RNA–Protein interactions for RNA: ENST00000580013.5

TSEN54-207, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 4

Gene TSEN54, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-207ENST00000580013 NISCHQ9Y2I1 1504 aa52.13■■■■■ 5.94
TSEN54-207ENST00000580013 CCDC180Q9P1Z9 1646 aa46.05■■■■■ 4.96
TSEN54-207ENST00000580013 ABCC9O60706 1549 aa44.85■■■■■ 4.77
TSEN54-207ENST00000580013 ZCCHC6Q5VYS8 1495 aaKnown RBP43.45■■■■■ 4.55
TSEN54-207ENST00000580013 DCAF8L2P0C7V8 631 aa43.4■■■■■ 4.54
TSEN54-207ENST00000580013 NACADO15069 1562 aa43.32■■■■■ 4.52
TSEN54-207ENST00000580013 MYO15BQ96JP2 1530 aa43.24■■■■■ 4.51
TSEN54-207ENST00000580013 RB1CC1Q8TDY2 1594 aa43.23■■■■■ 4.51
TSEN54-207ENST00000580013 DCAF1Q9Y4B6 1507 aa43.16■■■■■ 4.5
TSEN54-207ENST00000580013 UNC13AQ9UPW8 1703 aa42.2■■■■■ 4.35
TSEN54-207ENST00000580013 PABPN1Q86U42 306 aaKnown RBP eCLIP42.07■■■■■ 4.33
TSEN54-207ENST00000580013 SCRIBQ14160 1630 aa42.04■■■■■ 4.32
TSEN54-207ENST00000580013 BICRAQ9NZM4 1560 aa42.02■■■■■ 4.32
TSEN54-207ENST00000580013 SHROOM4Q9ULL8 1493 aa41.53■■■■■ 4.24
TSEN54-207ENST00000580013 DNAJC5BQ9UF47 199 aa41.13■■■■■ 4.17
TSEN54-207ENST00000580013 EIF4G1Q04637 1599 aaKnown RBP40.82■■■■■ 4.12
TSEN54-207ENST00000580013 CECR2Q9BXF3 1484 aa40.62■■■■■ 4.09
TSEN54-207ENST00000580013 CC2D2AQ9P2K1 1620 aa40.56■■■■■ 4.08
TSEN54-207ENST00000580013 BAZ1AQ9NRL2 1556 aaPredicted RBP40.3■■■■■ 4.04
TSEN54-207ENST00000580013 SMARCA4P51532 1647 aa40.29■■■■■ 4.04
TSEN54-207ENST00000580013 MROH2BQ7Z745 1585 aa40.18■■■■■ 4.02
TSEN54-207ENST00000580013 ATAD2BQ9ULI0 1458 aa40.1■■■■■ 4.01
TSEN54-207ENST00000580013 NCAPD3P42695 1498 aa40.07■■■■■ 4.01
TSEN54-207ENST00000580013 SMARCA2P51531 1590 aa39.97■■■■□ 3.99
TSEN54-207ENST00000580013 PEG3Q9GZU2 1588 aa39.97■■■■□ 3.99
TSEN54-207ENST00000580013 RSF1Q96T23 1441 aaPredicted RBP39.89■■■■□ 3.98
TSEN54-207ENST00000580013 HMGXB3Q12766 1538 aa39.77■■■■□ 3.96
TSEN54-207ENST00000580013 BAZ1BQ9UIG0 1483 aaKnown RBP39.68■■■■□ 3.94
TSEN54-207ENST00000580013 WIZO95785 1651 aa39.68■■■■□ 3.94
TSEN54-207ENST00000580013 TOP2AP11388 1531 aaKnown RBP39.29■■■■□ 3.88
TSEN54-207ENST00000580013 SUPT5HO00267 1087 aaKnown RBP39.05■■■■□ 3.84
TSEN54-207ENST00000580013 NESP48681 1621 aa38.94■■■■□ 3.82
TSEN54-207ENST00000580013 CCDC88BA6NC98 1476 aa38.92■■■■□ 3.82
TSEN54-207ENST00000580013 CADPSQ9ULU8 1353 aa38.92■■■■□ 3.82
TSEN54-207ENST00000580013 LAMC3Q9Y6N6 1575 aa38.82■■■■□ 3.81
TSEN54-207ENST00000580013 CFTRP13569 1480 aa38.73■■■■□ 3.79
TSEN54-207ENST00000580013 PDS5BQ9NTI5 1447 aa38.62■■■■□ 3.77
TSEN54-207ENST00000580013 ERCC6Q03468 1493 aa38.55■■■■□ 3.76
TSEN54-207ENST00000580013 FANCD2Q9BXW9 1451 aa38.38■■■■□ 3.73
TSEN54-207ENST00000580013 KIF21AQ7Z4S6 1674 aa38.35■■■■□ 3.73
TSEN54-207ENST00000580013 CEP164Q9UPV0 1460 aa38.25■■■■□ 3.71
TSEN54-207ENST00000580013 PRDM2Q13029 1718 aa38.21■■■■□ 3.71
TSEN54-207ENST00000580013 THOC2Q8NI27 1593 aaKnown RBP38.2■■■■□ 3.71
TSEN54-207ENST00000580013 MRC2Q9UBG0 1479 aa38.16■■■■□ 3.7
TSEN54-207ENST00000580013 CUX2O14529 1486 aa38.11■■■■□ 3.69
TSEN54-207ENST00000580013 WDR62O43379 1518 aa38.02■■■■□ 3.68
TSEN54-207ENST00000580013 URB2Q14146 1524 aaKnown RBP38.01■■■■□ 3.67
TSEN54-207ENST00000580013 ABCC8Q09428 1581 aa37.82■■■■□ 3.65
TSEN54-207ENST00000580013 TOPBP1Q92547 1522 aa37.82■■■■□ 3.64
TSEN54-207ENST00000580013 DNMBPQ6XZF7 1577 aa37.74■■■■□ 3.63
TSEN54-207ENST00000580013 CUX1P39880 1505 aa37.66■■■■□ 3.62
TSEN54-207ENST00000580013 WRNQ14191 1432 aaPredicted RBP eCLIP37.52■■■■□ 3.6
TSEN54-207ENST00000580013 POLA1P09884 1462 aaPredicted RBP37.52■■■■□ 3.6
TSEN54-207ENST00000580013 IFT140Q96RY7 1462 aa37.49■■■■□ 3.59
TSEN54-207ENST00000580013 FGD5Q6ZNL6 1462 aa37.45■■■■□ 3.59
TSEN54-207ENST00000580013 SOGA1O94964 1423 aa37.41■■■■□ 3.58
TSEN54-207ENST00000580013 RAD54L2Q9Y4B4 1467 aa37.38■■■■□ 3.57
TSEN54-207ENST00000580013 SYNJ1O43426 1573 aa37.37■■■■□ 3.57
TSEN54-207ENST00000580013 TOP2BQ02880 1626 aa37.36■■■■□ 3.57
TSEN54-207ENST00000580013 TARBP1Q13395 1621 aaKnown RBP37.36■■■■□ 3.57
TSEN54-207ENST00000580013 ZNF608Q9ULD9 1512 aaPredicted RBP37.33■■■■□ 3.57
TSEN54-207ENST00000580013 BIVM-ERCC5R4GMW8 1640 aa37.32■■■■□ 3.57
TSEN54-207ENST00000580013 AQRO60306 1485 aaKnown RBP eCLIP37.19■■■■□ 3.542e-6■■■■■ 30.4
TSEN54-207ENST00000580013 TDRD9Q8NDG6 1382 aaKnown RBP37.17■■■■□ 3.54
TSEN54-207ENST00000580013 ABCA10Q8WWZ4 1543 aa37.14■■■■□ 3.54
TSEN54-207ENST00000580013 EIF4G3O43432 1585 aaKnown RBP37.06■■■■□ 3.52
TSEN54-207ENST00000580013 WDR97A6NE52 1622 aa37.03■■■■□ 3.52
TSEN54-207ENST00000580013 GAPVD1Q14C86 1478 aa36.94■■■■□ 3.5
TSEN54-207ENST00000580013 ABCA5Q8WWZ7 1642 aa36.88■■■■□ 3.5
TSEN54-207ENST00000580013 GRIN2BQ13224 1484 aa36.88■■■■□ 3.5
TSEN54-207ENST00000580013 TRIM41Q8WV44 630 aa36.88■■■■□ 3.49
TSEN54-207ENST00000580013 SNAPC4Q5SXM2 1469 aa36.76■■■■□ 3.48
TSEN54-207ENST00000580013 DNAJC5Q9H3Z4 198 aa36.75■■■■□ 3.47
TSEN54-207ENST00000580013 CHIC1Q5VXU3 224 aa36.74■■■■□ 3.47
TSEN54-207ENST00000580013 MAGI1Q96QZ7 1491 aaPredicted RBP36.74■■■■□ 3.47
TSEN54-207ENST00000580013 KIF27Q86VH2 1401 aa36.7■■■■□ 3.47
TSEN54-207ENST00000580013 OSCARQ8IYS5 282 aa36.7■■■■□ 3.47
TSEN54-207ENST00000580013 PBRM1Q86U86 1689 aa36.67■■■■□ 3.46
TSEN54-207ENST00000580013 IGF1RP08069 1367 aa36.66■■■■□ 3.46
TSEN54-207ENST00000580013 ERICH3Q5RHP9 1530 aa36.66■■■■□ 3.46
TSEN54-207ENST00000580013 CHMP7Q8WUX9 453 aaPredicted RBP36.61■■■■□ 3.45
TSEN54-207ENST00000580013 FBLN2P98095 1184 aa36.6■■■■□ 3.45
TSEN54-207ENST00000580013 SYNJ2O15056 1496 aa36.6■■■■□ 3.45
TSEN54-207ENST00000580013 RUSC2Q8N2Y8 1516 aa36.54■■■■□ 3.44
TSEN54-207ENST00000580013 FHAD1B1AJZ9 1412 aa36.54■■■■□ 3.44
TSEN54-207ENST00000580013 CHD1O14646 1710 aa36.5■■■■□ 3.43
TSEN54-207ENST00000580013 ADAMTS12P58397 1594 aa36.49■■■■□ 3.43
TSEN54-207ENST00000580013 GRIN2AQ12879 1464 aa36.39■■■■□ 3.42
TSEN54-207ENST00000580013 CARMIL1Q5VZK9 1371 aa36.38■■■■□ 3.41
TSEN54-207ENST00000580013 NUP160Q12769 1436 aa36.29■■■■□ 3.4
TSEN54-207ENST00000580013 CUL7Q14999 1698 aa36.29■■■■□ 3.4
TSEN54-207ENST00000580013 CLASP1Q7Z460 1538 aa36.24■■■■□ 3.39
TSEN54-207ENST00000580013 CSRNP3Q8WYN3 585 aa36.23■■■■□ 3.39
TSEN54-207ENST00000580013 EEA1Q15075 1411 aa36.2■■■■□ 3.39
TSEN54-207ENST00000580013 CEP170Q5SW79 1584 aa36.19■■■■□ 3.38
TSEN54-207ENST00000580013 PRXQ9BXM0 1461 aa36.16■■■■□ 3.38
TSEN54-207ENST00000580013 RAPGEF2Q9Y4G8 1499 aa36.13■■■■□ 3.37
TSEN54-207ENST00000580013 FAM9AQ8IZU1 332 aaPredicted RBP36.07■■■■□ 3.36
TSEN54-207ENST00000580013 KIAA0586Q9BVV6 1533 aa36■■■■□ 3.35
TSEN54-207ENST00000580013 JPH4Q96JJ6 628 aa35.99■■■■□ 3.35
Retrieved 100 of 20,778 RNA–protein pairs in 139.5 ms