RNA–Protein interactions for RNA: ENST00000580219.5

SNX11-206, Transcript of sorting nexin 11, humanhuman

TSL 2 BASIC

Gene SNX11, Length 1,200 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-206ENST00000580219 AEBP2Q6ZN18 517 aaPredicted RBP24.93■■□□□ 1.58
SNX11-206ENST00000580219 CHIC1Q5VXU3 224 aa24.01■■□□□ 1.43
SNX11-206ENST00000580219 NISCHQ9Y2I1 1504 aa22.27■■□□□ 1.16
SNX11-206ENST00000580219 ABCC9O60706 1549 aa21.82■■□□□ 1.08
SNX11-206ENST00000580219 DNAJC5BQ9UF47 199 aa21.59■■□□□ 1.05
SNX11-206ENST00000580219 PHF23Q9BUL5 403 aaPredicted RBP21.15■□□□□ 0.98
SNX11-206ENST00000580219 SENP3Q9H4L4 574 aaPredicted RBP21.1■□□□□ 0.97
SNX11-206ENST00000580219 DNAJC5Q9H3Z4 198 aa20.76■□□□□ 0.91
SNX11-206ENST00000580219 CCDC180Q9P1Z9 1646 aa20.58■□□□□ 0.89
SNX11-206ENST00000580219 RB1CC1Q8TDY2 1594 aa20.19■□□□□ 0.82
SNX11-206ENST00000580219 PABPN1Q86U42 306 aaKnown RBP eCLIP20.06■□□□□ 0.8
SNX11-206ENST00000580219 UNC13AQ9UPW8 1703 aa19.88■□□□□ 0.77
SNX11-206ENST00000580219 CECR2Q9BXF3 1484 aa19.78■□□□□ 0.76
SNX11-206ENST00000580219 NACADO15069 1562 aa19.7■□□□□ 0.74
SNX11-206ENST00000580219 FOXD1Q16676 465 aa19.69■□□□□ 0.74
SNX11-206ENST00000580219 CC2D2AQ9P2K1 1620 aa19.69■□□□□ 0.74
SNX11-206ENST00000580219 BICRAQ9NZM4 1560 aa19.67■□□□□ 0.74
SNX11-206ENST00000580219 TRIM41Q8WV44 630 aa19.37■□□□□ 0.69
SNX11-206ENST00000580219 CUX2O14529 1486 aa19.33■□□□□ 0.68
SNX11-206ENST00000580219 PLPPR3Q6T4P5 718 aa19.32■□□□□ 0.68
SNX11-206ENST00000580219 EIF4G1Q04637 1599 aaKnown RBP19.3■□□□□ 0.68
SNX11-206ENST00000580219 DCAF8L2P0C7V8 631 aa19.28■□□□□ 0.68
SNX11-206ENST00000580219 SHROOM4Q9ULL8 1493 aa19.2■□□□□ 0.66
SNX11-206ENST00000580219 MYO15BQ96JP2 1530 aa18.95■□□□□ 0.62
SNX11-206ENST00000580219 ERCC6Q03468 1493 aa18.93■□□□□ 0.62
SNX11-206ENST00000580219 PPP6R1Q9UPN7 881 aa18.77■□□□□ 0.6
SNX11-206ENST00000580219 ADRA2BP18089 450 aa18.69■□□□□ 0.58
SNX11-206ENST00000580219 SCRIBQ14160 1630 aa18.68■□□□□ 0.58
SNX11-206ENST00000580219 ZCCHC6Q5VYS8 1495 aaKnown RBP18.65■□□□□ 0.58
SNX11-206ENST00000580219 THOC2Q8NI27 1593 aaKnown RBP18.51■□□□□ 0.55
SNX11-206ENST00000580219 DCAF1Q9Y4B6 1507 aa18.45■□□□□ 0.54
SNX11-206ENST00000580219 PIAS4Q8N2W9 510 aaPredicted RBP18.43■□□□□ 0.54
SNX11-206ENST00000580219 NESP48681 1621 aa18.38■□□□□ 0.53
SNX11-206ENST00000580219 BAZ1AQ9NRL2 1556 aaPredicted RBP18.3■□□□□ 0.52
SNX11-206ENST00000580219 SMARCA2P51531 1590 aa18.27■□□□□ 0.52
SNX11-206ENST00000580219 RIMBP3CA6NJZ7 1639 aa18.22■□□□□ 0.51
SNX11-206ENST00000580219 RIMBP3BA6NNM3 1639 aa18.22■□□□□ 0.51
SNX11-206ENST00000580219 RIMBP3Q9UFD9 1639 aa18.22■□□□□ 0.51
SNX11-206ENST00000580219 KIF21AQ7Z4S6 1674 aa18.2■□□□□ 0.5
SNX11-206ENST00000580219 MSH5O43196 834 aa18.2■□□□□ 0.5
SNX11-206ENST00000580219 NCAPD3P42695 1498 aa18.16■□□□□ 0.5
SNX11-206ENST00000580219 OSCARQ8IYS5 282 aa18.15■□□□□ 0.5
SNX11-206ENST00000580219 TRHP20396 242 aaPredicted RBP18.1■□□□□ 0.49
SNX11-206ENST00000580219 ILDR1Q86SU0 546 aaPredicted RBP18.04■□□□□ 0.48
SNX11-206ENST00000580219 LAMC3Q9Y6N6 1575 aa18.04■□□□□ 0.48
SNX11-206ENST00000580219 ARHGEF11O15085 1522 aa17.98■□□□□ 0.47
SNX11-206ENST00000580219 HMGXB3Q12766 1538 aa17.97■□□□□ 0.47
SNX11-206ENST00000580219 ATAD2BQ9ULI0 1458 aa17.95■□□□□ 0.46
SNX11-206ENST00000580219 PDS5BQ9NTI5 1447 aa17.91■□□□□ 0.46
SNX11-206ENST00000580219 WDR62O43379 1518 aa17.9■□□□□ 0.46
SNX11-206ENST00000580219 MRC2Q9UBG0 1479 aa17.88■□□□□ 0.45
SNX11-206ENST00000580219 CYB5RLQ6IPT4 315 aa17.85■□□□□ 0.45
SNX11-206ENST00000580219 BAZ1BQ9UIG0 1483 aaKnown RBP17.73■□□□□ 0.43
SNX11-206ENST00000580219 ARAP1Q96P48 1450 aa17.7■□□□□ 0.42
SNX11-206ENST00000580219 SMARCA4P51532 1647 aa17.66■□□□□ 0.42
SNX11-206ENST00000580219 CEP164Q9UPV0 1460 aa17.55■□□□□ 0.4
SNX11-206ENST00000580219 CADPSQ9ULU8 1353 aa17.53■□□□□ 0.4
SNX11-206ENST00000580219 PEG3Q9GZU2 1588 aa17.46■□□□□ 0.39
SNX11-206ENST00000580219 CHD1O14646 1710 aa17.43■□□□□ 0.38
SNX11-206ENST00000580219 RSF1Q96T23 1441 aaPredicted RBP17.39■□□□□ 0.38
SNX11-206ENST00000580219 FANCD2Q9BXW9 1451 aa17.39■□□□□ 0.37
SNX11-206ENST00000580219 URB2Q14146 1524 aaKnown RBP17.36■□□□□ 0.37
SNX11-206ENST00000580219 ZNF608Q9ULD9 1512 aaPredicted RBP17.36■□□□□ 0.37
SNX11-206ENST00000580219 EIF4G3O43432 1585 aaKnown RBP17.26■□□□□ 0.35
SNX11-206ENST00000580219 IFT140Q96RY7 1462 aa17.22■□□□□ 0.35
SNX11-206ENST00000580219 KDM4FA0A1W2PPD8 638 aa17.2■□□□□ 0.34
SNX11-206ENST00000580219 MROH2BQ7Z745 1585 aa17.18■□□□□ 0.34
SNX11-206ENST00000580219 SUPT5HO00267 1087 aaKnown RBP17.15■□□□□ 0.34
SNX11-206ENST00000580219 FBLN2P98095 1184 aa17.15■□□□□ 0.34
SNX11-206ENST00000580219 POTEDQ86YR6 584 aa17.14■□□□□ 0.33
SNX11-206ENST00000580219 ERCC6L2Q5T890 1561 aa17.14■□□□□ 0.33
SNX11-206ENST00000580219 CLASP1Q7Z460 1538 aa17.11■□□□□ 0.33
SNX11-206ENST00000580219 KIF13AQ9H1H9 1805 aa17.1■□□□□ 0.33
SNX11-206ENST00000580219 LMTK3Q96Q04 1460 aa17.09■□□□□ 0.33
SNX11-206ENST00000580219 CFTRP13569 1480 aa17.08■□□□□ 0.32
SNX11-206ENST00000580219 MAPK8IP2Q13387 824 aaPredicted RBP17.07■□□□□ 0.32
SNX11-206ENST00000580219 FBXO41Q8TF61 875 aa17.06■□□□□ 0.32
SNX11-206ENST00000580219 HECW2Q9P2P5 1572 aa17.04■□□□□ 0.32
SNX11-206ENST00000580219 PPP4R3CPQ6ZMV5 832 aa17.03■□□□□ 0.32
SNX11-206ENST00000580219 SCAF1Q9H7N4 1312 aaKnown RBP17.01■□□□□ 0.31
SNX11-206ENST00000580219 WIZO95785 1651 aa17.01■□□□□ 0.31
SNX11-206ENST00000580219 AQRO60306 1485 aaKnown RBP eCLIP17.01■□□□□ 0.31
SNX11-206ENST00000580219 GAPVD1Q14C86 1478 aa17■□□□□ 0.31
SNX11-206ENST00000580219 PRDM2Q13029 1718 aa16.99■□□□□ 0.31
SNX11-206ENST00000580219 SYNJ1O43426 1573 aa16.98■□□□□ 0.31
SNX11-206ENST00000580219 SOCS7O14512 581 aa16.95■□□□□ 0.3
SNX11-206ENST00000580219 TOPBP1Q92547 1522 aa16.93■□□□□ 0.3
SNX11-206ENST00000580219 TARBP1Q13395 1621 aaKnown RBP16.92■□□□□ 0.3
SNX11-206ENST00000580219 KDM6BO15054 1643 aa16.88■□□□□ 0.29
SNX11-206ENST00000580219 TOP2AP11388 1531 aaKnown RBP16.86■□□□□ 0.29
SNX11-206ENST00000580219 ILDR2Q71H61 639 aa16.85■□□□□ 0.29
SNX11-206ENST00000580219 SNAPC4Q5SXM2 1469 aa16.83■□□□□ 0.28
SNX11-206ENST00000580219 DMRT2Q9Y5R5 561 aa16.83■□□□□ 0.28
SNX11-206ENST00000580219 ADGRL1O94910 1474 aa16.8■□□□□ 0.28
SNX11-206ENST00000580219 SYNJ2O15056 1496 aa16.78■□□□□ 0.28
SNX11-206ENST00000580219 CHMP7Q8WUX9 453 aaPredicted RBP16.77■□□□□ 0.28
SNX11-206ENST00000580219 DNMBPQ6XZF7 1577 aa16.77■□□□□ 0.27
SNX11-206ENST00000580219 ABCC8Q09428 1581 aa16.75■□□□□ 0.27
SNX11-206ENST00000580219 TSPOAP1O95153 1857 aa16.71■□□□□ 0.27
SNX11-206ENST00000580219 DISP3Q9P2K9 1392 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 117.8 ms