RNA–Protein interactions for RNA: ENST00000582665.5

NDEL1-214, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 3

Gene NDEL1, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-214ENST00000582665 NISCHQ9Y2I1 1504 aa24.05■■□□□ 1.44
NDEL1-214ENST00000582665 CCDC180Q9P1Z9 1646 aa21.26■□□□□ 0.99
NDEL1-214ENST00000582665 ABCC9O60706 1549 aa20.51■□□□□ 0.87
NDEL1-214ENST00000582665 ZCCHC6Q5VYS8 1495 aaKnown RBP20.11■□□□□ 0.81
NDEL1-214ENST00000582665 MYO15BQ96JP2 1530 aa19.97■□□□□ 0.79
NDEL1-214ENST00000582665 DCAF1Q9Y4B6 1507 aa19.97■□□□□ 0.79
NDEL1-214ENST00000582665 NACADO15069 1562 aa19.94■□□□□ 0.78
NDEL1-214ENST00000582665 RB1CC1Q8TDY2 1594 aa19.87■□□□□ 0.77
NDEL1-214ENST00000582665 DCAF8L2P0C7V8 631 aa19.85■□□□□ 0.77
NDEL1-214ENST00000582665 UNC13AQ9UPW8 1703 aa19.4■□□□□ 0.7
NDEL1-214ENST00000582665 SCRIBQ14160 1630 aa19.36■□□□□ 0.69
NDEL1-214ENST00000582665 BICRAQ9NZM4 1560 aa19.3■□□□□ 0.68
NDEL1-214ENST00000582665 PABPN1Q86U42 306 aaKnown RBP eCLIP19.2■□□□□ 0.66
NDEL1-214ENST00000582665 SHROOM4Q9ULL8 1493 aa19.15■□□□□ 0.66
NDEL1-214ENST00000582665 EIF4G1Q04637 1599 aaKnown RBP18.74■□□□□ 0.59
NDEL1-214ENST00000582665 CECR2Q9BXF3 1484 aa18.71■□□□□ 0.59
NDEL1-214ENST00000582665 DNAJC5BQ9UF47 199 aa18.64■□□□□ 0.57
NDEL1-214ENST00000582665 BAZ1AQ9NRL2 1556 aaPredicted RBP18.61■□□□□ 0.57
NDEL1-214ENST00000582665 SMARCA4P51532 1647 aa18.59■□□□□ 0.57
NDEL1-214ENST00000582665 CC2D2AQ9P2K1 1620 aa18.58■□□□□ 0.56
NDEL1-214ENST00000582665 MROH2BQ7Z745 1585 aa18.53■□□□□ 0.56
NDEL1-214ENST00000582665 PEG3Q9GZU2 1588 aa18.47■□□□□ 0.55
NDEL1-214ENST00000582665 ATAD2BQ9ULI0 1458 aa18.45■□□□□ 0.54
NDEL1-214ENST00000582665 RSF1Q96T23 1441 aaPredicted RBP18.43■□□□□ 0.54
NDEL1-214ENST00000582665 NCAPD3P42695 1498 aa18.42■□□□□ 0.54
NDEL1-214ENST00000582665 SMARCA2P51531 1590 aa18.42■□□□□ 0.54
NDEL1-214ENST00000582665 HMGXB3Q12766 1538 aa18.33■□□□□ 0.53
NDEL1-214ENST00000582665 WIZO95785 1651 aa18.31■□□□□ 0.52
NDEL1-214ENST00000582665 BAZ1BQ9UIG0 1483 aaKnown RBP18.26■□□□□ 0.51
NDEL1-214ENST00000582665 TOP2AP11388 1531 aaKnown RBP18.16■□□□□ 0.5
NDEL1-214ENST00000582665 SUPT5HO00267 1087 aaKnown RBP18.04■□□□□ 0.48
NDEL1-214ENST00000582665 CCDC88BA6NC98 1476 aa17.95■□□□□ 0.46
NDEL1-214ENST00000582665 CADPSQ9ULU8 1353 aa17.87■□□□□ 0.45
NDEL1-214ENST00000582665 LAMC3Q9Y6N6 1575 aa17.85■□□□□ 0.45
NDEL1-214ENST00000582665 NESP48681 1621 aa17.84■□□□□ 0.45
NDEL1-214ENST00000582665 CFTRP13569 1480 aa17.83■□□□□ 0.45
NDEL1-214ENST00000582665 PDS5BQ9NTI5 1447 aa17.72■□□□□ 0.43
NDEL1-214ENST00000582665 PRDM2Q13029 1718 aa17.66■□□□□ 0.42
NDEL1-214ENST00000582665 FANCD2Q9BXW9 1451 aa17.63■□□□□ 0.41
NDEL1-214ENST00000582665 ERCC6Q03468 1493 aa17.63■□□□□ 0.41
NDEL1-214ENST00000582665 KIF21AQ7Z4S6 1674 aa17.61■□□□□ 0.41
NDEL1-214ENST00000582665 CEP164Q9UPV0 1460 aa17.58■□□□□ 0.41
NDEL1-214ENST00000582665 THOC2Q8NI27 1593 aaKnown RBP17.53■□□□□ 0.4
NDEL1-214ENST00000582665 MRC2Q9UBG0 1479 aa17.52■□□□□ 0.4
NDEL1-214ENST00000582665 WDR62O43379 1518 aa17.47■□□□□ 0.39
NDEL1-214ENST00000582665 URB2Q14146 1524 aaKnown RBP17.47■□□□□ 0.39
NDEL1-214ENST00000582665 ABCC8Q09428 1581 aa17.42■□□□□ 0.38
NDEL1-214ENST00000582665 CUX2O14529 1486 aa17.42■□□□□ 0.38
NDEL1-214ENST00000582665 TOPBP1Q92547 1522 aa17.4■□□□□ 0.38
NDEL1-214ENST00000582665 DNMBPQ6XZF7 1577 aa17.4■□□□□ 0.38
NDEL1-214ENST00000582665 CUX1P39880 1505 aa17.37■□□□□ 0.37
NDEL1-214ENST00000582665 WRNQ14191 1432 aaPredicted RBP eCLIP17.34■□□□□ 0.37
NDEL1-214ENST00000582665 TOP2BQ02880 1626 aa17.29■□□□□ 0.36
NDEL1-214ENST00000582665 SYNJ1O43426 1573 aa17.28■□□□□ 0.36
NDEL1-214ENST00000582665 BIVM-ERCC5R4GMW8 1640 aa17.28■□□□□ 0.36
NDEL1-214ENST00000582665 POLA1P09884 1462 aaPredicted RBP17.27■□□□□ 0.36
NDEL1-214ENST00000582665 FGD5Q6ZNL6 1462 aa17.25■□□□□ 0.35
NDEL1-214ENST00000582665 IFT140Q96RY7 1462 aa17.22■□□□□ 0.35
NDEL1-214ENST00000582665 TARBP1Q13395 1621 aaKnown RBP17.2■□□□□ 0.34
NDEL1-214ENST00000582665 SOGA1O94964 1423 aa17.19■□□□□ 0.34
NDEL1-214ENST00000582665 RAD54L2Q9Y4B4 1467 aa17.17■□□□□ 0.34
NDEL1-214ENST00000582665 ABCA10Q8WWZ4 1543 aa17.13■□□□□ 0.33
NDEL1-214ENST00000582665 ZNF608Q9ULD9 1512 aaPredicted RBP17.12■□□□□ 0.33
NDEL1-214ENST00000582665 WDR97A6NE52 1622 aa17.1■□□□□ 0.33
NDEL1-214ENST00000582665 CHIC1Q5VXU3 224 aa17.07■□□□□ 0.32
NDEL1-214ENST00000582665 TRIM41Q8WV44 630 aa17.06■□□□□ 0.32
NDEL1-214ENST00000582665 TDRD9Q8NDG6 1382 aaKnown RBP17.05■□□□□ 0.32
NDEL1-214ENST00000582665 EIF4G3O43432 1585 aaKnown RBP17.05■□□□□ 0.32
NDEL1-214ENST00000582665 AQRO60306 1485 aaKnown RBP eCLIP17.05■□□□□ 0.326e-9■■■■□ 20
NDEL1-214ENST00000582665 ABCA5Q8WWZ7 1642 aa17.03■□□□□ 0.32
NDEL1-214ENST00000582665 GAPVD1Q14C86 1478 aa16.99■□□□□ 0.31
NDEL1-214ENST00000582665 GRIN2BQ13224 1484 aa16.97■□□□□ 0.31
NDEL1-214ENST00000582665 KIF27Q86VH2 1401 aa16.95■□□□□ 0.3
NDEL1-214ENST00000582665 ERICH3Q5RHP9 1530 aa16.92■□□□□ 0.3
NDEL1-214ENST00000582665 MAGI1Q96QZ7 1491 aaPredicted RBP16.91■□□□□ 0.3
NDEL1-214ENST00000582665 PBRM1Q86U86 1689 aa16.91■□□□□ 0.3
NDEL1-214ENST00000582665 SNAPC4Q5SXM2 1469 aa16.89■□□□□ 0.29
NDEL1-214ENST00000582665 IGF1RP08069 1367 aa16.89■□□□□ 0.29
NDEL1-214ENST00000582665 RUSC2Q8N2Y8 1516 aa16.88■□□□□ 0.29
NDEL1-214ENST00000582665 SYNJ2O15056 1496 aa16.83■□□□□ 0.28
NDEL1-214ENST00000582665 ADAMTS12P58397 1594 aa16.83■□□□□ 0.28
NDEL1-214ENST00000582665 FHAD1B1AJZ9 1412 aa16.82■□□□□ 0.28
NDEL1-214ENST00000582665 EEA1Q15075 1411 aa16.82■□□□□ 0.28
NDEL1-214ENST00000582665 CUL7Q14999 1698 aa16.78■□□□□ 0.28
NDEL1-214ENST00000582665 CARMIL1Q5VZK9 1371 aa16.77■□□□□ 0.27
NDEL1-214ENST00000582665 CHD1O14646 1710 aa16.76■□□□□ 0.27
NDEL1-214ENST00000582665 CHMP7Q8WUX9 453 aaPredicted RBP16.75■□□□□ 0.27
NDEL1-214ENST00000582665 GRIN2AQ12879 1464 aa16.74■□□□□ 0.27
NDEL1-214ENST00000582665 CSRNP3Q8WYN3 585 aa16.74■□□□□ 0.27
NDEL1-214ENST00000582665 PRXQ9BXM0 1461 aa16.73■□□□□ 0.27
NDEL1-214ENST00000582665 FBLN2P98095 1184 aa16.71■□□□□ 0.27
NDEL1-214ENST00000582665 OSCARQ8IYS5 282 aa16.71■□□□□ 0.27
NDEL1-214ENST00000582665 NUP160Q12769 1436 aa16.7■□□□□ 0.26
NDEL1-214ENST00000582665 RAPGEF2Q9Y4G8 1499 aa16.68■□□□□ 0.26
NDEL1-214ENST00000582665 FAM9AQ8IZU1 332 aaPredicted RBP16.65■□□□□ 0.26
NDEL1-214ENST00000582665 CLASP1Q7Z460 1538 aa16.65■□□□□ 0.26
NDEL1-214ENST00000582665 CEP170Q5SW79 1584 aa16.64■□□□□ 0.25
NDEL1-214ENST00000582665 KIF21BO75037 1637 aa16.62■□□□□ 0.25
NDEL1-214ENST00000582665 DNAJC5Q9H3Z4 198 aa16.59■□□□□ 0.25
NDEL1-214ENST00000582665 KIAA0586Q9BVV6 1533 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms