ 5.51
EPB41L3-235ENST00000585142 CECR2Q9BXF3 1484 aa49.27■■■■■ 5.48
EPB41L3-235ENST00000585142 CC2D2AQ9P2K1 1620 aa49.23■■■■■ 5.47
EPB41L3-235ENST00000585142 BAZ1AQ9NRL2 1556 aaPredicted RBP49.09■■■■■ 5.45
EPB41L3-235ENST00000585142 SMARCA4P51532 1647 aa49.03■■■■■ 5.44
EPB41L3-235ENST00000585142 MROH2BQ7Z745 1585 aa48.81■■■■■ 5.4
EPB41L3-235ENST00000585142 ATAD2BQ9ULI0 1458 aa48.67■■■■■ 5.38
EPB41L3-235ENST00000585142 SMARCA2P51531 1590 aa48.66■■■■■ 5.38
EPB41L3-235ENST00000585142 NCAPD3P42695 1498 aa48.59■■■■■ 5.37
EPB41L3-235ENST00000585142 PEG3Q9GZU2 1588 aa48.56■■■■■ 5.36
EPB41L3-235ENST00000585142 RSF1Q96T23 1441 aaPredicted RBP48.46■■■■■ 5.35
EPB41L3-235ENST00000585142 HMGXB3Q12766 1538 aa48.37■■■■■ 5.33
EPB41L3-235ENST00000585142 BAZ1BQ9UIG0 1483 aaKnown RBP48.32■■■■■ 5.33
EPB41L3-235ENST00000585142 WIZO95785 1651 aa48.3■■■■■ 5.32
EPB41L3-235ENST00000585142 TOP2AP11388 1531 aaKnown RBP47.85■■■■■ 5.25
EPB41L3-235ENST00000585142 SUPT5HO00267 1087 aaKnown RBP47.66■■■■■ 5.22
EPB41L3-235ENST00000585142 CCDC88BA6NC98 1476 aa47.29■■■■■ 5.16
EPB41L3-235ENST00000585142 LAMC3Q9Y6N6 1575 aa47.23■■■■■ 5.15
EPB41L3-235ENST00000585142 CADPSQ9ULU8 1353 aa47.22■■■■■ 5.15
EPB41L3-235ENST00000585142 NESP48681 1621 aa47.2■■■■■ 5.15
EPB41L3-235ENST00000585142 CFTRP13569 1480 aa47.02■■■■■ 5.12
EPB41L3-235ENST00000585142 PDS5BQ9NTI5 1447 aa46.93■■■■■ 5.1
EPB41L3-235ENST00000585142 ERCC6Q03468 1493 aa46.92■■■■■ 5.1
EPB41L3-235ENST00000585142 FANCD2Q9BXW9 1451 aa46.65■■■■■ 5.06
EPB41L3-235ENST00000585142 KIF21AQ7Z4S6 1674 aa46.65■■■■■ 5.06
EPB41L3-235ENST00000585142 PRDM2Q13029 1718 aa46.64■■■■■ 5.06
EPB41L3-235ENST00000585142 CEP164Q9UPV0 1460 aa46.56■■■■■ 5.04
EPB41L3-235ENST00000585142 MRC2Q9UBG0 1479 aa46.38■■■■■ 5.01
EPB41L3-235ENST00000585142 THOC2Q8NI27 1593 aaKnown RBP46.37■■■■■ 5.01
EPB41L3-235ENST00000585142 CUX2O14529 1486 aa46.23■■■■■ 4.99
EPB41L3-235ENST00000585142 WDR62O43379 1518 aa46.18■■■■■ 4.98
EPB41L3-235ENST00000585142 URB2Q14146 1524 aaKnown RBP46.11■■■■■ 4.97
EPB41L3-235ENST00000585142 ABCC8Q09428 1581 aa46.05■■■■■ 4.96
EPB41L3-235ENST00000585142 TOPBP1Q92547 1522 aa45.95■■■■■ 4.95
EPB41L3-235ENST00000585142 DNMBPQ6XZF7 1577 aa45.94■■■■■ 4.94
EPB41L3-235ENST00000585142 CUX1P39880 1505 aa45.76■■■■■ 4.92
EPB41L3-235ENST00000585142 WRNQ14191 1432 aaPredicted RBP eCLIP45.71■■■■■ 4.91
EPB41L3-235ENST00000585142 POLA1P09884 1462 aaPredicted RBP45.58■■■■■ 4.89
EPB41L3-235ENST00000585142 IFT140Q96RY7 1462 aa45.57■■■■■ 4.89
EPB41L3-235ENST00000585142 FGD5Q6ZNL6 1462 aa45.55■■■■■ 4.88
EPB41L3-235ENST00000585142 TOP2BQ02880 1626 aa45.52■■■■■ 4.88
EPB41L3-235ENST00000585142 BIVM-ERCC5R4GMW8 1640 aa45.5■■■■■ 4.87
EPB41L3-235ENST00000585142 SYNJ1O43426 1573 aa45.5■■■■■ 4.87
EPB41L3-235ENST00000585142 SOGA1O94964 1423 aa45.46■■■■■ 4.87
EPB41L3-235ENST00000585142 RAD54L2Q9Y4B4 1467 aa45.37■■■■■ 4.85
EPB41L3-235ENST00000585142 TARBP1Q13395 1621 aaKnown RBP45.37■■■■■ 4.85
EPB41L3-235ENST00000585142 ZNF608Q9ULD9 1512 aaPredicted RBP45.26■■■■■ 4.84
EPB41L3-235ENST00000585142 ABCA10Q8WWZ4 1543 aa45.15■■■■■ 4.82
EPB41L3-235ENST00000585142 WDR97A6NE52 1622 aa45.12■■■■■ 4.81
EPB41L3-235ENST00000585142 TDRD9Q8NDG6 1382 aaKnown RBP45.11■■■■■ 4.81
EPB41L3-235ENST00000585142 EIF4G3O43432 1585 aaKnown RBP45.1■■■■■ 4.81
EPB41L3-235ENST00000585142 AQRO60306 1485 aaKnown RBP eCLIP45.1■■■■■ 4.81
EPB41L3-235ENST00000585142 TRIM41Q8WV44 630 aa45.03■■■■■ 4.8
EPB41L3-235ENST00000585142 GAPVD1Q14C86 1478 aa44.92■■■■■ 4.78
EPB41L3-235ENST00000585142 ABCA5Q8WWZ7 1642 aa44.88■■■■■ 4.78
EPB41L3-235ENST00000585142 GRIN2BQ13224 1484 aa44.86■■■■■ 4.77
EPB41L3-235ENST00000585142 CHIC1Q5VXU3 224 aa44.76■■■■■ 4.76
EPB41L3-235ENST00000585142 KIF27Q86VH2 1401 aa44.75■■■■■ 4.75
EPB41L3-235ENST00000585142 PBRM1Q86U86 1689 aa44.74■■■■■ 4.75
EPB41L3-235ENST00000585142 SNAPC4Q5SXM2 1469 aa44.7■■■■■ 4.75
EPB41L3-235ENST00000585142 MAGI1Q96QZ7 1491 aaPredicted RBP44.69■■■■■ 4.74
EPB41L3-235ENST00000585142 ERICH3Q5RHP9 1530 aa44.63■■■■■ 4.73
EPB41L3-235ENST00000585142 FBLN2P98095 1184 aa44.53■■■■■ 4.72
EPB41L3-235ENST00000585142 CHMP7Q8WUX9 453 aaPredicted RBP44.51■■■■■ 4.72
EPB41L3-235ENST00000585142 SYNJ2O15056 1496 aa44.5■■■■■ 4.71
EPB41L3-235ENST00000585142 OSCARQ8IYS5 282 aa44.47■■■■■ 4.71
EPB41L3-235ENST00000585142 IGF1RP08069 1367 aa44.46■■■■■ 4.71
EPB41L3-235ENST00000585142 FHAD1B1AJZ9 1412 aa44.44■■■■■ 4.7
EPB41L3-235ENST00000585142 ADAMTS12P58397 1594 aa44.42■■■■■ 4.7
EPB41L3-235ENST00000585142 CHD1O14646 1710 aa44.41■■■■■ 4.7
EPB41L3-235ENST00000585142 RUSC2Q8N2Y8 1516 aa44.4■■■■■ 4.7
EPB41L3-235ENST00000585142 CUL7Q14999 1698 aa44.31■■■■■ 4.68
EPB41L3-235ENST00000585142 GRIN2AQ12879 1464 aa44.26■■■■■ 4.68
EPB41L3-235ENST00000585142 EEA1Q15075 1411 aa44.24■■■■■ 4.67
EPB41L3-235ENST00000585142 CARMIL1Q5VZK9 1371 aa44.24■■■■■ 4.67
EPB41L3-235ENST00000585142 DNAJC5Q9H3Z4 198 aa44.24■■■■■ 4.67
EPB41L3-235ENST00000585142 CSRNP3Q8WYN3 585 aa44.11■■■■■ 4.65
EPB41L3-235ENST00000585142 FAM9AQ8IZU1 332 aaPredicted RBP44.04■■■■■ 4.64
EPB41L3-235ENST00000585142 NUP160Q12769 1436 aa44.04■■■■■ 4.64
EPB41L3-235ENST00000585142 RAPGEF2Q9Y4G8 1499 aa44.02■■■■■ 4.64
EPB41L3-235ENST00000585142 CEP170Q5SW79 1584 aa43.97■■■■■ 4.63
EPB41L3-235ENST00000585142 CLASP1Q7Z460 1538 aa43.97■■■■■ 4.63
EPB41L3-235ENST00000585142 PRXQ9BXM0 1461 aa43.96■■■■■ 4.63
EPB41L3-235ENST00000585142 KIAA0586Q9BVV6 1533 aa43.78■■■■■ 4.6
EPB41L3-235ENST00000585142 KIF21BO75037 1637 aa43.66■■■■■ 4.58
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms