RNA–Protein interactions for RNA: ENST00000584960.1

RIOK3-210, Transcript of RIO kinase 3, humanhuman

TSL 2

Gene RIOK3, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-210ENST00000584960 NISCHQ9Y2I1 1504 aa35.31■■■■□ 3.24
RIOK3-210ENST00000584960 CCDC180Q9P1Z9 1646 aa31.31■■■□□ 2.6
RIOK3-210ENST00000584960 ABCC9O60706 1549 aa30.23■■■□□ 2.43
RIOK3-210ENST00000584960 ZCCHC6Q5VYS8 1495 aaKnown RBP29.45■■■□□ 2.31
RIOK3-210ENST00000584960 NACADO15069 1562 aa29.37■■■□□ 2.29
RIOK3-210ENST00000584960 DCAF8L2P0C7V8 631 aa29.35■■■□□ 2.29
RIOK3-210ENST00000584960 MYO15BQ96JP2 1530 aa29.33■■■□□ 2.29
RIOK3-210ENST00000584960 RB1CC1Q8TDY2 1594 aa29.31■■■□□ 2.28
RIOK3-210ENST00000584960 DCAF1Q9Y4B6 1507 aa29.3■■■□□ 2.28
RIOK3-210ENST00000584960 UNC13AQ9UPW8 1703 aa28.61■■■□□ 2.17
RIOK3-210ENST00000584960 SCRIBQ14160 1630 aa28.47■■■□□ 2.15
RIOK3-210ENST00000584960 BICRAQ9NZM4 1560 aa28.34■■■□□ 2.13
RIOK3-210ENST00000584960 PABPN1Q86U42 306 aaKnown RBP eCLIP28.3■■■□□ 2.12
RIOK3-210ENST00000584960 SHROOM4Q9ULL8 1493 aa28.2■■■□□ 2.1
RIOK3-210ENST00000584960 EIF4G1Q04637 1599 aaKnown RBP27.59■■■□□ 2.01
RIOK3-210ENST00000584960 DNAJC5BQ9UF47 199 aa27.47■■□□□ 1.99
RIOK3-210ENST00000584960 CECR2Q9BXF3 1484 aa27.41■■□□□ 1.98
RIOK3-210ENST00000584960 CC2D2AQ9P2K1 1620 aa27.41■■□□□ 1.98
RIOK3-210ENST00000584960 BAZ1AQ9NRL2 1556 aaPredicted RBP27.37■■□□□ 1.97
RIOK3-210ENST00000584960 SMARCA4P51532 1647 aa27.32■■□□□ 1.96
RIOK3-210ENST00000584960 MROH2BQ7Z745 1585 aa27.16■■□□□ 1.94
RIOK3-210ENST00000584960 SMARCA2P51531 1590 aa27.13■■□□□ 1.93
RIOK3-210ENST00000584960 ATAD2BQ9ULI0 1458 aa27.1■■□□□ 1.93
RIOK3-210ENST00000584960 PEG3Q9GZU2 1588 aa27.09■■□□□ 1.93
RIOK3-210ENST00000584960 NCAPD3P42695 1498 aa27.08■■□□□ 1.93
RIOK3-210ENST00000584960 RSF1Q96T23 1441 aaPredicted RBP26.99■■□□□ 1.91
RIOK3-210ENST00000584960 HMGXB3Q12766 1538 aa26.96■■□□□ 1.91
RIOK3-210ENST00000584960 BAZ1BQ9UIG0 1483 aaKnown RBP26.9■■□□□ 1.9
RIOK3-210ENST00000584960 WIZO95785 1651 aa26.89■■□□□ 1.9
RIOK3-210ENST00000584960 TOP2AP11388 1531 aaKnown RBP26.66■■□□□ 1.86
RIOK3-210ENST00000584960 SUPT5HO00267 1087 aaKnown RBP26.51■■□□□ 1.83
RIOK3-210ENST00000584960 CCDC88BA6NC98 1476 aa26.34■■□□□ 1.81
RIOK3-210ENST00000584960 LAMC3Q9Y6N6 1575 aa26.33■■□□□ 1.8
RIOK3-210ENST00000584960 CADPSQ9ULU8 1353 aa26.3■■□□□ 1.8
RIOK3-210ENST00000584960 NESP48681 1621 aa26.23■■□□□ 1.79
RIOK3-210ENST00000584960 CFTRP13569 1480 aa26.19■■□□□ 1.78
RIOK3-210ENST00000584960 PDS5BQ9NTI5 1447 aa26.15■■□□□ 1.78
RIOK3-210ENST00000584960 ERCC6Q03468 1493 aa26.08■■□□□ 1.77
RIOK3-210ENST00000584960 PRDM2Q13029 1718 aa26.06■■□□□ 1.76
RIOK3-210ENST00000584960 KIF21AQ7Z4S6 1674 aa25.97■■□□□ 1.75
RIOK3-210ENST00000584960 FANCD2Q9BXW9 1451 aa25.97■■□□□ 1.75
RIOK3-210ENST00000584960 CEP164Q9UPV0 1460 aa25.91■■□□□ 1.74
RIOK3-210ENST00000584960 MRC2Q9UBG0 1479 aa25.81■■□□□ 1.72
RIOK3-210ENST00000584960 THOC2Q8NI27 1593 aaKnown RBP25.81■■□□□ 1.72
RIOK3-210ENST00000584960 CUX2O14529 1486 aa25.74■■□□□ 1.71
RIOK3-210ENST00000584960 WDR62O43379 1518 aa25.71■■□□□ 1.71
RIOK3-210ENST00000584960 ABCC8Q09428 1581 aa25.7■■□□□ 1.71
RIOK3-210ENST00000584960 URB2Q14146 1524 aaKnown RBP25.65■■□□□ 1.7
RIOK3-210ENST00000584960 DNMBPQ6XZF7 1577 aa25.6■■□□□ 1.69
RIOK3-210ENST00000584960 TOPBP1Q92547 1522 aa25.58■■□□□ 1.69
RIOK3-210ENST00000584960 CUX1P39880 1505 aa25.47■■□□□ 1.67
RIOK3-210ENST00000584960 WRNQ14191 1432 aaPredicted RBP eCLIP25.46■■□□□ 1.67
RIOK3-210ENST00000584960 TOP2BQ02880 1626 aa25.38■■□□□ 1.65
RIOK3-210ENST00000584960 IFT140Q96RY7 1462 aa25.38■■□□□ 1.65
RIOK3-210ENST00000584960 BIVM-ERCC5R4GMW8 1640 aa25.37■■□□□ 1.65
RIOK3-210ENST00000584960 POLA1P09884 1462 aaPredicted RBP25.37■■□□□ 1.65
RIOK3-210ENST00000584960 FGD5Q6ZNL6 1462 aa25.35■■□□□ 1.65
RIOK3-210ENST00000584960 SYNJ1O43426 1573 aa25.32■■□□□ 1.64
RIOK3-210ENST00000584960 SOGA1O94964 1423 aa25.32■■□□□ 1.64
RIOK3-210ENST00000584960 TARBP1Q13395 1621 aaKnown RBP25.28■■□□□ 1.64
RIOK3-210ENST00000584960 RAD54L2Q9Y4B4 1467 aa25.22■■□□□ 1.63
RIOK3-210ENST00000584960 WDR97A6NE52 1622 aa25.19■■□□□ 1.62
RIOK3-210ENST00000584960 ABCA10Q8WWZ4 1543 aa25.17■■□□□ 1.62
RIOK3-210ENST00000584960 ZNF608Q9ULD9 1512 aaPredicted RBP25.15■■□□□ 1.62
RIOK3-210ENST00000584960 TRIM41Q8WV44 630 aa25.1■■□□□ 1.61
RIOK3-210ENST00000584960 EIF4G3O43432 1585 aaKnown RBP25.1■■□□□ 1.61
RIOK3-210ENST00000584960 AQRO60306 1485 aaKnown RBP eCLIP25.09■■□□□ 1.61
RIOK3-210ENST00000584960 TDRD9Q8NDG6 1382 aaKnown RBP25.08■■□□□ 1.61
RIOK3-210ENST00000584960 GAPVD1Q14C86 1478 aa25.02■■□□□ 1.6
RIOK3-210ENST00000584960 ABCA5Q8WWZ7 1642 aa25.01■■□□□ 1.59
RIOK3-210ENST00000584960 GRIN2BQ13224 1484 aa24.98■■□□□ 1.59
RIOK3-210ENST00000584960 CHIC1Q5VXU3 224 aa24.95■■□□□ 1.58
RIOK3-210ENST00000584960 KIF27Q86VH2 1401 aa24.94■■□□□ 1.58
RIOK3-210ENST00000584960 PBRM1Q86U86 1689 aa24.93■■□□□ 1.58
RIOK3-210ENST00000584960 MAGI1Q96QZ7 1491 aaPredicted RBP24.9■■□□□ 1.58
RIOK3-210ENST00000584960 ERICH3Q5RHP9 1530 aa24.88■■□□□ 1.57
RIOK3-210ENST00000584960 SNAPC4Q5SXM2 1469 aa24.84■■□□□ 1.57
RIOK3-210ENST00000584960 SYNJ2O15056 1496 aa24.78■■□□□ 1.56
RIOK3-210ENST00000584960 IGF1RP08069 1367 aa24.78■■□□□ 1.56
RIOK3-210ENST00000584960 CHMP7Q8WUX9 453 aaPredicted RBP24.77■■□□□ 1.56
RIOK3-210ENST00000584960 OSCARQ8IYS5 282 aa24.76■■□□□ 1.55
RIOK3-210ENST00000584960 FHAD1B1AJZ9 1412 aa24.76■■□□□ 1.55
RIOK3-210ENST00000584960 FBLN2P98095 1184 aa24.74■■□□□ 1.55
RIOK3-210ENST00000584960 CHD1O14646 1710 aa24.74■■□□□ 1.55
RIOK3-210ENST00000584960 ADAMTS12P58397 1594 aa24.73■■□□□ 1.55
RIOK3-210ENST00000584960 CUL7Q14999 1698 aa24.72■■□□□ 1.55
RIOK3-210ENST00000584960 EEA1Q15075 1411 aa24.7■■□□□ 1.55
RIOK3-210ENST00000584960 RUSC2Q8N2Y8 1516 aa24.7■■□□□ 1.54
RIOK3-210ENST00000584960 CARMIL1Q5VZK9 1371 aa24.65■■□□□ 1.54
RIOK3-210ENST00000584960 GRIN2AQ12879 1464 aa24.64■■□□□ 1.53
RIOK3-210ENST00000584960 CSRNP3Q8WYN3 585 aa24.6■■□□□ 1.53
RIOK3-210ENST00000584960 DNAJC5Q9H3Z4 198 aa24.6■■□□□ 1.53
RIOK3-210ENST00000584960 RAPGEF2Q9Y4G8 1499 aa24.53■■□□□ 1.52
RIOK3-210ENST00000584960 NUP160Q12769 1436 aa24.52■■□□□ 1.52
RIOK3-210ENST00000584960 PRXQ9BXM0 1461 aa24.51■■□□□ 1.51
RIOK3-210ENST00000584960 CLASP1Q7Z460 1538 aa24.48■■□□□ 1.51
RIOK3-210ENST00000584960 CEP170Q5SW79 1584 aa24.47■■□□□ 1.51
RIOK3-210ENST00000584960 FAM9AQ8IZU1 332 aaPredicted RBP24.47■■□□□ 1.51
RIOK3-210ENST00000584960 KIAA0586Q9BVV6 1533 aa24.4■■□□□ 1.5
RIOK3-210ENST00000584960 KIF21BO75037 1637 aa24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 113.7 ms