RNA–Protein interactions for RNA: ENST00000581583.1

RTTN-207, Transcript of rotatin, humanhuman

TSL 2

Gene RTTN, Length 2,355 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-207ENST00000581583 NISCHQ9Y2I1 1504 aa26.01■■□□□ 1.75
RTTN-207ENST00000581583 CCDC180Q9P1Z9 1646 aa22.35■■□□□ 1.17
RTTN-207ENST00000581583 ZCCHC6Q5VYS8 1495 aaKnown RBP21.94■■□□□ 1.1
RTTN-207ENST00000581583 SHROOM4Q9ULL8 1493 aa21.62■■□□□ 1.05
RTTN-207ENST00000581583 DCAF1Q9Y4B6 1507 aa21.49■■□□□ 1.03
RTTN-207ENST00000581583 DCAF8L2P0C7V8 631 aa21.41■■□□□ 1.02
RTTN-207ENST00000581583 SUPT5HO00267 1087 aaKnown RBP21.09■□□□□ 0.97
RTTN-207ENST00000581583 MYO15BQ96JP2 1530 aa21.06■□□□□ 0.96
RTTN-207ENST00000581583 ABCC9O60706 1549 aa20.77■□□□□ 0.92
RTTN-207ENST00000581583 NACADO15069 1562 aa20.76■□□□□ 0.91
RTTN-207ENST00000581583 SCRIBQ14160 1630 aa20.67■□□□□ 0.9
RTTN-207ENST00000581583 CHIC1Q5VXU3 224 aa20.46■□□□□ 0.87
RTTN-207ENST00000581583 RB1CC1Q8TDY2 1594 aa20.45■□□□□ 0.86
RTTN-207ENST00000581583 RSF1Q96T23 1441 aaPredicted RBP20.41■□□□□ 0.86
RTTN-207ENST00000581583 CECR2Q9BXF3 1484 aa20.19■□□□□ 0.82
RTTN-207ENST00000581583 MROH2BQ7Z745 1585 aa20.11■□□□□ 0.81
RTTN-207ENST00000581583 BAZ1AQ9NRL2 1556 aaPredicted RBP20.03■□□□□ 0.8
RTTN-207ENST00000581583 UNC13AQ9UPW8 1703 aa19.98■□□□□ 0.79
RTTN-207ENST00000581583 WIZO95785 1651 aa19.94■□□□□ 0.78
RTTN-207ENST00000581583 SMARCA4P51532 1647 aa19.84■□□□□ 0.77
RTTN-207ENST00000581583 BICRAQ9NZM4 1560 aa19.83■□□□□ 0.76
RTTN-207ENST00000581583 TRIM41Q8WV44 630 aa19.8■□□□□ 0.76
RTTN-207ENST00000581583 TOP2AP11388 1531 aaKnown RBP19.75■□□□□ 0.75
RTTN-207ENST00000581583 PABPN1Q86U42 306 aaKnown RBP eCLIP19.75■□□□□ 0.75
RTTN-207ENST00000581583 LOC105371045A0A1W2PR82 267 aa19.71■□□□□ 0.75
RTTN-207ENST00000581583 CCDC88BA6NC98 1476 aa19.61■□□□□ 0.73
RTTN-207ENST00000581583 EIF4G1Q04637 1599 aaKnown RBP19.6■□□□□ 0.73
RTTN-207ENST00000581583 PEG3Q9GZU2 1588 aa19.6■□□□□ 0.73
RTTN-207ENST00000581583 SMARCA2P51531 1590 aa19.59■□□□□ 0.73
RTTN-207ENST00000581583 ATAD2BQ9ULI0 1458 aa19.44■□□□□ 0.7
RTTN-207ENST00000581583 FAM9AQ8IZU1 332 aaPredicted RBP19.44■□□□□ 0.7
RTTN-207ENST00000581583 PCGF6Q9BYE7 350 aa19.35■□□□□ 0.69
RTTN-207ENST00000581583 BAZ1BQ9UIG0 1483 aaKnown RBP19.35■□□□□ 0.69
RTTN-207ENST00000581583 ABCC8Q09428 1581 aa19.33■□□□□ 0.68
RTTN-207ENST00000581583 TRIM26Q12899 539 aaPredicted RBP19.23■□□□□ 0.67
RTTN-207ENST00000581583 HRCP23327 699 aa19.21■□□□□ 0.67
RTTN-207ENST00000581583 NCAPD3P42695 1498 aa19.2■□□□□ 0.66
RTTN-207ENST00000581583 WRNQ14191 1432 aaPredicted RBP eCLIP19.18■□□□□ 0.66
RTTN-207ENST00000581583 EEA1Q15075 1411 aa19.18■□□□□ 0.66
RTTN-207ENST00000581583 HMGXB3Q12766 1538 aa19.17■□□□□ 0.66
RTTN-207ENST00000581583 EHMT2Q96KQ7 1210 aa19.14■□□□□ 0.65
RTTN-207ENST00000581583 SOGA1O94964 1423 aa19.12■□□□□ 0.65
RTTN-207ENST00000581583 CSRNP3Q8WYN3 585 aa19.07■□□□□ 0.64
RTTN-207ENST00000581583 SYNJ1O43426 1573 aa19.03■□□□□ 0.64
RTTN-207ENST00000581583 TNIKQ9UKE5 1360 aa19■□□□□ 0.63
RTTN-207ENST00000581583 RUSC2Q8N2Y8 1516 aa19■□□□□ 0.63
RTTN-207ENST00000581583 TOP2BQ02880 1626 aa18.93■□□□□ 0.62
RTTN-207ENST00000581583 CFTRP13569 1480 aa18.92■□□□□ 0.62
RTTN-207ENST00000581583 GOLGA3Q08378 1498 aa18.92■□□□□ 0.62
RTTN-207ENST00000581583 CEP162Q5TB80 1403 aa18.92■□□□□ 0.62
RTTN-207ENST00000581583 CEP164Q9UPV0 1460 aa18.88■□□□□ 0.61
RTTN-207ENST00000581583 UBTFP17480 764 aaKnown RBP18.88■□□□□ 0.61
RTTN-207ENST00000581583 BIVM-ERCC5R4GMW8 1640 aa18.86■□□□□ 0.61
RTTN-207ENST00000581583 KIF21BO75037 1637 aa18.85■□□□□ 0.61
RTTN-207ENST00000581583 CC2D2AQ9P2K1 1620 aa18.78■□□□□ 0.6
RTTN-207ENST00000581583 CADPSQ9ULU8 1353 aa18.76■□□□□ 0.59
RTTN-207ENST00000581583 CUX1P39880 1505 aa18.76■□□□□ 0.59
RTTN-207ENST00000581583 ZEB1P37275 1124 aaPredicted RBP18.73■□□□□ 0.59
RTTN-207ENST00000581583 PPARGC1BQ86YN6 1023 aaKnown RBP18.72■□□□□ 0.59
RTTN-207ENST00000581583 PRDM2Q13029 1718 aa18.71■□□□□ 0.58
RTTN-207ENST00000581583 RAPGEF2Q9Y4G8 1499 aa18.7■□□□□ 0.58
RTTN-207ENST00000581583 KIF27Q86VH2 1401 aa18.66■□□□□ 0.58
RTTN-207ENST00000581583 PRXQ9BXM0 1461 aa18.66■□□□□ 0.58
RTTN-207ENST00000581583 CLIP1P30622 1438 aa18.66■□□□□ 0.58
RTTN-207ENST00000581583 ERICH3Q5RHP9 1530 aa18.65■□□□□ 0.58
RTTN-207ENST00000581583 VPS8Q8N3P4 1428 aa18.56■□□□□ 0.56
RTTN-207ENST00000581583 FANCD2Q9BXW9 1451 aa18.53■□□□□ 0.56
RTTN-207ENST00000581583 FGD5Q6ZNL6 1462 aa18.48■□□□□ 0.55
RTTN-207ENST00000581583 CUX2O14529 1486 aa18.48■□□□□ 0.55
RTTN-207ENST00000581583 IGF1RP08069 1367 aa18.47■□□□□ 0.55
RTTN-207ENST00000581583 TTBK1Q5TCY1 1321 aaPredicted RBP18.45■□□□□ 0.54
RTTN-207ENST00000581583 APLP2Q06481 763 aa18.45■□□□□ 0.54
RTTN-207ENST00000581583 DNMBPQ6XZF7 1577 aa18.42■□□□□ 0.54
RTTN-207ENST00000581583 LAMC3Q9Y6N6 1575 aa18.42■□□□□ 0.54
RTTN-207ENST00000581583 RANGAP1P46060 587 aaPredicted RBP18.4■□□□□ 0.54
RTTN-207ENST00000581583 NESP48681 1621 aa18.39■□□□□ 0.54
RTTN-207ENST00000581583 ARAP1Q96P48 1450 aa18.38■□□□□ 0.53
RTTN-207ENST00000581583 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.38■□□□□ 0.53
RTTN-207ENST00000581583 CCER1Q8TC90 406 aaPredicted RBP18.38■□□□□ 0.53
RTTN-207ENST00000581583 CARMIL1Q5VZK9 1371 aa18.37■□□□□ 0.53
RTTN-207ENST00000581583 TOPBP1Q92547 1522 aa18.37■□□□□ 0.53
RTTN-207ENST00000581583 ABCA10Q8WWZ4 1543 aa18.35■□□□□ 0.53
RTTN-207ENST00000581583 POLA1P09884 1462 aaPredicted RBP18.33■□□□□ 0.53
RTTN-207ENST00000581583 PDS5BQ9NTI5 1447 aa18.32■□□□□ 0.52
RTTN-207ENST00000581583 ARHGAP35Q9NRY4 1499 aa18.3■□□□□ 0.52
RTTN-207ENST00000581583 RAD54L2Q9Y4B4 1467 aa18.28■□□□□ 0.52
RTTN-207ENST00000581583 URB2Q14146 1524 aaKnown RBP18.25■□□□□ 0.51
RTTN-207ENST00000581583 DNAJC5BQ9UF47 199 aa18.24■□□□□ 0.51
RTTN-207ENST00000581583 CUL7Q14999 1698 aa18.18■□□□□ 0.5
RTTN-207ENST00000581583 KANK4Q5T7N3 995 aaPredicted RBP18.18■□□□□ 0.5
RTTN-207ENST00000581583 HNRNPUL2Q1KMD3 747 aaKnown RBP18.17■□□□□ 0.5
RTTN-207ENST00000581583 MAP3K1Q13233 1512 aa18.15■□□□□ 0.5
RTTN-207ENST00000581583 WDR97A6NE52 1622 aa18.15■□□□□ 0.5
RTTN-207ENST00000581583 FHAD1B1AJZ9 1412 aa18.12■□□□□ 0.49
RTTN-207ENST00000581583 ABCA5Q8WWZ7 1642 aa18.1■□□□□ 0.49
RTTN-207ENST00000581583 RRBP1Q9P2E9 1410 aaKnown RBP18.1■□□□□ 0.49
RTTN-207ENST00000581583 KIF21AQ7Z4S6 1674 aa18.1■□□□□ 0.49
RTTN-207ENST00000581583 GAPVD1Q14C86 1478 aa18.1■□□□□ 0.49
RTTN-207ENST00000581583 TDRD9Q8NDG6 1382 aaKnown RBP18.1■□□□□ 0.49
RTTN-207ENST00000581583 EFCAB5A4FU69 1503 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 106.9 ms