RNA–Protein interactions for RNA: ENST00000579786.2

RN7SL42P-201, Transcript of RNA, 7SL, cytoplasmic 42, pseudogene, humanhuman

BASIC

Gene RN7SL42P, Length 294 nt, Biotype misc RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL42P-201ENST00000579786 NISCHQ9Y2I1 1504 aa18.66■□□□□ 0.58
RN7SL42P-201ENST00000579786 ABCC9O60706 1549 aa17.98■□□□□ 0.47
RN7SL42P-201ENST00000579786 DNAJC5BQ9UF47 199 aa17.7■□□□□ 0.42
RN7SL42P-201ENST00000579786 DNAJC5Q9H3Z4 198 aa17.01■□□□□ 0.31
RN7SL42P-201ENST00000579786 CCDC180Q9P1Z9 1646 aa16.91■□□□□ 0.3
RN7SL42P-201ENST00000579786 PABPN1Q86U42 306 aaKnown RBP eCLIP16.79■□□□□ 0.28
RN7SL42P-201ENST00000579786 RB1CC1Q8TDY2 1594 aa16.7■□□□□ 0.26
RN7SL42P-201ENST00000579786 DCAF8L2P0C7V8 631 aa16.57■□□□□ 0.24
RN7SL42P-201ENST00000579786 NACADO15069 1562 aa16.38■□□□□ 0.21
RN7SL42P-201ENST00000579786 CECR2Q9BXF3 1484 aa16.33■□□□□ 0.2
RN7SL42P-201ENST00000579786 CC2D2AQ9P2K1 1620 aa16.08■□□□□ 0.16
RN7SL42P-201ENST00000579786 BICRAQ9NZM4 1560 aa16.07■□□□□ 0.16
RN7SL42P-201ENST00000579786 TRIM41Q8WV44 630 aa15.96■□□□□ 0.15
RN7SL42P-201ENST00000579786 SHROOM4Q9ULL8 1493 aa15.94■□□□□ 0.14
RN7SL42P-201ENST00000579786 UNC13AQ9UPW8 1703 aa15.92■□□□□ 0.14
RN7SL42P-201ENST00000579786 MYO15BQ96JP2 1530 aa15.88■□□□□ 0.13
RN7SL42P-201ENST00000579786 CUX2O14529 1486 aa15.87■□□□□ 0.13
RN7SL42P-201ENST00000579786 EIF4G1Q04637 1599 aaKnown RBP15.85■□□□□ 0.13
RN7SL42P-201ENST00000579786 ERCC6Q03468 1493 aa15.7■□□□□ 0.1
RN7SL42P-201ENST00000579786 SCRIBQ14160 1630 aa15.56■□□□□ 0.08
RN7SL42P-201ENST00000579786 AEBP2Q6ZN18 517 aaPredicted RBP15.4■□□□□ 0.06
RN7SL42P-201ENST00000579786 DCAF1Q9Y4B6 1507 aa15.34■□□□□ 0.05
RN7SL42P-201ENST00000579786 OSCARQ8IYS5 282 aa15.29■□□□□ 0.04
RN7SL42P-201ENST00000579786 NCAPD3P42695 1498 aa15.22■□□□□ 0.03
RN7SL42P-201ENST00000579786 ZCCHC6Q5VYS8 1495 aaKnown RBP15.2■□□□□ 0.02
RN7SL42P-201ENST00000579786 TRHP20396 242 aaPredicted RBP15.14■□□□□ 0.01
RN7SL42P-201ENST00000579786 NESP48681 1621 aa15.14■□□□□ 0.01
RN7SL42P-201ENST00000579786 PDS5BQ9NTI5 1447 aa15.07■□□□□ 0
RN7SL42P-201ENST00000579786 ATAD2BQ9ULI0 1458 aa15.01□□□□□ -0.01
RN7SL42P-201ENST00000579786 THOC2Q8NI27 1593 aaKnown RBP14.98□□□□□ -0.01
RN7SL42P-201ENST00000579786 SMARCA2P51531 1590 aa14.95□□□□□ -0.02
RN7SL42P-201ENST00000579786 CYB5RLQ6IPT4 315 aa14.95□□□□□ -0.02
RN7SL42P-201ENST00000579786 LAMC3Q9Y6N6 1575 aa14.9□□□□□ -0.02
RN7SL42P-201ENST00000579786 HMGXB3Q12766 1538 aa14.87□□□□□ -0.03
RN7SL42P-201ENST00000579786 BAZ1BQ9UIG0 1483 aaKnown RBP14.84□□□□□ -0.03
RN7SL42P-201ENST00000579786 BAZ1AQ9NRL2 1556 aaPredicted RBP14.84□□□□□ -0.03
RN7SL42P-201ENST00000579786 MRC2Q9UBG0 1479 aa14.83□□□□□ -0.03
RN7SL42P-201ENST00000579786 CADPSQ9ULU8 1353 aa14.8□□□□□ -0.04
RN7SL42P-201ENST00000579786 RIMBP3CA6NJZ7 1639 aa14.74□□□□□ -0.05
RN7SL42P-201ENST00000579786 RIMBP3BA6NNM3 1639 aa14.74□□□□□ -0.05
RN7SL42P-201ENST00000579786 RIMBP3Q9UFD9 1639 aa14.74□□□□□ -0.05
RN7SL42P-201ENST00000579786 WDR62O43379 1518 aa14.71□□□□□ -0.06
RN7SL42P-201ENST00000579786 KIF21AQ7Z4S6 1674 aa14.7□□□□□ -0.06
RN7SL42P-201ENST00000579786 ARHGEF11O15085 1522 aa14.7□□□□□ -0.06
RN7SL42P-201ENST00000579786 ILDR1Q86SU0 546 aaPredicted RBP14.69□□□□□ -0.06
RN7SL42P-201ENST00000579786 SMARCA4P51532 1647 aa14.62□□□□□ -0.07
RN7SL42P-201ENST00000579786 CEP164Q9UPV0 1460 aa14.62□□□□□ -0.07
RN7SL42P-201ENST00000579786 FBLN2P98095 1184 aa14.56□□□□□ -0.08
RN7SL42P-201ENST00000579786 FANCD2Q9BXW9 1451 aa14.53□□□□□ -0.08
RN7SL42P-201ENST00000579786 PEG3Q9GZU2 1588 aa14.49□□□□□ -0.09
RN7SL42P-201ENST00000579786 ARAP1Q96P48 1450 aa14.48□□□□□ -0.09
RN7SL42P-201ENST00000579786 RSF1Q96T23 1441 aaPredicted RBP14.43□□□□□ -0.1
RN7SL42P-201ENST00000579786 IFT140Q96RY7 1462 aa14.39□□□□□ -0.11
RN7SL42P-201ENST00000579786 URB2Q14146 1524 aaKnown RBP14.36□□□□□ -0.11
RN7SL42P-201ENST00000579786 ZNF608Q9ULD9 1512 aaPredicted RBP14.36□□□□□ -0.11
RN7SL42P-201ENST00000579786 CFTRP13569 1480 aa14.34□□□□□ -0.11
RN7SL42P-201ENST00000579786 MROH2BQ7Z745 1585 aa14.33□□□□□ -0.12
RN7SL42P-201ENST00000579786 CHMP7Q8WUX9 453 aaPredicted RBP14.31□□□□□ -0.12
RN7SL42P-201ENST00000579786 AQRO60306 1485 aaKnown RBP eCLIP14.23□□□□□ -0.13
RN7SL42P-201ENST00000579786 KDM4FA0A1W2PPD8 638 aa14.2□□□□□ -0.14
RN7SL42P-201ENST00000579786 ABCC8Q09428 1581 aa14.17□□□□□ -0.14
RN7SL42P-201ENST00000579786 GAPVD1Q14C86 1478 aa14.12□□□□□ -0.15
RN7SL42P-201ENST00000579786 FBXO41Q8TF61 875 aa14.11□□□□□ -0.15
RN7SL42P-201ENST00000579786 TOPBP1Q92547 1522 aa14.1□□□□□ -0.15
RN7SL42P-201ENST00000579786 EIF4G3O43432 1585 aaKnown RBP14.09□□□□□ -0.15
RN7SL42P-201ENST00000579786 NPM1P06748 294 aaKnown RBP eCLIP14.08□□□□□ -0.16
RN7SL42P-201ENST00000579786 FAM69CQ0P6D2 419 aa14.08□□□□□ -0.16
RN7SL42P-201ENST00000579786 TDRD9Q8NDG6 1382 aaKnown RBP14.08□□□□□ -0.16
RN7SL42P-201ENST00000579786 CHD1O14646 1710 aa14.07□□□□□ -0.16
RN7SL42P-201ENST00000579786 SYNJ1O43426 1573 aa14.05□□□□□ -0.16
RN7SL42P-201ENST00000579786 WIZO95785 1651 aa14.03□□□□□ -0.16
RN7SL42P-201ENST00000579786 CLASP1Q7Z460 1538 aa14□□□□□ -0.17
RN7SL42P-201ENST00000579786 SOGA1O94964 1423 aa14□□□□□ -0.17
RN7SL42P-201ENST00000579786 SNAPC4Q5SXM2 1469 aa13.98□□□□□ -0.17
RN7SL42P-201ENST00000579786 MAGI1Q96QZ7 1491 aaPredicted RBP13.93□□□□□ -0.18
RN7SL42P-201ENST00000579786 SYNJ2O15056 1496 aa13.93□□□□□ -0.18
RN7SL42P-201ENST00000579786 DNMBPQ6XZF7 1577 aa13.92□□□□□ -0.18
RN7SL42P-201ENST00000579786 RAD54L2Q9Y4B4 1467 aa13.91□□□□□ -0.18
RN7SL42P-201ENST00000579786 TARBP1Q13395 1621 aaKnown RBP13.9□□□□□ -0.18
RN7SL42P-201ENST00000579786 SOCS7O14512 581 aa13.9□□□□□ -0.18
RN7SL42P-201ENST00000579786 POLA1P09884 1462 aaPredicted RBP13.9□□□□□ -0.18
RN7SL42P-201ENST00000579786 GRIN2BQ13224 1484 aa13.9□□□□□ -0.18
RN7SL42P-201ENST00000579786 LMTK3Q96Q04 1460 aa13.89□□□□□ -0.19
RN7SL42P-201ENST00000579786 TOP2AP11388 1531 aaKnown RBP13.86□□□□□ -0.19
RN7SL42P-201ENST00000579786 ERCC6L2Q5T890 1561 aa13.86□□□□□ -0.19
RN7SL42P-201ENST00000579786 ABCC10Q5T3U5 1492 aa13.83□□□□□ -0.2
RN7SL42P-201ENST00000579786 CCDC88BA6NC98 1476 aa13.82□□□□□ -0.2
RN7SL42P-201ENST00000579786 WDR97A6NE52 1622 aa13.78□□□□□ -0.2
RN7SL42P-201ENST00000579786 KDM6BO15054 1643 aa13.78□□□□□ -0.2
RN7SL42P-201ENST00000579786 JPH4Q96JJ6 628 aa13.76□□□□□ -0.21
RN7SL42P-201ENST00000579786 ADGRL1O94910 1474 aa13.75□□□□□ -0.21
RN7SL42P-201ENST00000579786 HECW2Q9P2P5 1572 aa13.75□□□□□ -0.21
RN7SL42P-201ENST00000579786 PRDM2Q13029 1718 aa13.73□□□□□ -0.21
RN7SL42P-201ENST00000579786 DISP3Q9P2K9 1392 aa13.72□□□□□ -0.21
RN7SL42P-201ENST00000579786 FGD5Q6ZNL6 1462 aa13.7□□□□□ -0.22
RN7SL42P-201ENST00000579786 ILDR2Q71H61 639 aa13.7□□□□□ -0.22
RN7SL42P-201ENST00000579786 PRG4Q92954 1404 aaPredicted RBP13.7□□□□□ -0.22
RN7SL42P-201ENST00000579786 KIF13AQ9H1H9 1805 aa13.69□□□□□ -0.22
RN7SL42P-201ENST00000579786 CEP170Q5SW79 1584 aa13.68□□□□□ -0.22
RN7SL42P-201ENST00000579786 GRIN2AQ12879 1464 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms