RNA–Protein interactions for RNA: ENST00000581994.1

MED13-204, Transcript of mediator complex subunit 13, humanhuman

Gene MED13, Length 2,213 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED13-204ENST00000581994 NISCHQ9Y2I1 1504 aa22.86■■□□□ 1.25
MED13-204ENST00000581994 CCDC180Q9P1Z9 1646 aa20.16■□□□□ 0.82
MED13-204ENST00000581994 ABCC9O60706 1549 aa19.4■□□□□ 0.7
MED13-204ENST00000581994 ZCCHC6Q5VYS8 1495 aaKnown RBP19.13■□□□□ 0.65
MED13-204ENST00000581994 DCAF8L2P0C7V8 631 aa18.94■□□□□ 0.62
MED13-204ENST00000581994 DCAF1Q9Y4B6 1507 aa18.93■□□□□ 0.62
MED13-204ENST00000581994 MYO15BQ96JP2 1530 aa18.88■□□□□ 0.61
MED13-204ENST00000581994 NACADO15069 1562 aa18.87■□□□□ 0.61
MED13-204ENST00000581994 RB1CC1Q8TDY2 1594 aa18.8■□□□□ 0.6
MED13-204ENST00000581994 SCRIBQ14160 1630 aa18.44■□□□□ 0.54
MED13-204ENST00000581994 UNC13AQ9UPW8 1703 aa18.39■□□□□ 0.54
MED13-204ENST00000581994 SHROOM4Q9ULL8 1493 aa18.29■□□□□ 0.52
MED13-204ENST00000581994 BICRAQ9NZM4 1560 aa18.24■□□□□ 0.51
MED13-204ENST00000581994 PABPN1Q86U42 306 aaKnown RBP eCLIP18.19■□□□□ 0.5
MED13-204ENST00000581994 CECR2Q9BXF3 1484 aa17.78■□□□□ 0.44
MED13-204ENST00000581994 EIF4G1Q04637 1599 aaKnown RBP17.73■□□□□ 0.43
MED13-204ENST00000581994 BAZ1AQ9NRL2 1556 aaPredicted RBP17.69■□□□□ 0.42
MED13-204ENST00000581994 SMARCA4P51532 1647 aa17.67■□□□□ 0.42
MED13-204ENST00000581994 MROH2BQ7Z745 1585 aa17.63■□□□□ 0.41
MED13-204ENST00000581994 CC2D2AQ9P2K1 1620 aa17.56■□□□□ 0.4
MED13-204ENST00000581994 RSF1Q96T23 1441 aaPredicted RBP17.56■□□□□ 0.4
MED13-204ENST00000581994 DNAJC5BQ9UF47 199 aa17.49■□□□□ 0.39
MED13-204ENST00000581994 PEG3Q9GZU2 1588 aa17.49■□□□□ 0.39
MED13-204ENST00000581994 ATAD2BQ9ULI0 1458 aa17.49■□□□□ 0.39
MED13-204ENST00000581994 SMARCA2P51531 1590 aa17.47■□□□□ 0.39
MED13-204ENST00000581994 WIZO95785 1651 aa17.46■□□□□ 0.39
MED13-204ENST00000581994 NCAPD3P42695 1498 aa17.41■□□□□ 0.38
MED13-204ENST00000581994 AEBP2Q6ZN18 517 aaPredicted RBP17.39■□□□□ 0.37
MED13-204ENST00000581994 SUPT5HO00267 1087 aaKnown RBP17.37■□□□□ 0.37
MED13-204ENST00000581994 HMGXB3Q12766 1538 aa17.37■□□□□ 0.37
MED13-204ENST00000581994 BAZ1BQ9UIG0 1483 aaKnown RBP17.36■□□□□ 0.37
MED13-204ENST00000581994 TOP2AP11388 1531 aaKnown RBP17.29■□□□□ 0.36
MED13-204ENST00000581994 CCDC88BA6NC98 1476 aa17.09■□□□□ 0.33
MED13-204ENST00000581994 CADPSQ9ULU8 1353 aa16.92■□□□□ 0.3
MED13-204ENST00000581994 CFTRP13569 1480 aa16.91■□□□□ 0.3
MED13-204ENST00000581994 NESP48681 1621 aa16.9■□□□□ 0.3
MED13-204ENST00000581994 LAMC3Q9Y6N6 1575 aa16.89■□□□□ 0.29
MED13-204ENST00000581994 PELP1Q8IZL8 1130 aaKnown RBP16.82■□□□□ 0.28
MED13-204ENST00000581994 PRDM2Q13029 1718 aa16.8■□□□□ 0.28
MED13-204ENST00000581994 PDS5BQ9NTI5 1447 aa16.76■□□□□ 0.27
MED13-204ENST00000581994 FANCD2Q9BXW9 1451 aa16.73■□□□□ 0.27
MED13-204ENST00000581994 KIF21AQ7Z4S6 1674 aa16.7■□□□□ 0.26
MED13-204ENST00000581994 ERCC6Q03468 1493 aa16.68■□□□□ 0.26
MED13-204ENST00000581994 CEP164Q9UPV0 1460 aa16.67■□□□□ 0.26
MED13-204ENST00000581994 MYT1Q01538 1121 aa16.66■□□□□ 0.26
MED13-204ENST00000581994 ABCC8Q09428 1581 aa16.58■□□□□ 0.24
MED13-204ENST00000581994 MRC2Q9UBG0 1479 aa16.58■□□□□ 0.24
MED13-204ENST00000581994 THOC2Q8NI27 1593 aaKnown RBP16.57■□□□□ 0.24
MED13-204ENST00000581994 URB2Q14146 1524 aaKnown RBP16.55■□□□□ 0.24
MED13-204ENST00000581994 WRNQ14191 1432 aaPredicted RBP eCLIP16.54■□□□□ 0.24
MED13-204ENST00000581994 CUX1P39880 1505 aa16.52■□□□□ 0.24
MED13-204ENST00000581994 WDR62O43379 1518 aa16.52■□□□□ 0.24
MED13-204ENST00000581994 DNMBPQ6XZF7 1577 aa16.52■□□□□ 0.23
MED13-204ENST00000581994 TOPBP1Q92547 1522 aa16.51■□□□□ 0.23
MED13-204ENST00000581994 SYNJ1O43426 1573 aa16.49■□□□□ 0.23
MED13-204ENST00000581994 TOP2BQ02880 1626 aa16.46■□□□□ 0.23
MED13-204ENST00000581994 BIVM-ERCC5R4GMW8 1640 aa16.46■□□□□ 0.22
MED13-204ENST00000581994 CHIC1Q5VXU3 224 aa16.43■□□□□ 0.22
MED13-204ENST00000581994 FGD5Q6ZNL6 1462 aa16.41■□□□□ 0.22
MED13-204ENST00000581994 POLA1P09884 1462 aaPredicted RBP16.4■□□□□ 0.22
MED13-204ENST00000581994 TRIM41Q8WV44 630 aa16.38■□□□□ 0.21
MED13-204ENST00000581994 CUX2O14529 1486 aa16.38■□□□□ 0.21
MED13-204ENST00000581994 RAD54L2Q9Y4B4 1467 aa16.32■□□□□ 0.2
MED13-204ENST00000581994 SOGA1O94964 1423 aa16.32■□□□□ 0.2
MED13-204ENST00000581994 IFT140Q96RY7 1462 aa16.31■□□□□ 0.2
MED13-204ENST00000581994 TARBP1Q13395 1621 aaKnown RBP16.3■□□□□ 0.2
MED13-204ENST00000581994 ABCA10Q8WWZ4 1543 aa16.27■□□□□ 0.19
MED13-204ENST00000581994 WDR97A6NE52 1622 aa16.25■□□□□ 0.19
MED13-204ENST00000581994 ZNF608Q9ULD9 1512 aaPredicted RBP16.22■□□□□ 0.19
MED13-204ENST00000581994 TDRD9Q8NDG6 1382 aaKnown RBP16.2■□□□□ 0.18
MED13-204ENST00000581994 TTBK1Q5TCY1 1321 aaPredicted RBP16.18■□□□□ 0.18
MED13-204ENST00000581994 ABCA5Q8WWZ7 1642 aa16.17■□□□□ 0.18
MED13-204ENST00000581994 AQRO60306 1485 aaKnown RBP eCLIP16.17■□□□□ 0.183e-7■■■□□ 16.9
MED13-204ENST00000581994 EIF4G3O43432 1585 aaKnown RBP16.17■□□□□ 0.18
MED13-204ENST00000581994 KIF27Q86VH2 1401 aa16.16■□□□□ 0.18
MED13-204ENST00000581994 GAPVD1Q14C86 1478 aa16.14■□□□□ 0.17
MED13-204ENST00000581994 RUSC2Q8N2Y8 1516 aa16.14■□□□□ 0.17
MED13-204ENST00000581994 GRIN2BQ13224 1484 aa16.09■□□□□ 0.17
MED13-204ENST00000581994 PBRM1Q86U86 1689 aa16.09■□□□□ 0.17
MED13-204ENST00000581994 EEA1Q15075 1411 aa16.08■□□□□ 0.17
MED13-204ENST00000581994 ERICH3Q5RHP9 1530 aa16.07■□□□□ 0.16
MED13-204ENST00000581994 IGF1RP08069 1367 aa16.06■□□□□ 0.16
MED13-204ENST00000581994 FAM9AQ8IZU1 332 aaPredicted RBP16.04■□□□□ 0.16
MED13-204ENST00000581994 SNAPC4Q5SXM2 1469 aa16.03■□□□□ 0.16
MED13-204ENST00000581994 MAGI1Q96QZ7 1491 aaPredicted RBP16.01■□□□□ 0.15
MED13-204ENST00000581994 CSRNP3Q8WYN3 585 aa16.01■□□□□ 0.15
MED13-204ENST00000581994 CUL7Q14999 1698 aa15.99■□□□□ 0.15
MED13-204ENST00000581994 ADAMTS12P58397 1594 aa15.99■□□□□ 0.15
MED13-204ENST00000581994 CARMIL1Q5VZK9 1371 aa15.97■□□□□ 0.15
MED13-204ENST00000581994 FHAD1B1AJZ9 1412 aa15.97■□□□□ 0.15
MED13-204ENST00000581994 PRXQ9BXM0 1461 aa15.95■□□□□ 0.14
MED13-204ENST00000581994 SYNJ2O15056 1496 aa15.95■□□□□ 0.14
MED13-204ENST00000581994 PRKCSHP14314 528 aaPredicted RBP15.94■□□□□ 0.14
MED13-204ENST00000581994 RAPGEF2Q9Y4G8 1499 aa15.91■□□□□ 0.14
MED13-204ENST00000581994 KIF21BO75037 1637 aa15.9■□□□□ 0.14
MED13-204ENST00000581994 SLC24A1O60721 1099 aa15.9■□□□□ 0.14
MED13-204ENST00000581994 CHMP7Q8WUX9 453 aaPredicted RBP15.9■□□□□ 0.14
MED13-204ENST00000581994 CHD1O14646 1710 aa15.89■□□□□ 0.13
MED13-204ENST00000581994 GRIN2AQ12879 1464 aa15.89■□□□□ 0.13
MED13-204ENST00000581994 FBLN2P98095 1184 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms