RNA–Protein interactions for RNA: ENST00000583478.1

CYB561-218, Transcript of cytochrome b561, humanhuman

TSL 3

Gene CYB561, Length 561 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561-218ENST00000583478 NISCHQ9Y2I1 1504 aa46.54■■■■■ 5.04
CYB561-218ENST00000583478 CCDC180Q9P1Z9 1646 aa41.22■■■■■ 4.19
CYB561-218ENST00000583478 ABCC9O60706 1549 aa39.74■■■■□ 3.95
CYB561-218ENST00000583478 ZCCHC6Q5VYS8 1495 aaKnown RBP38.89■■■■□ 3.82
CYB561-218ENST00000583478 MYO15BQ96JP2 1530 aa38.66■■■■□ 3.78
CYB561-218ENST00000583478 NACADO15069 1562 aa38.65■■■■□ 3.78
CYB561-218ENST00000583478 DCAF1Q9Y4B6 1507 aa38.64■■■■□ 3.78
CYB561-218ENST00000583478 DCAF8L2P0C7V8 631 aa38.56■■■■□ 3.76
CYB561-218ENST00000583478 RB1CC1Q8TDY2 1594 aa38.55■■■■□ 3.76
CYB561-218ENST00000583478 UNC13AQ9UPW8 1703 aa37.55■■■■□ 3.6
CYB561-218ENST00000583478 SCRIBQ14160 1630 aa37.51■■■■□ 3.6
CYB561-218ENST00000583478 BICRAQ9NZM4 1560 aa37.29■■■■□ 3.56
CYB561-218ENST00000583478 PABPN1Q86U42 306 aaKnown RBP eCLIP37.18■■■■□ 3.54
CYB561-218ENST00000583478 SHROOM4Q9ULL8 1493 aa37.15■■■■□ 3.54
CYB561-218ENST00000583478 EIF4G1Q04637 1599 aaKnown RBP36.3■■■■□ 3.4
CYB561-218ENST00000583478 CECR2Q9BXF3 1484 aa36.11■■■■□ 3.37
CYB561-218ENST00000583478 BAZ1AQ9NRL2 1556 aaPredicted RBP36.08■■■■□ 3.37
CYB561-218ENST00000583478 SMARCA4P51532 1647 aa36■■■■□ 3.35
CYB561-218ENST00000583478 CC2D2AQ9P2K1 1620 aa36■■■■□ 3.35
CYB561-218ENST00000583478 DNAJC5BQ9UF47 199 aa35.99■■■■□ 3.35
CYB561-218ENST00000583478 MROH2BQ7Z745 1585 aa35.82■■■■□ 3.32
CYB561-218ENST00000583478 SMARCA2P51531 1590 aa35.73■■■■□ 3.31
CYB561-218ENST00000583478 PEG3Q9GZU2 1588 aa35.72■■■■□ 3.31
CYB561-218ENST00000583478 ATAD2BQ9ULI0 1458 aa35.7■■■■□ 3.31
CYB561-218ENST00000583478 NCAPD3P42695 1498 aa35.65■■■■□ 3.3
CYB561-218ENST00000583478 RSF1Q96T23 1441 aaPredicted RBP35.62■■■■□ 3.29
CYB561-218ENST00000583478 HMGXB3Q12766 1538 aa35.53■■■■□ 3.28
CYB561-218ENST00000583478 BAZ1BQ9UIG0 1483 aaKnown RBP35.43■■■■□ 3.26
CYB561-218ENST00000583478 WIZO95785 1651 aa35.43■■■■□ 3.26
CYB561-218ENST00000583478 TOP2AP11388 1531 aaKnown RBP35.17■■■■□ 3.22
CYB561-218ENST00000583478 SUPT5HO00267 1087 aaKnown RBP34.98■■■■□ 3.19
CYB561-218ENST00000583478 CCDC88BA6NC98 1476 aa34.71■■■■□ 3.15
CYB561-218ENST00000583478 LAMC3Q9Y6N6 1575 aa34.63■■■■□ 3.13
CYB561-218ENST00000583478 CADPSQ9ULU8 1353 aa34.62■■■■□ 3.13
CYB561-218ENST00000583478 CFTRP13569 1480 aa34.52■■■■□ 3.12
CYB561-218ENST00000583478 NESP48681 1621 aa34.5■■■■□ 3.11
CYB561-218ENST00000583478 PDS5BQ9NTI5 1447 aa34.4■■■■□ 3.1
CYB561-218ENST00000583478 ERCC6Q03468 1493 aa34.27■■■■□ 3.08
CYB561-218ENST00000583478 PRDM2Q13029 1718 aa34.26■■■■□ 3.07
CYB561-218ENST00000583478 FANCD2Q9BXW9 1451 aa34.2■■■■□ 3.06
CYB561-218ENST00000583478 CEP164Q9UPV0 1460 aa34.13■■■■□ 3.05
CYB561-218ENST00000583478 KIF21AQ7Z4S6 1674 aa34.12■■■■□ 3.05
CYB561-218ENST00000583478 MRC2Q9UBG0 1479 aa33.97■■■■□ 3.03
CYB561-218ENST00000583478 THOC2Q8NI27 1593 aaKnown RBP33.95■■■■□ 3.03
CYB561-218ENST00000583478 WDR62O43379 1518 aa33.84■■■■□ 3.01
CYB561-218ENST00000583478 ABCC8Q09428 1581 aa33.83■■■■□ 3.01
CYB561-218ENST00000583478 CUX2O14529 1486 aa33.82■■■■□ 3.01
CYB561-218ENST00000583478 URB2Q14146 1524 aaKnown RBP33.79■■■■□ 3
CYB561-218ENST00000583478 DNMBPQ6XZF7 1577 aa33.72■■■□□ 2.99
CYB561-218ENST00000583478 TOPBP1Q92547 1522 aa33.69■■■□□ 2.98
CYB561-218ENST00000583478 WRNQ14191 1432 aaPredicted RBP eCLIP33.6■■■□□ 2.97
CYB561-218ENST00000583478 CUX1P39880 1505 aa33.59■■■□□ 2.97
CYB561-218ENST00000583478 TOP2BQ02880 1626 aa33.47■■■□□ 2.95
CYB561-218ENST00000583478 BIVM-ERCC5R4GMW8 1640 aa33.46■■■□□ 2.95
CYB561-218ENST00000583478 POLA1P09884 1462 aaPredicted RBP33.44■■■□□ 2.94
CYB561-218ENST00000583478 SYNJ1O43426 1573 aa33.42■■■□□ 2.94
CYB561-218ENST00000583478 FGD5Q6ZNL6 1462 aa33.41■■■□□ 2.94
CYB561-218ENST00000583478 IFT140Q96RY7 1462 aa33.41■■■□□ 2.94
CYB561-218ENST00000583478 SOGA1O94964 1423 aa33.32■■■□□ 2.92
CYB561-218ENST00000583478 TARBP1Q13395 1621 aaKnown RBP33.28■■■□□ 2.92
CYB561-218ENST00000583478 RAD54L2Q9Y4B4 1467 aa33.23■■■□□ 2.91
CYB561-218ENST00000583478 WDR97A6NE52 1622 aa33.18■■■□□ 2.9
CYB561-218ENST00000583478 ABCA10Q8WWZ4 1543 aa33.18■■■□□ 2.9
CYB561-218ENST00000583478 ZNF608Q9ULD9 1512 aaPredicted RBP33.11■■■□□ 2.89
CYB561-218ENST00000583478 TRIM41Q8WV44 630 aa33.1■■■□□ 2.89
CYB561-218ENST00000583478 EIF4G3O43432 1585 aaKnown RBP33.04■■■□□ 2.88
CYB561-218ENST00000583478 TDRD9Q8NDG6 1382 aaKnown RBP33.01■■■□□ 2.88
CYB561-218ENST00000583478 AQRO60306 1485 aaKnown RBP eCLIP32.99■■■□□ 2.87
CYB561-218ENST00000583478 CHIC1Q5VXU3 224 aa32.98■■■□□ 2.87
CYB561-218ENST00000583478 ABCA5Q8WWZ7 1642 aa32.95■■■□□ 2.87
CYB561-218ENST00000583478 GAPVD1Q14C86 1478 aa32.95■■■□□ 2.87
CYB561-218ENST00000583478 GRIN2BQ13224 1484 aa32.91■■■□□ 2.86
CYB561-218ENST00000583478 KIF27Q86VH2 1401 aa32.89■■■□□ 2.86
CYB561-218ENST00000583478 ERICH3Q5RHP9 1530 aa32.81■■■□□ 2.84
CYB561-218ENST00000583478 PBRM1Q86U86 1689 aa32.8■■■□□ 2.84
CYB561-218ENST00000583478 MAGI1Q96QZ7 1491 aaPredicted RBP32.8■■■□□ 2.84
CYB561-218ENST00000583478 SNAPC4Q5SXM2 1469 aa32.74■■■□□ 2.83
CYB561-218ENST00000583478 IGF1RP08069 1367 aa32.66■■■□□ 2.82
CYB561-218ENST00000583478 EEA1Q15075 1411 aa32.65■■■□□ 2.82
CYB561-218ENST00000583478 SYNJ2O15056 1496 aa32.63■■■□□ 2.81
CYB561-218ENST00000583478 FHAD1B1AJZ9 1412 aa32.62■■■□□ 2.81
CYB561-218ENST00000583478 ADAMTS12P58397 1594 aa32.61■■■□□ 2.81
CYB561-218ENST00000583478 RUSC2Q8N2Y8 1516 aa32.58■■■□□ 2.81
CYB561-218ENST00000583478 CUL7Q14999 1698 aa32.58■■■□□ 2.81
CYB561-218ENST00000583478 CHMP7Q8WUX9 453 aaPredicted RBP32.55■■■□□ 2.8
CYB561-218ENST00000583478 FBLN2P98095 1184 aa32.49■■■□□ 2.79
CYB561-218ENST00000583478 CHD1O14646 1710 aa32.48■■■□□ 2.79
CYB561-218ENST00000583478 CARMIL1Q5VZK9 1371 aa32.48■■■□□ 2.79
CYB561-218ENST00000583478 OSCARQ8IYS5 282 aa32.46■■■□□ 2.79
CYB561-218ENST00000583478 GRIN2AQ12879 1464 aa32.46■■■□□ 2.79
CYB561-218ENST00000583478 CSRNP3Q8WYN3 585 aa32.43■■■□□ 2.78
CYB561-218ENST00000583478 PRXQ9BXM0 1461 aa32.36■■■□□ 2.77
CYB561-218ENST00000583478 RAPGEF2Q9Y4G8 1499 aa32.35■■■□□ 2.77
CYB561-218ENST00000583478 NUP160Q12769 1436 aa32.32■■■□□ 2.76
CYB561-218ENST00000583478 FAM9AQ8IZU1 332 aaPredicted RBP32.28■■■□□ 2.76
CYB561-218ENST00000583478 CEP170Q5SW79 1584 aa32.23■■■□□ 2.75
CYB561-218ENST00000583478 CLASP1Q7Z460 1538 aa32.22■■■□□ 2.75
CYB561-218ENST00000583478 KIF21BO75037 1637 aa32.18■■■□□ 2.74
CYB561-218ENST00000583478 DNAJC5Q9H3Z4 198 aa32.16■■■□□ 2.74
CYB561-218ENST00000583478 KIAA0586Q9BVV6 1533 aa32.14■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms