RNA–Protein interactions for RNA: ENST00000584856.1

PGAP3-210, Transcript of post-GPI attachment to proteins 3, humanhuman

TSL 4

Gene PGAP3, Length 538 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP3-210ENST00000584856 NISCHQ9Y2I1 1504 aa26.69■■□□□ 1.86
PGAP3-210ENST00000584856 CCDC180Q9P1Z9 1646 aa23.6■■□□□ 1.37
PGAP3-210ENST00000584856 ABCC9O60706 1549 aa22.86■■□□□ 1.25
PGAP3-210ENST00000584856 ZCCHC6Q5VYS8 1495 aaKnown RBP22.28■■□□□ 1.16
PGAP3-210ENST00000584856 MYO15BQ96JP2 1530 aa22.21■■□□□ 1.15
PGAP3-210ENST00000584856 NACADO15069 1562 aa22.19■■□□□ 1.14
PGAP3-210ENST00000584856 DCAF1Q9Y4B6 1507 aa22.16■■□□□ 1.14
PGAP3-210ENST00000584856 DCAF8L2P0C7V8 631 aa22.15■■□□□ 1.14
PGAP3-210ENST00000584856 RB1CC1Q8TDY2 1594 aa22.12■■□□□ 1.13
PGAP3-210ENST00000584856 UNC13AQ9UPW8 1703 aa21.51■■□□□ 1.03
PGAP3-210ENST00000584856 SCRIBQ14160 1630 aa21.48■■□□□ 1.03
PGAP3-210ENST00000584856 BICRAQ9NZM4 1560 aa21.44■■□□□ 1.02
PGAP3-210ENST00000584856 PABPN1Q86U42 306 aaKnown RBP eCLIP21.42■■□□□ 1.02
PGAP3-210ENST00000584856 SHROOM4Q9ULL8 1493 aa21.34■■□□□ 1.01
PGAP3-210ENST00000584856 DNAJC5BQ9UF47 199 aa20.97■□□□□ 0.95
PGAP3-210ENST00000584856 EIF4G1Q04637 1599 aaKnown RBP20.85■□□□□ 0.93
PGAP3-210ENST00000584856 CECR2Q9BXF3 1484 aa20.74■□□□□ 0.91
PGAP3-210ENST00000584856 CC2D2AQ9P2K1 1620 aa20.69■□□□□ 0.9
PGAP3-210ENST00000584856 BAZ1AQ9NRL2 1556 aaPredicted RBP20.68■□□□□ 0.9
PGAP3-210ENST00000584856 SMARCA4P51532 1647 aa20.63■□□□□ 0.89
PGAP3-210ENST00000584856 MROH2BQ7Z745 1585 aa20.54■□□□□ 0.88
PGAP3-210ENST00000584856 NCAPD3P42695 1498 aa20.51■□□□□ 0.87
PGAP3-210ENST00000584856 ATAD2BQ9ULI0 1458 aa20.51■□□□□ 0.87
PGAP3-210ENST00000584856 SMARCA2P51531 1590 aa20.5■□□□□ 0.87
PGAP3-210ENST00000584856 PEG3Q9GZU2 1588 aa20.49■□□□□ 0.87
PGAP3-210ENST00000584856 RSF1Q96T23 1441 aaPredicted RBP20.44■□□□□ 0.86
PGAP3-210ENST00000584856 HMGXB3Q12766 1538 aa20.38■□□□□ 0.85
PGAP3-210ENST00000584856 BAZ1BQ9UIG0 1483 aaKnown RBP20.33■□□□□ 0.85
PGAP3-210ENST00000584856 WIZO95785 1651 aa20.27■□□□□ 0.84
PGAP3-210ENST00000584856 TOP2AP11388 1531 aaKnown RBP20.13■□□□□ 0.81
PGAP3-210ENST00000584856 SUPT5HO00267 1087 aaKnown RBP20■□□□□ 0.79
PGAP3-210ENST00000584856 CADPSQ9ULU8 1353 aa19.91■□□□□ 0.78
PGAP3-210ENST00000584856 CCDC88BA6NC98 1476 aa19.91■□□□□ 0.78
PGAP3-210ENST00000584856 LAMC3Q9Y6N6 1575 aa19.87■□□□□ 0.77
PGAP3-210ENST00000584856 NESP48681 1621 aa19.84■□□□□ 0.77
PGAP3-210ENST00000584856 CFTRP13569 1480 aa19.83■□□□□ 0.76
PGAP3-210ENST00000584856 PDS5BQ9NTI5 1447 aa19.77■□□□□ 0.76
PGAP3-210ENST00000584856 ERCC6Q03468 1493 aa19.7■□□□□ 0.74
PGAP3-210ENST00000584856 FANCD2Q9BXW9 1451 aa19.63■□□□□ 0.73
PGAP3-210ENST00000584856 CEP164Q9UPV0 1460 aa19.59■□□□□ 0.73
PGAP3-210ENST00000584856 PRDM2Q13029 1718 aa19.56■□□□□ 0.72
PGAP3-210ENST00000584856 KIF21AQ7Z4S6 1674 aa19.56■□□□□ 0.72
PGAP3-210ENST00000584856 MRC2Q9UBG0 1479 aa19.53■□□□□ 0.72
PGAP3-210ENST00000584856 THOC2Q8NI27 1593 aaKnown RBP19.49■□□□□ 0.71
PGAP3-210ENST00000584856 CUX2O14529 1486 aa19.48■□□□□ 0.71
PGAP3-210ENST00000584856 WDR62O43379 1518 aa19.45■□□□□ 0.7
PGAP3-210ENST00000584856 ABCC8Q09428 1581 aa19.42■□□□□ 0.7
PGAP3-210ENST00000584856 URB2Q14146 1524 aaKnown RBP19.41■□□□□ 0.7
PGAP3-210ENST00000584856 TOPBP1Q92547 1522 aa19.34■□□□□ 0.69
PGAP3-210ENST00000584856 DNMBPQ6XZF7 1577 aa19.32■□□□□ 0.68
PGAP3-210ENST00000584856 CUX1P39880 1505 aa19.26■□□□□ 0.67
PGAP3-210ENST00000584856 DNAJC5Q9H3Z4 198 aa19.25■□□□□ 0.67
PGAP3-210ENST00000584856 WRNQ14191 1432 aaPredicted RBP eCLIP19.25■□□□□ 0.67
PGAP3-210ENST00000584856 POLA1P09884 1462 aaPredicted RBP19.19■□□□□ 0.66
PGAP3-210ENST00000584856 IFT140Q96RY7 1462 aa19.19■□□□□ 0.66
PGAP3-210ENST00000584856 FGD5Q6ZNL6 1462 aa19.16■□□□□ 0.66
PGAP3-210ENST00000584856 TOP2BQ02880 1626 aa19.15■□□□□ 0.66
PGAP3-210ENST00000584856 SOGA1O94964 1423 aa19.13■□□□□ 0.65
PGAP3-210ENST00000584856 BIVM-ERCC5R4GMW8 1640 aa19.13■□□□□ 0.65
PGAP3-210ENST00000584856 SYNJ1O43426 1573 aa19.12■□□□□ 0.65
PGAP3-210ENST00000584856 TARBP1Q13395 1621 aaKnown RBP19.1■□□□□ 0.65
PGAP3-210ENST00000584856 RAD54L2Q9Y4B4 1467 aa19.08■□□□□ 0.64
PGAP3-210ENST00000584856 ZNF608Q9ULD9 1512 aaPredicted RBP19.04■□□□□ 0.64
PGAP3-210ENST00000584856 ABCA10Q8WWZ4 1543 aa19.03■□□□□ 0.64
PGAP3-210ENST00000584856 WDR97A6NE52 1622 aa19.01■□□□□ 0.63
PGAP3-210ENST00000584856 TDRD9Q8NDG6 1382 aaKnown RBP18.98■□□□□ 0.63
PGAP3-210ENST00000584856 AQRO60306 1485 aaKnown RBP eCLIP18.97■□□□□ 0.63
PGAP3-210ENST00000584856 EIF4G3O43432 1585 aaKnown RBP18.94■□□□□ 0.62
PGAP3-210ENST00000584856 TRIM41Q8WV44 630 aa18.94■□□□□ 0.62
PGAP3-210ENST00000584856 GAPVD1Q14C86 1478 aa18.91■□□□□ 0.62
PGAP3-210ENST00000584856 GRIN2BQ13224 1484 aa18.89■□□□□ 0.61
PGAP3-210ENST00000584856 ABCA5Q8WWZ7 1642 aa18.88■□□□□ 0.61
PGAP3-210ENST00000584856 KIF27Q86VH2 1401 aa18.85■□□□□ 0.61
PGAP3-210ENST00000584856 CHIC1Q5VXU3 224 aa18.85■□□□□ 0.61
PGAP3-210ENST00000584856 MAGI1Q96QZ7 1491 aaPredicted RBP18.83■□□□□ 0.6
PGAP3-210ENST00000584856 ERICH3Q5RHP9 1530 aa18.8■□□□□ 0.6
PGAP3-210ENST00000584856 SNAPC4Q5SXM2 1469 aa18.78■□□□□ 0.6
PGAP3-210ENST00000584856 IGF1RP08069 1367 aa18.76■□□□□ 0.59
PGAP3-210ENST00000584856 PBRM1Q86U86 1689 aa18.75■□□□□ 0.59
PGAP3-210ENST00000584856 SYNJ2O15056 1496 aa18.74■□□□□ 0.59
PGAP3-210ENST00000584856 OSCARQ8IYS5 282 aa18.73■□□□□ 0.59
PGAP3-210ENST00000584856 FHAD1B1AJZ9 1412 aa18.73■□□□□ 0.59
PGAP3-210ENST00000584856 CHMP7Q8WUX9 453 aaPredicted RBP18.72■□□□□ 0.59
PGAP3-210ENST00000584856 FBLN2P98095 1184 aa18.68■□□□□ 0.58
PGAP3-210ENST00000584856 ADAMTS12P58397 1594 aa18.68■□□□□ 0.58
PGAP3-210ENST00000584856 EEA1Q15075 1411 aa18.66■□□□□ 0.58
PGAP3-210ENST00000584856 RUSC2Q8N2Y8 1516 aa18.66■□□□□ 0.58
PGAP3-210ENST00000584856 CARMIL1Q5VZK9 1371 aa18.64■□□□□ 0.57
PGAP3-210ENST00000584856 GRIN2AQ12879 1464 aa18.63■□□□□ 0.57
PGAP3-210ENST00000584856 CUL7Q14999 1698 aa18.63■□□□□ 0.57
PGAP3-210ENST00000584856 CHD1O14646 1710 aa18.61■□□□□ 0.57
PGAP3-210ENST00000584856 CSRNP3Q8WYN3 585 aa18.58■□□□□ 0.56
PGAP3-210ENST00000584856 NUP160Q12769 1436 aa18.57■□□□□ 0.56
PGAP3-210ENST00000584856 PRXQ9BXM0 1461 aa18.54■□□□□ 0.56
PGAP3-210ENST00000584856 RAPGEF2Q9Y4G8 1499 aa18.53■□□□□ 0.56
PGAP3-210ENST00000584856 CLASP1Q7Z460 1538 aa18.51■□□□□ 0.55
PGAP3-210ENST00000584856 CEP170Q5SW79 1584 aa18.48■□□□□ 0.55
PGAP3-210ENST00000584856 KIAA0586Q9BVV6 1533 aa18.45■□□□□ 0.54
PGAP3-210ENST00000584856 FAM9AQ8IZU1 332 aaPredicted RBP18.45■□□□□ 0.54
PGAP3-210ENST00000584856 JPH4Q96JJ6 628 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 125.4 ms