RNA–Protein interactions for RNA: ENST00000584235.5

ZNF407-208, Transcript of zinc finger protein 407, humanhuman

TSL 3

Gene ZNF407, Length 1,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF407-208ENST00000584235 AEBP2Q6ZN18 517 aaPredicted RBP31.31■■■□□ 2.6
ZNF407-208ENST00000584235 CHIC1Q5VXU3 224 aa30.64■■■□□ 2.5
ZNF407-208ENST00000584235 NISCHQ9Y2I1 1504 aa30.27■■■□□ 2.44
ZNF407-208ENST00000584235 PHF23Q9BUL5 403 aaPredicted RBP26.97■■□□□ 1.91
ZNF407-208ENST00000584235 CCDC180Q9P1Z9 1646 aa26.65■■□□□ 1.86
ZNF407-208ENST00000584235 SENP3Q9H4L4 574 aaPredicted RBP26.51■■□□□ 1.83
ZNF407-208ENST00000584235 ABCC9O60706 1549 aa26.07■■□□□ 1.76
ZNF407-208ENST00000584235 DCAF8L2P0C7V8 631 aa25.38■■□□□ 1.65
ZNF407-208ENST00000584235 ZCCHC6Q5VYS8 1495 aaKnown RBP25.23■■□□□ 1.63
ZNF407-208ENST00000584235 NACADO15069 1562 aa25.05■■□□□ 1.6
ZNF407-208ENST00000584235 DCAF1Q9Y4B6 1507 aa25.02■■□□□ 1.6
ZNF407-208ENST00000584235 MYO15BQ96JP2 1530 aa25■■□□□ 1.59
ZNF407-208ENST00000584235 RB1CC1Q8TDY2 1594 aa25■■□□□ 1.59
ZNF407-208ENST00000584235 PLPPR3Q6T4P5 718 aa24.9■■□□□ 1.58
ZNF407-208ENST00000584235 FOXD1Q16676 465 aa24.61■■□□□ 1.53
ZNF407-208ENST00000584235 DNAJC5BQ9UF47 199 aa24.45■■□□□ 1.5
ZNF407-208ENST00000584235 SCRIBQ14160 1630 aa24.4■■□□□ 1.5
ZNF407-208ENST00000584235 PABPN1Q86U42 306 aaKnown RBP eCLIP24.35■■□□□ 1.49
ZNF407-208ENST00000584235 UNC13AQ9UPW8 1703 aa24.31■■□□□ 1.48
ZNF407-208ENST00000584235 SHROOM4Q9ULL8 1493 aa24.22■■□□□ 1.47
ZNF407-208ENST00000584235 BICRAQ9NZM4 1560 aa24.19■■□□□ 1.46
ZNF407-208ENST00000584235 PPP6R1Q9UPN7 881 aa23.76■■□□□ 1.39
ZNF407-208ENST00000584235 ADRA2BP18089 450 aa23.73■■□□□ 1.39
ZNF407-208ENST00000584235 CECR2Q9BXF3 1484 aa23.56■■□□□ 1.36
ZNF407-208ENST00000584235 CC2D2AQ9P2K1 1620 aa23.56■■□□□ 1.36
ZNF407-208ENST00000584235 EIF4G1Q04637 1599 aaKnown RBP23.54■■□□□ 1.36
ZNF407-208ENST00000584235 BAZ1AQ9NRL2 1556 aaPredicted RBP23.42■■□□□ 1.34
ZNF407-208ENST00000584235 SMARCA4P51532 1647 aa23.36■■□□□ 1.33
ZNF407-208ENST00000584235 MROH2BQ7Z745 1585 aa23.33■■□□□ 1.33
ZNF407-208ENST00000584235 RSF1Q96T23 1441 aaPredicted RBP23.23■■□□□ 1.31
ZNF407-208ENST00000584235 PIAS4Q8N2W9 510 aaPredicted RBP23.22■■□□□ 1.31
ZNF407-208ENST00000584235 ATAD2BQ9ULI0 1458 aa23.21■■□□□ 1.31
ZNF407-208ENST00000584235 SMARCA2P51531 1590 aa23.18■■□□□ 1.3
ZNF407-208ENST00000584235 NCAPD3P42695 1498 aa23.16■■□□□ 1.3
ZNF407-208ENST00000584235 PEG3Q9GZU2 1588 aa23.1■■□□□ 1.29
ZNF407-208ENST00000584235 WIZO95785 1651 aa23.06■■□□□ 1.28
ZNF407-208ENST00000584235 SUPT5HO00267 1087 aaKnown RBP23.04■■□□□ 1.28
ZNF407-208ENST00000584235 BAZ1BQ9UIG0 1483 aaKnown RBP23.04■■□□□ 1.28
ZNF407-208ENST00000584235 HMGXB3Q12766 1538 aa22.99■■□□□ 1.27
ZNF407-208ENST00000584235 TOP2AP11388 1531 aaKnown RBP22.84■■□□□ 1.25
ZNF407-208ENST00000584235 CCDC88BA6NC98 1476 aa22.64■■□□□ 1.21
ZNF407-208ENST00000584235 MSH5O43196 834 aa22.63■■□□□ 1.21
ZNF407-208ENST00000584235 CUX2O14529 1486 aa22.56■■□□□ 1.2
ZNF407-208ENST00000584235 ERCC6Q03468 1493 aa22.54■■□□□ 1.2
ZNF407-208ENST00000584235 CADPSQ9ULU8 1353 aa22.54■■□□□ 1.2
ZNF407-208ENST00000584235 DNAJC5Q9H3Z4 198 aa22.52■■□□□ 1.2
ZNF407-208ENST00000584235 NESP48681 1621 aa22.48■■□□□ 1.19
ZNF407-208ENST00000584235 LAMC3Q9Y6N6 1575 aa22.43■■□□□ 1.18
ZNF407-208ENST00000584235 CFTRP13569 1480 aa22.42■■□□□ 1.18
ZNF407-208ENST00000584235 PDS5BQ9NTI5 1447 aa22.37■■□□□ 1.17
ZNF407-208ENST00000584235 FANCD2Q9BXW9 1451 aa22.24■■□□□ 1.15
ZNF407-208ENST00000584235 THOC2Q8NI27 1593 aaKnown RBP22.16■■□□□ 1.14
ZNF407-208ENST00000584235 CEP164Q9UPV0 1460 aa22.16■■□□□ 1.14
ZNF407-208ENST00000584235 PRDM2Q13029 1718 aa22.12■■□□□ 1.13
ZNF407-208ENST00000584235 KIF21AQ7Z4S6 1674 aa22.12■■□□□ 1.13
ZNF407-208ENST00000584235 MRC2Q9UBG0 1479 aa22.06■■□□□ 1.12
ZNF407-208ENST00000584235 URB2Q14146 1524 aaKnown RBP21.96■■□□□ 1.11
ZNF407-208ENST00000584235 ABCC8Q09428 1581 aa21.96■■□□□ 1.11
ZNF407-208ENST00000584235 PPP4R3CPQ6ZMV5 832 aa21.96■■□□□ 1.11
ZNF407-208ENST00000584235 WDR62O43379 1518 aa21.93■■□□□ 1.1
ZNF407-208ENST00000584235 TOPBP1Q92547 1522 aa21.9■■□□□ 1.1
ZNF407-208ENST00000584235 WRNQ14191 1432 aaPredicted RBP eCLIP21.89■■□□□ 1.1
ZNF407-208ENST00000584235 DNMBPQ6XZF7 1577 aa21.88■■□□□ 1.09
ZNF407-208ENST00000584235 CUX1P39880 1505 aa21.85■■□□□ 1.09
ZNF407-208ENST00000584235 TRIM41Q8WV44 630 aa21.75■■□□□ 1.07
ZNF407-208ENST00000584235 SOGA1O94964 1423 aa21.74■■□□□ 1.07
ZNF407-208ENST00000584235 POLA1P09884 1462 aaPredicted RBP21.74■■□□□ 1.07
ZNF407-208ENST00000584235 FGD5Q6ZNL6 1462 aa21.74■■□□□ 1.07
ZNF407-208ENST00000584235 SYNJ1O43426 1573 aa21.74■■□□□ 1.07
ZNF407-208ENST00000584235 TOP2BQ02880 1626 aa21.73■■□□□ 1.07
ZNF407-208ENST00000584235 IFT140Q96RY7 1462 aa21.71■■□□□ 1.07
ZNF407-208ENST00000584235 BIVM-ERCC5R4GMW8 1640 aa21.69■■□□□ 1.06
ZNF407-208ENST00000584235 RAD54L2Q9Y4B4 1467 aa21.68■■□□□ 1.06
ZNF407-208ENST00000584235 SCAF1Q9H7N4 1312 aaKnown RBP21.66■■□□□ 1.06
ZNF407-208ENST00000584235 KCNA4P22459 653 aa21.59■■□□□ 1.05
ZNF407-208ENST00000584235 TDRD9Q8NDG6 1382 aaKnown RBP21.59■■□□□ 1.05
ZNF407-208ENST00000584235 TARBP1Q13395 1621 aaKnown RBP21.58■■□□□ 1.05
ZNF407-208ENST00000584235 OSCARQ8IYS5 282 aa21.57■■□□□ 1.04
ZNF407-208ENST00000584235 ZNF608Q9ULD9 1512 aaPredicted RBP21.56■■□□□ 1.04
ZNF407-208ENST00000584235 ABCA10Q8WWZ4 1543 aa21.55■■□□□ 1.04
ZNF407-208ENST00000584235 AQRO60306 1485 aaKnown RBP eCLIP21.54■■□□□ 1.04
ZNF407-208ENST00000584235 MAPK8IP2Q13387 824 aaPredicted RBP21.5■■□□□ 1.03
ZNF407-208ENST00000584235 GAPVD1Q14C86 1478 aa21.45■■□□□ 1.03
ZNF407-208ENST00000584235 KIF27Q86VH2 1401 aa21.44■■□□□ 1.02
ZNF407-208ENST00000584235 WDR97A6NE52 1622 aa21.42■■□□□ 1.02
ZNF407-208ENST00000584235 EIF4G3O43432 1585 aaKnown RBP21.41■■□□□ 1.02
ZNF407-208ENST00000584235 GRIN2BQ13224 1484 aa21.39■■□□□ 1.02
ZNF407-208ENST00000584235 NCBP3Q53F19 620 aaKnown RBP21.38■■□□□ 1.01
ZNF407-208ENST00000584235 ABCA5Q8WWZ7 1642 aa21.36■■□□□ 1.01
ZNF407-208ENST00000584235 IGF1RP08069 1367 aa21.34■■□□□ 1.01
ZNF407-208ENST00000584235 FBLN2P98095 1184 aa21.32■■□□□ 1
ZNF407-208ENST00000584235 CNKSR2Q8WXI2 1034 aa21.32■■□□□ 1
ZNF407-208ENST00000584235 RUSC2Q8N2Y8 1516 aa21.32■■□□□ 1
ZNF407-208ENST00000584235 FAM9AQ8IZU1 332 aaPredicted RBP21.3■■□□□ 1
ZNF407-208ENST00000584235 SNAPC4Q5SXM2 1469 aa21.29■■□□□ 1
ZNF407-208ENST00000584235 CHMP7Q8WUX9 453 aaPredicted RBP21.29■■□□□ 1
ZNF407-208ENST00000584235 ERICH3Q5RHP9 1530 aa21.28■■□□□ 1
ZNF407-208ENST00000584235 MAGI1Q96QZ7 1491 aaPredicted RBP21.27■■□□□ 1
ZNF407-208ENST00000584235 CSRNP3Q8WYN3 585 aa21.27■■□□□ 1
ZNF407-208ENST00000584235 PBRM1Q86U86 1689 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms