RNA–Protein interactions for RNA: ENST00000583796.1

IFT20-213, Transcript of intraflagellar transport 20, humanhuman

Gene IFT20, Length 1,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-213ENST00000583796 AEBP2Q6ZN18 517 aaPredicted RBP23.35■■□□□ 1.33
IFT20-213ENST00000583796 NISCHQ9Y2I1 1504 aa23.03■■□□□ 1.28
IFT20-213ENST00000583796 CHIC1Q5VXU3 224 aa22.34■■□□□ 1.17
IFT20-213ENST00000583796 CCDC180Q9P1Z9 1646 aa20.14■□□□□ 0.82
IFT20-213ENST00000583796 SENP3Q9H4L4 574 aaPredicted RBP20.05■□□□□ 0.8
IFT20-213ENST00000583796 PHF23Q9BUL5 403 aaPredicted RBP19.73■□□□□ 0.75
IFT20-213ENST00000583796 ZCCHC6Q5VYS8 1495 aaKnown RBP19.39■□□□□ 0.69
IFT20-213ENST00000583796 DCAF1Q9Y4B6 1507 aa19.17■□□□□ 0.66
IFT20-213ENST00000583796 MYO15BQ96JP2 1530 aa18.94■□□□□ 0.62
IFT20-213ENST00000583796 ABCC9O60706 1549 aa18.73■□□□□ 0.59
IFT20-213ENST00000583796 DCAF8L2P0C7V8 631 aa18.72■□□□□ 0.59
IFT20-213ENST00000583796 NACADO15069 1562 aa18.71■□□□□ 0.59
IFT20-213ENST00000583796 SHROOM4Q9ULL8 1493 aa18.6■□□□□ 0.57
IFT20-213ENST00000583796 FOXD1Q16676 465 aa18.58■□□□□ 0.56
IFT20-213ENST00000583796 RB1CC1Q8TDY2 1594 aa18.5■□□□□ 0.55
IFT20-213ENST00000583796 SCRIBQ14160 1630 aa18.35■□□□□ 0.53
IFT20-213ENST00000583796 UNC13AQ9UPW8 1703 aa18.05■□□□□ 0.48
IFT20-213ENST00000583796 SUPT5HO00267 1087 aaKnown RBP17.96■□□□□ 0.47
IFT20-213ENST00000583796 PLPPR3Q6T4P5 718 aa17.94■□□□□ 0.46
IFT20-213ENST00000583796 BICRAQ9NZM4 1560 aa17.86■□□□□ 0.45
IFT20-213ENST00000583796 RSF1Q96T23 1441 aaPredicted RBP17.85■□□□□ 0.45
IFT20-213ENST00000583796 BAZ1AQ9NRL2 1556 aaPredicted RBP17.82■□□□□ 0.44
IFT20-213ENST00000583796 CECR2Q9BXF3 1484 aa17.77■□□□□ 0.43
IFT20-213ENST00000583796 MROH2BQ7Z745 1585 aa17.72■□□□□ 0.43
IFT20-213ENST00000583796 SMARCA4P51532 1647 aa17.68■□□□□ 0.42
IFT20-213ENST00000583796 PABPN1Q86U42 306 aaKnown RBP eCLIP17.59■□□□□ 0.41
IFT20-213ENST00000583796 WIZO95785 1651 aa17.57■□□□□ 0.4
IFT20-213ENST00000583796 PEG3Q9GZU2 1588 aa17.55■□□□□ 0.4
IFT20-213ENST00000583796 TOP2AP11388 1531 aaKnown RBP17.5■□□□□ 0.39
IFT20-213ENST00000583796 MSH5O43196 834 aa17.47■□□□□ 0.39
IFT20-213ENST00000583796 PIAS4Q8N2W9 510 aaPredicted RBP17.42■□□□□ 0.38
IFT20-213ENST00000583796 SMARCA2P51531 1590 aa17.42■□□□□ 0.38
IFT20-213ENST00000583796 PPP6R1Q9UPN7 881 aa17.38■□□□□ 0.37
IFT20-213ENST00000583796 ADRA2BP18089 450 aa17.35■□□□□ 0.37
IFT20-213ENST00000583796 ATAD2BQ9ULI0 1458 aa17.34■□□□□ 0.37
IFT20-213ENST00000583796 EIF4G1Q04637 1599 aaKnown RBP17.34■□□□□ 0.37
IFT20-213ENST00000583796 BAZ1BQ9UIG0 1483 aaKnown RBP17.26■□□□□ 0.35
IFT20-213ENST00000583796 HMGXB3Q12766 1538 aa17.26■□□□□ 0.35
IFT20-213ENST00000583796 CCDC88BA6NC98 1476 aa17.23■□□□□ 0.35
IFT20-213ENST00000583796 NCAPD3P42695 1498 aa17.22■□□□□ 0.35
IFT20-213ENST00000583796 CC2D2AQ9P2K1 1620 aa17.03■□□□□ 0.32
IFT20-213ENST00000583796 TRIM41Q8WV44 630 aa16.99■□□□□ 0.31
IFT20-213ENST00000583796 POTEDQ86YR6 584 aa16.87■□□□□ 0.29
IFT20-213ENST00000583796 CFTRP13569 1480 aa16.86■□□□□ 0.29
IFT20-213ENST00000583796 ABCC8Q09428 1581 aa16.85■□□□□ 0.29
IFT20-213ENST00000583796 PRDM2Q13029 1718 aa16.84■□□□□ 0.29
IFT20-213ENST00000583796 WRNQ14191 1432 aaPredicted RBP eCLIP16.82■□□□□ 0.28
IFT20-213ENST00000583796 EEA1Q15075 1411 aa16.74■□□□□ 0.27
IFT20-213ENST00000583796 CADPSQ9ULU8 1353 aa16.74■□□□□ 0.27
IFT20-213ENST00000583796 TOP2BQ02880 1626 aa16.72■□□□□ 0.27
IFT20-213ENST00000583796 BIVM-ERCC5R4GMW8 1640 aa16.72■□□□□ 0.27
IFT20-213ENST00000583796 SYNJ1O43426 1573 aa16.72■□□□□ 0.27
IFT20-213ENST00000583796 LAMC3Q9Y6N6 1575 aa16.65■□□□□ 0.26
IFT20-213ENST00000583796 CUX1P39880 1505 aa16.58■□□□□ 0.24
IFT20-213ENST00000583796 FANCD2Q9BXW9 1451 aa16.55■□□□□ 0.24
IFT20-213ENST00000583796 LOC105371045A0A1W2PR82 267 aa16.54■□□□□ 0.24
IFT20-213ENST00000583796 SOGA1O94964 1423 aa16.54■□□□□ 0.24
IFT20-213ENST00000583796 FAM9AQ8IZU1 332 aaPredicted RBP16.53■□□□□ 0.24
IFT20-213ENST00000583796 PDS5BQ9NTI5 1447 aa16.49■□□□□ 0.23
IFT20-213ENST00000583796 KIF21BO75037 1637 aa16.48■□□□□ 0.23
IFT20-213ENST00000583796 DNMBPQ6XZF7 1577 aa16.48■□□□□ 0.23
IFT20-213ENST00000583796 CSRNP3Q8WYN3 585 aa16.48■□□□□ 0.23
IFT20-213ENST00000583796 CEP164Q9UPV0 1460 aa16.47■□□□□ 0.23
IFT20-213ENST00000583796 NESP48681 1621 aa16.45■□□□□ 0.22
IFT20-213ENST00000583796 RUSC2Q8N2Y8 1516 aa16.44■□□□□ 0.22
IFT20-213ENST00000583796 GOLGA3Q08378 1498 aa16.44■□□□□ 0.22
IFT20-213ENST00000583796 KIF27Q86VH2 1401 aa16.42■□□□□ 0.22
IFT20-213ENST00000583796 FGD5Q6ZNL6 1462 aa16.39■□□□□ 0.21
IFT20-213ENST00000583796 TNIKQ9UKE5 1360 aa16.39■□□□□ 0.21
IFT20-213ENST00000583796 TOPBP1Q92547 1522 aa16.39■□□□□ 0.21
IFT20-213ENST00000583796 ERICH3Q5RHP9 1530 aa16.38■□□□□ 0.21
IFT20-213ENST00000583796 KIF21AQ7Z4S6 1674 aa16.34■□□□□ 0.21
IFT20-213ENST00000583796 DNAJC5BQ9UF47 199 aa16.33■□□□□ 0.2
IFT20-213ENST00000583796 PRXQ9BXM0 1461 aa16.33■□□□□ 0.2
IFT20-213ENST00000583796 POLA1P09884 1462 aaPredicted RBP16.32■□□□□ 0.2
IFT20-213ENST00000583796 URB2Q14146 1524 aaKnown RBP16.32■□□□□ 0.2
IFT20-213ENST00000583796 ABCA10Q8WWZ4 1543 aa16.31■□□□□ 0.2
IFT20-213ENST00000583796 CUX2O14529 1486 aa16.29■□□□□ 0.2
IFT20-213ENST00000583796 CEP162Q5TB80 1403 aa16.27■□□□□ 0.19
IFT20-213ENST00000583796 WDR97A6NE52 1622 aa16.26■□□□□ 0.19
IFT20-213ENST00000583796 MRC2Q9UBG0 1479 aa16.26■□□□□ 0.19
IFT20-213ENST00000583796 RAPGEF2Q9Y4G8 1499 aa16.25■□□□□ 0.19
IFT20-213ENST00000583796 UBTFP17480 764 aaKnown RBP16.22■□□□□ 0.19
IFT20-213ENST00000583796 WDR62O43379 1518 aa16.2■□□□□ 0.18
IFT20-213ENST00000583796 CUL7Q14999 1698 aa16.19■□□□□ 0.18
IFT20-213ENST00000583796 IGF1RP08069 1367 aa16.19■□□□□ 0.18
IFT20-213ENST00000583796 RAD54L2Q9Y4B4 1467 aa16.18■□□□□ 0.18
IFT20-213ENST00000583796 ABCA5Q8WWZ7 1642 aa16.18■□□□□ 0.18
IFT20-213ENST00000583796 EHMT2Q96KQ7 1210 aa16.17■□□□□ 0.18
IFT20-213ENST00000583796 TARBP1Q13395 1621 aaKnown RBP16.16■□□□□ 0.18
IFT20-213ENST00000583796 CARMIL1Q5VZK9 1371 aa16.13■□□□□ 0.17
IFT20-213ENST00000583796 CLIP1P30622 1438 aa16.13■□□□□ 0.17
IFT20-213ENST00000583796 ERCC6Q03468 1493 aa16.11■□□□□ 0.17
IFT20-213ENST00000583796 IFT140Q96RY7 1462 aa16.09■□□□□ 0.17
IFT20-213ENST00000583796 THOC2Q8NI27 1593 aaKnown RBP16.09■□□□□ 0.17
IFT20-213ENST00000583796 GAPVD1Q14C86 1478 aa16.09■□□□□ 0.17
IFT20-213ENST00000583796 SCAF1Q9H7N4 1312 aaKnown RBP16.05■□□□□ 0.16
IFT20-213ENST00000583796 VPS8Q8N3P4 1428 aa16.04■□□□□ 0.16
IFT20-213ENST00000583796 TRIM26Q12899 539 aaPredicted RBP16.03■□□□□ 0.16
IFT20-213ENST00000583796 PBRM1Q86U86 1689 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms