RNA–Protein interactions for RNA: ENST00000579920.2

RN7SL835P-201, Transcript of RNA, 7SL, cytoplasmic 835, pseudogene, humanhuman

BASIC

Gene RN7SL835P, Length 262 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL835P-201ENST00000579920 NISCHQ9Y2I1 1504 aa17.85■□□□□ 0.45
RN7SL835P-201ENST00000579920 CCDC180Q9P1Z9 1646 aa15.83■□□□□ 0.13
RN7SL835P-201ENST00000579920 ABCC9O60706 1549 aa15.26■□□□□ 0.03
RN7SL835P-201ENST00000579920 ZCCHC6Q5VYS8 1495 aaKnown RBP14.91□□□□□ -0.02
RN7SL835P-201ENST00000579920 MYO15BQ96JP2 1530 aa14.84□□□□□ -0.03
RN7SL835P-201ENST00000579920 NACADO15069 1562 aa14.84□□□□□ -0.03
RN7SL835P-201ENST00000579920 DCAF1Q9Y4B6 1507 aa14.82□□□□□ -0.04
RN7SL835P-201ENST00000579920 RB1CC1Q8TDY2 1594 aa14.81□□□□□ -0.04
RN7SL835P-201ENST00000579920 DCAF8L2P0C7V8 631 aa14.74□□□□□ -0.05
RN7SL835P-201ENST00000579920 UNC13AQ9UPW8 1703 aa14.44□□□□□ -0.1
RN7SL835P-201ENST00000579920 SCRIBQ14160 1630 aa14.4□□□□□ -0.1
RN7SL835P-201ENST00000579920 BICRAQ9NZM4 1560 aa14.34□□□□□ -0.11
RN7SL835P-201ENST00000579920 SHROOM4Q9ULL8 1493 aa14.28□□□□□ -0.12
RN7SL835P-201ENST00000579920 PABPN1Q86U42 306 aaKnown RBP eCLIP14.25□□□□□ -0.13
RN7SL835P-201ENST00000579920 EIF4G1Q04637 1599 aaKnown RBP13.95□□□□□ -0.18
RN7SL835P-201ENST00000579920 CECR2Q9BXF3 1484 aa13.85□□□□□ -0.19
RN7SL835P-201ENST00000579920 BAZ1AQ9NRL2 1556 aaPredicted RBP13.84□□□□□ -0.19
RN7SL835P-201ENST00000579920 CC2D2AQ9P2K1 1620 aa13.84□□□□□ -0.19
RN7SL835P-201ENST00000579920 DNAJC5BQ9UF47 199 aa13.84□□□□□ -0.19
RN7SL835P-201ENST00000579920 SMARCA4P51532 1647 aa13.82□□□□□ -0.2
RN7SL835P-201ENST00000579920 MROH2BQ7Z745 1585 aa13.73□□□□□ -0.21
RN7SL835P-201ENST00000579920 PEG3Q9GZU2 1588 aa13.72□□□□□ -0.21
RN7SL835P-201ENST00000579920 SMARCA2P51531 1590 aa13.71□□□□□ -0.22
RN7SL835P-201ENST00000579920 ATAD2BQ9ULI0 1458 aa13.69□□□□□ -0.22
RN7SL835P-201ENST00000579920 NCAPD3P42695 1498 aa13.68□□□□□ -0.22
RN7SL835P-201ENST00000579920 HMGXB3Q12766 1538 aa13.64□□□□□ -0.23
RN7SL835P-201ENST00000579920 RSF1Q96T23 1441 aaPredicted RBP13.64□□□□□ -0.23
RN7SL835P-201ENST00000579920 BAZ1BQ9UIG0 1483 aaKnown RBP13.59□□□□□ -0.23
RN7SL835P-201ENST00000579920 WIZO95785 1651 aa13.59□□□□□ -0.23
RN7SL835P-201ENST00000579920 TOP2AP11388 1531 aaKnown RBP13.49□□□□□ -0.25
RN7SL835P-201ENST00000579920 SUPT5HO00267 1087 aaKnown RBP13.34□□□□□ -0.27
RN7SL835P-201ENST00000579920 CCDC88BA6NC98 1476 aa13.3□□□□□ -0.28
RN7SL835P-201ENST00000579920 LAMC3Q9Y6N6 1575 aa13.3□□□□□ -0.28
RN7SL835P-201ENST00000579920 CADPSQ9ULU8 1353 aa13.27□□□□□ -0.29
RN7SL835P-201ENST00000579920 NESP48681 1621 aa13.25□□□□□ -0.29
RN7SL835P-201ENST00000579920 CFTRP13569 1480 aa13.24□□□□□ -0.29
RN7SL835P-201ENST00000579920 PDS5BQ9NTI5 1447 aa13.2□□□□□ -0.3
RN7SL835P-201ENST00000579920 PRDM2Q13029 1718 aa13.16□□□□□ -0.3
RN7SL835P-201ENST00000579920 ERCC6Q03468 1493 aa13.16□□□□□ -0.3
RN7SL835P-201ENST00000579920 KIF21AQ7Z4S6 1674 aa13.12□□□□□ -0.31
RN7SL835P-201ENST00000579920 FANCD2Q9BXW9 1451 aa13.11□□□□□ -0.31
RN7SL835P-201ENST00000579920 CEP164Q9UPV0 1460 aa13.1□□□□□ -0.31
RN7SL835P-201ENST00000579920 THOC2Q8NI27 1593 aaKnown RBP13.07□□□□□ -0.32
RN7SL835P-201ENST00000579920 MRC2Q9UBG0 1479 aa13.04□□□□□ -0.32
RN7SL835P-201ENST00000579920 WDR62O43379 1518 aa13.01□□□□□ -0.33
RN7SL835P-201ENST00000579920 CUX2O14529 1486 aa13□□□□□ -0.33
RN7SL835P-201ENST00000579920 ABCC8Q09428 1581 aa12.97□□□□□ -0.33
RN7SL835P-201ENST00000579920 URB2Q14146 1524 aaKnown RBP12.97□□□□□ -0.33
RN7SL835P-201ENST00000579920 DNMBPQ6XZF7 1577 aa12.94□□□□□ -0.34
RN7SL835P-201ENST00000579920 TOPBP1Q92547 1522 aa12.93□□□□□ -0.34
RN7SL835P-201ENST00000579920 CUX1P39880 1505 aa12.88□□□□□ -0.35
RN7SL835P-201ENST00000579920 WRNQ14191 1432 aaPredicted RBP eCLIP12.87□□□□□ -0.35
RN7SL835P-201ENST00000579920 TOP2BQ02880 1626 aa12.84□□□□□ -0.35
RN7SL835P-201ENST00000579920 BIVM-ERCC5R4GMW8 1640 aa12.84□□□□□ -0.35
RN7SL835P-201ENST00000579920 POLA1P09884 1462 aaPredicted RBP12.83□□□□□ -0.36
RN7SL835P-201ENST00000579920 IFT140Q96RY7 1462 aa12.82□□□□□ -0.36
RN7SL835P-201ENST00000579920 SYNJ1O43426 1573 aa12.81□□□□□ -0.36
RN7SL835P-201ENST00000579920 FGD5Q6ZNL6 1462 aa12.81□□□□□ -0.36
RN7SL835P-201ENST00000579920 TARBP1Q13395 1621 aaKnown RBP12.78□□□□□ -0.36
RN7SL835P-201ENST00000579920 SOGA1O94964 1423 aa12.77□□□□□ -0.37
RN7SL835P-201ENST00000579920 WDR97A6NE52 1622 aa12.74□□□□□ -0.37
RN7SL835P-201ENST00000579920 RAD54L2Q9Y4B4 1467 aa12.74□□□□□ -0.37
RN7SL835P-201ENST00000579920 ABCA10Q8WWZ4 1543 aa12.72□□□□□ -0.37
RN7SL835P-201ENST00000579920 ZNF608Q9ULD9 1512 aaPredicted RBP12.71□□□□□ -0.38
RN7SL835P-201ENST00000579920 EIF4G3O43432 1585 aaKnown RBP12.7□□□□□ -0.38
RN7SL835P-201ENST00000579920 ABCA5Q8WWZ7 1642 aa12.66□□□□□ -0.38
RN7SL835P-201ENST00000579920 TDRD9Q8NDG6 1382 aaKnown RBP12.66□□□□□ -0.38
RN7SL835P-201ENST00000579920 AQRO60306 1485 aaKnown RBP eCLIP12.65□□□□□ -0.38
RN7SL835P-201ENST00000579920 TRIM41Q8WV44 630 aa12.63□□□□□ -0.39
RN7SL835P-201ENST00000579920 GAPVD1Q14C86 1478 aa12.63□□□□□ -0.39
RN7SL835P-201ENST00000579920 GRIN2BQ13224 1484 aa12.62□□□□□ -0.39
RN7SL835P-201ENST00000579920 PBRM1Q86U86 1689 aa12.6□□□□□ -0.39
RN7SL835P-201ENST00000579920 KIF27Q86VH2 1401 aa12.59□□□□□ -0.39
RN7SL835P-201ENST00000579920 MAGI1Q96QZ7 1491 aaPredicted RBP12.59□□□□□ -0.39
RN7SL835P-201ENST00000579920 ERICH3Q5RHP9 1530 aa12.58□□□□□ -0.4
RN7SL835P-201ENST00000579920 CHIC1Q5VXU3 224 aa12.57□□□□□ -0.4
RN7SL835P-201ENST00000579920 SNAPC4Q5SXM2 1469 aa12.56□□□□□ -0.4
RN7SL835P-201ENST00000579920 SYNJ2O15056 1496 aa12.53□□□□□ -0.4
RN7SL835P-201ENST00000579920 ADAMTS12P58397 1594 aa12.52□□□□□ -0.41
RN7SL835P-201ENST00000579920 CUL7Q14999 1698 aa12.51□□□□□ -0.41
RN7SL835P-201ENST00000579920 IGF1RP08069 1367 aa12.5□□□□□ -0.41
RN7SL835P-201ENST00000579920 FHAD1B1AJZ9 1412 aa12.5□□□□□ -0.41
RN7SL835P-201ENST00000579920 CHD1O14646 1710 aa12.49□□□□□ -0.41
RN7SL835P-201ENST00000579920 EEA1Q15075 1411 aa12.48□□□□□ -0.41
RN7SL835P-201ENST00000579920 RUSC2Q8N2Y8 1516 aa12.47□□□□□ -0.41
RN7SL835P-201ENST00000579920 CHMP7Q8WUX9 453 aaPredicted RBP12.46□□□□□ -0.41
RN7SL835P-201ENST00000579920 GRIN2AQ12879 1464 aa12.46□□□□□ -0.42
RN7SL835P-201ENST00000579920 OSCARQ8IYS5 282 aa12.45□□□□□ -0.42
RN7SL835P-201ENST00000579920 FBLN2P98095 1184 aa12.44□□□□□ -0.42
RN7SL835P-201ENST00000579920 CARMIL1Q5VZK9 1371 aa12.43□□□□□ -0.42
RN7SL835P-201ENST00000579920 NUP160Q12769 1436 aa12.4□□□□□ -0.42
RN7SL835P-201ENST00000579920 PRXQ9BXM0 1461 aa12.4□□□□□ -0.43
RN7SL835P-201ENST00000579920 CLASP1Q7Z460 1538 aa12.39□□□□□ -0.43
RN7SL835P-201ENST00000579920 RAPGEF2Q9Y4G8 1499 aa12.39□□□□□ -0.43
RN7SL835P-201ENST00000579920 CSRNP3Q8WYN3 585 aa12.38□□□□□ -0.43
RN7SL835P-201ENST00000579920 DNAJC5Q9H3Z4 198 aa12.38□□□□□ -0.43
RN7SL835P-201ENST00000579920 CEP170Q5SW79 1584 aa12.38□□□□□ -0.43
RN7SL835P-201ENST00000579920 KIF21BO75037 1637 aa12.33□□□□□ -0.44
RN7SL835P-201ENST00000579920 KIAA0586Q9BVV6 1533 aa12.32□□□□□ -0.44
RN7SL835P-201ENST00000579920 FAM9AQ8IZU1 332 aaPredicted RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms