RNA–Protein interactions for RNA: ENST00000580392.5

RHOT1-207, Transcript of ras homolog family member T1, humanhuman

TSL 3

Gene RHOT1, Length 650 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHOT1-207ENST00000580392 NISCHQ9Y2I1 1504 aa21.96■■□□□ 1.11
RHOT1-207ENST00000580392 CCDC180Q9P1Z9 1646 aa19.19■□□□□ 0.66
RHOT1-207ENST00000580392 ZCCHC6Q5VYS8 1495 aaKnown RBP18.43■□□□□ 0.54
RHOT1-207ENST00000580392 DCAF1Q9Y4B6 1507 aa18.28■□□□□ 0.52
RHOT1-207ENST00000580392 MYO15BQ96JP2 1530 aa18.14■□□□□ 0.49
RHOT1-207ENST00000580392 ABCC9O60706 1549 aa18.06■□□□□ 0.48
RHOT1-207ENST00000580392 DCAF8L2P0C7V8 631 aa18■□□□□ 0.47
RHOT1-207ENST00000580392 NACADO15069 1562 aa17.94■□□□□ 0.46
RHOT1-207ENST00000580392 RB1CC1Q8TDY2 1594 aa17.76■□□□□ 0.43
RHOT1-207ENST00000580392 SHROOM4Q9ULL8 1493 aa17.62■□□□□ 0.41
RHOT1-207ENST00000580392 SCRIBQ14160 1630 aa17.47■□□□□ 0.39
RHOT1-207ENST00000580392 UNC13AQ9UPW8 1703 aa17.18■□□□□ 0.34
RHOT1-207ENST00000580392 BICRAQ9NZM4 1560 aa17.13■□□□□ 0.33
RHOT1-207ENST00000580392 PABPN1Q86U42 306 aaKnown RBP eCLIP17■□□□□ 0.31
RHOT1-207ENST00000580392 SUPT5HO00267 1087 aaKnown RBP16.99■□□□□ 0.31
RHOT1-207ENST00000580392 BAZ1AQ9NRL2 1556 aaPredicted RBP16.98■□□□□ 0.31
RHOT1-207ENST00000580392 RSF1Q96T23 1441 aaPredicted RBP16.98■□□□□ 0.31
RHOT1-207ENST00000580392 CECR2Q9BXF3 1484 aa16.95■□□□□ 0.3
RHOT1-207ENST00000580392 MROH2BQ7Z745 1585 aa16.87■□□□□ 0.29
RHOT1-207ENST00000580392 SMARCA4P51532 1647 aa16.84■□□□□ 0.29
RHOT1-207ENST00000580392 PEG3Q9GZU2 1588 aa16.74■□□□□ 0.27
RHOT1-207ENST00000580392 WIZO95785 1651 aa16.67■□□□□ 0.26
RHOT1-207ENST00000580392 SMARCA2P51531 1590 aa16.67■□□□□ 0.26
RHOT1-207ENST00000580392 EIF4G1Q04637 1599 aaKnown RBP16.65■□□□□ 0.26
RHOT1-207ENST00000580392 ATAD2BQ9ULI0 1458 aa16.63■□□□□ 0.25
RHOT1-207ENST00000580392 TOP2AP11388 1531 aaKnown RBP16.62■□□□□ 0.25
RHOT1-207ENST00000580392 NCAPD3P42695 1498 aa16.57■□□□□ 0.24
RHOT1-207ENST00000580392 BAZ1BQ9UIG0 1483 aaKnown RBP16.52■□□□□ 0.23
RHOT1-207ENST00000580392 HMGXB3Q12766 1538 aa16.51■□□□□ 0.23
RHOT1-207ENST00000580392 CCDC88BA6NC98 1476 aa16.42■□□□□ 0.22
RHOT1-207ENST00000580392 CC2D2AQ9P2K1 1620 aa16.37■□□□□ 0.21
RHOT1-207ENST00000580392 CHIC1Q5VXU3 224 aa16.32■□□□□ 0.2
RHOT1-207ENST00000580392 AEBP2Q6ZN18 517 aaPredicted RBP16.18■□□□□ 0.18
RHOT1-207ENST00000580392 CFTRP13569 1480 aa16.15■□□□□ 0.18
RHOT1-207ENST00000580392 CADPSQ9ULU8 1353 aa16.12■□□□□ 0.17
RHOT1-207ENST00000580392 TRIM41Q8WV44 630 aa16.11■□□□□ 0.17
RHOT1-207ENST00000580392 WRNQ14191 1432 aaPredicted RBP eCLIP16■□□□□ 0.15
RHOT1-207ENST00000580392 LAMC3Q9Y6N6 1575 aa15.98■□□□□ 0.15
RHOT1-207ENST00000580392 DNAJC5BQ9UF47 199 aa15.96■□□□□ 0.15
RHOT1-207ENST00000580392 PRDM2Q13029 1718 aa15.94■□□□□ 0.14
RHOT1-207ENST00000580392 ABCC8Q09428 1581 aa15.93■□□□□ 0.14
RHOT1-207ENST00000580392 PDS5BQ9NTI5 1447 aa15.9■□□□□ 0.14
RHOT1-207ENST00000580392 FANCD2Q9BXW9 1451 aa15.87■□□□□ 0.13
RHOT1-207ENST00000580392 TOP2BQ02880 1626 aa15.86■□□□□ 0.13
RHOT1-207ENST00000580392 EEA1Q15075 1411 aa15.86■□□□□ 0.13
RHOT1-207ENST00000580392 SYNJ1O43426 1573 aa15.83■□□□□ 0.13
RHOT1-207ENST00000580392 BIVM-ERCC5R4GMW8 1640 aa15.83■□□□□ 0.13
RHOT1-207ENST00000580392 NESP48681 1621 aa15.8■□□□□ 0.12
RHOT1-207ENST00000580392 CUX1P39880 1505 aa15.79■□□□□ 0.12
RHOT1-207ENST00000580392 CEP164Q9UPV0 1460 aa15.79■□□□□ 0.12
RHOT1-207ENST00000580392 DNMBPQ6XZF7 1577 aa15.73■□□□□ 0.11
RHOT1-207ENST00000580392 SOGA1O94964 1423 aa15.68■□□□□ 0.1
RHOT1-207ENST00000580392 TOPBP1Q92547 1522 aa15.68■□□□□ 0.1
RHOT1-207ENST00000580392 CSRNP3Q8WYN3 585 aa15.68■□□□□ 0.1
RHOT1-207ENST00000580392 KIF27Q86VH2 1401 aa15.65■□□□□ 0.1
RHOT1-207ENST00000580392 FGD5Q6ZNL6 1462 aa15.64■□□□□ 0.09
RHOT1-207ENST00000580392 FAM9AQ8IZU1 332 aaPredicted RBP15.63■□□□□ 0.09
RHOT1-207ENST00000580392 MRC2Q9UBG0 1479 aa15.63■□□□□ 0.09
RHOT1-207ENST00000580392 URB2Q14146 1524 aaKnown RBP15.63■□□□□ 0.09
RHOT1-207ENST00000580392 KIF21AQ7Z4S6 1674 aa15.6■□□□□ 0.09
RHOT1-207ENST00000580392 POLA1P09884 1462 aaPredicted RBP15.59■□□□□ 0.09
RHOT1-207ENST00000580392 ABCA10Q8WWZ4 1543 aa15.58■□□□□ 0.09
RHOT1-207ENST00000580392 LOC105371045A0A1W2PR82 267 aa15.58■□□□□ 0.08
RHOT1-207ENST00000580392 RUSC2Q8N2Y8 1516 aa15.58■□□□□ 0.08
RHOT1-207ENST00000580392 ERCC6Q03468 1493 aa15.57■□□□□ 0.08
RHOT1-207ENST00000580392 WDR62O43379 1518 aa15.55■□□□□ 0.08
RHOT1-207ENST00000580392 CUX2O14529 1486 aa15.53■□□□□ 0.08
RHOT1-207ENST00000580392 KIF21BO75037 1637 aa15.53■□□□□ 0.08
RHOT1-207ENST00000580392 GOLGA3Q08378 1498 aa15.52■□□□□ 0.08
RHOT1-207ENST00000580392 PRXQ9BXM0 1461 aa15.51■□□□□ 0.07
RHOT1-207ENST00000580392 TNIKQ9UKE5 1360 aa15.49■□□□□ 0.07
RHOT1-207ENST00000580392 ERICH3Q5RHP9 1530 aa15.49■□□□□ 0.07
RHOT1-207ENST00000580392 IGF1RP08069 1367 aa15.49■□□□□ 0.07
RHOT1-207ENST00000580392 IFT140Q96RY7 1462 aa15.47■□□□□ 0.07
RHOT1-207ENST00000580392 RAD54L2Q9Y4B4 1467 aa15.47■□□□□ 0.07
RHOT1-207ENST00000580392 WDR97A6NE52 1622 aa15.46■□□□□ 0.07
RHOT1-207ENST00000580392 THOC2Q8NI27 1593 aaKnown RBP15.45■□□□□ 0.06
RHOT1-207ENST00000580392 TARBP1Q13395 1621 aaKnown RBP15.44■□□□□ 0.06
RHOT1-207ENST00000580392 GAPVD1Q14C86 1478 aa15.4■□□□□ 0.06
RHOT1-207ENST00000580392 CARMIL1Q5VZK9 1371 aa15.4■□□□□ 0.06
RHOT1-207ENST00000580392 UBTFP17480 764 aaKnown RBP15.4■□□□□ 0.06
RHOT1-207ENST00000580392 ABCA5Q8WWZ7 1642 aa15.39■□□□□ 0.05
RHOT1-207ENST00000580392 RAPGEF2Q9Y4G8 1499 aa15.39■□□□□ 0.05
RHOT1-207ENST00000580392 CUL7Q14999 1698 aa15.37■□□□□ 0.05
RHOT1-207ENST00000580392 TDRD9Q8NDG6 1382 aaKnown RBP15.36■□□□□ 0.05
RHOT1-207ENST00000580392 CEP162Q5TB80 1403 aa15.33■□□□□ 0.04
RHOT1-207ENST00000580392 GRIN2BQ13224 1484 aa15.33■□□□□ 0.04
RHOT1-207ENST00000580392 EHMT2Q96KQ7 1210 aa15.29■□□□□ 0.04
RHOT1-207ENST00000580392 FHAD1B1AJZ9 1412 aa15.28■□□□□ 0.04
RHOT1-207ENST00000580392 AQRO60306 1485 aaKnown RBP eCLIP15.27■□□□□ 0.037e-7■■□□□ 14.1
RHOT1-207ENST00000580392 CLIP1P30622 1438 aa15.25■□□□□ 0.03
RHOT1-207ENST00000580392 ZNF608Q9ULD9 1512 aaPredicted RBP15.24■□□□□ 0.03
RHOT1-207ENST00000580392 MAGI1Q96QZ7 1491 aaPredicted RBP15.23■□□□□ 0.03
RHOT1-207ENST00000580392 PBRM1Q86U86 1689 aa15.21■□□□□ 0.03
RHOT1-207ENST00000580392 EIF4G3O43432 1585 aaKnown RBP15.2■□□□□ 0.02
RHOT1-207ENST00000580392 ADAMTS12P58397 1594 aa15.19■□□□□ 0.02
RHOT1-207ENST00000580392 SNAPC4Q5SXM2 1469 aa15.14■□□□□ 0.01
RHOT1-207ENST00000580392 SYNJ2O15056 1496 aa15.14■□□□□ 0.01
RHOT1-207ENST00000580392 VPS8Q8N3P4 1428 aa15.13■□□□□ 0.01
RHOT1-207ENST00000580392 EFCAB5A4FU69 1503 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms