RNA–Protein interactions for RNA: ENST00000579009.1

TNFRSF13B-202, Transcript of TNF receptor superfamily member 13B, humanhuman

Gene TNFRSF13B, Length 1,978 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF13B-202ENST00000579009 NISCHQ9Y2I1 1504 aa33.64■■■□□ 2.98
TNFRSF13B-202ENST00000579009 CCDC180Q9P1Z9 1646 aa29.41■■■□□ 2.3
TNFRSF13B-202ENST00000579009 ABCC9O60706 1549 aa28.69■■■□□ 2.18
TNFRSF13B-202ENST00000579009 ZCCHC6Q5VYS8 1495 aaKnown RBP28.2■■■□□ 2.11
TNFRSF13B-202ENST00000579009 DCAF8L2P0C7V8 631 aa27.91■■■□□ 2.06
TNFRSF13B-202ENST00000579009 SHROOM4Q9ULL8 1493 aa27.82■■■□□ 2.04
TNFRSF13B-202ENST00000579009 DCAF1Q9Y4B6 1507 aa27.81■■■□□ 2.04
TNFRSF13B-202ENST00000579009 MYO15BQ96JP2 1530 aa27.57■■■□□ 2
TNFRSF13B-202ENST00000579009 NACADO15069 1562 aa27.47■■□□□ 1.99
TNFRSF13B-202ENST00000579009 RB1CC1Q8TDY2 1594 aa27.29■■□□□ 1.96
TNFRSF13B-202ENST00000579009 SUPT5HO00267 1087 aaKnown RBP27.22■■□□□ 1.95
TNFRSF13B-202ENST00000579009 SCRIBQ14160 1630 aa27.03■■□□□ 1.92
TNFRSF13B-202ENST00000579009 UNC13AQ9UPW8 1703 aa26.85■■□□□ 1.89
TNFRSF13B-202ENST00000579009 DNAJC5BQ9UF47 199 aa26.83■■□□□ 1.89
TNFRSF13B-202ENST00000579009 PABPN1Q86U42 306 aaKnown RBP eCLIP26.81■■□□□ 1.88
TNFRSF13B-202ENST00000579009 BICRAQ9NZM4 1560 aa26.65■■□□□ 1.86
TNFRSF13B-202ENST00000579009 CHIC1Q5VXU3 224 aa26.45■■□□□ 1.82
TNFRSF13B-202ENST00000579009 CECR2Q9BXF3 1484 aa26.14■■□□□ 1.77
TNFRSF13B-202ENST00000579009 RSF1Q96T23 1441 aaPredicted RBP26.13■■□□□ 1.77
TNFRSF13B-202ENST00000579009 BAZ1AQ9NRL2 1556 aaPredicted RBP26■■□□□ 1.75
TNFRSF13B-202ENST00000579009 MROH2BQ7Z745 1585 aa25.96■■□□□ 1.75
TNFRSF13B-202ENST00000579009 CC2D2AQ9P2K1 1620 aa25.89■■□□□ 1.74
TNFRSF13B-202ENST00000579009 SMARCA4P51532 1647 aa25.89■■□□□ 1.73
TNFRSF13B-202ENST00000579009 EIF4G1Q04637 1599 aaKnown RBP25.88■■□□□ 1.73
TNFRSF13B-202ENST00000579009 WIZO95785 1651 aa25.73■■□□□ 1.71
TNFRSF13B-202ENST00000579009 PEG3Q9GZU2 1588 aa25.58■■□□□ 1.69
TNFRSF13B-202ENST00000579009 ATAD2BQ9ULI0 1458 aa25.54■■□□□ 1.68
TNFRSF13B-202ENST00000579009 SMARCA2P51531 1590 aa25.53■■□□□ 1.68
TNFRSF13B-202ENST00000579009 TRIM41Q8WV44 630 aa25.53■■□□□ 1.68
TNFRSF13B-202ENST00000579009 LOC105371045A0A1W2PR82 267 aa25.49■■□□□ 1.67
TNFRSF13B-202ENST00000579009 TOP2AP11388 1531 aaKnown RBP25.48■■□□□ 1.67
TNFRSF13B-202ENST00000579009 BAZ1BQ9UIG0 1483 aaKnown RBP25.4■■□□□ 1.66
TNFRSF13B-202ENST00000579009 NCAPD3P42695 1498 aa25.36■■□□□ 1.65
TNFRSF13B-202ENST00000579009 HMGXB3Q12766 1538 aa25.29■■□□□ 1.64
TNFRSF13B-202ENST00000579009 PCGF6Q9BYE7 350 aa25.27■■□□□ 1.64
TNFRSF13B-202ENST00000579009 CCDC88BA6NC98 1476 aa25.22■■□□□ 1.63
TNFRSF13B-202ENST00000579009 HRCP23327 699 aa25.22■■□□□ 1.63
TNFRSF13B-202ENST00000579009 FAM9AQ8IZU1 332 aaPredicted RBP25.1■■□□□ 1.61
TNFRSF13B-202ENST00000579009 TRIM26Q12899 539 aaPredicted RBP25.05■■□□□ 1.6
TNFRSF13B-202ENST00000579009 ABCC8Q09428 1581 aa24.84■■□□□ 1.57
TNFRSF13B-202ENST00000579009 NESP48681 1621 aa24.79■■□□□ 1.56
TNFRSF13B-202ENST00000579009 CFTRP13569 1480 aa24.73■■□□□ 1.55
TNFRSF13B-202ENST00000579009 EHMT2Q96KQ7 1210 aa24.73■■□□□ 1.55
TNFRSF13B-202ENST00000579009 EEA1Q15075 1411 aa24.73■■□□□ 1.55
TNFRSF13B-202ENST00000579009 CADPSQ9ULU8 1353 aa24.71■■□□□ 1.55
TNFRSF13B-202ENST00000579009 ERCC6Q03468 1493 aa24.61■■□□□ 1.53
TNFRSF13B-202ENST00000579009 WRNQ14191 1432 aaPredicted RBP eCLIP24.61■■□□□ 1.53
TNFRSF13B-202ENST00000579009 SOGA1O94964 1423 aa24.56■■□□□ 1.52
TNFRSF13B-202ENST00000579009 ZEB1P37275 1124 aaPredicted RBP24.56■■□□□ 1.52
TNFRSF13B-202ENST00000579009 PRDM2Q13029 1718 aa24.55■■□□□ 1.52
TNFRSF13B-202ENST00000579009 LAMC3Q9Y6N6 1575 aa24.53■■□□□ 1.52
TNFRSF13B-202ENST00000579009 CSRNP3Q8WYN3 585 aa24.52■■□□□ 1.52
TNFRSF13B-202ENST00000579009 TNIKQ9UKE5 1360 aa24.5■■□□□ 1.51
TNFRSF13B-202ENST00000579009 PPARGC1BQ86YN6 1023 aaKnown RBP24.46■■□□□ 1.51
TNFRSF13B-202ENST00000579009 SYNJ1O43426 1573 aa24.43■■□□□ 1.5
TNFRSF13B-202ENST00000579009 CUX2O14529 1486 aa24.43■■□□□ 1.5
TNFRSF13B-202ENST00000579009 CEP162Q5TB80 1403 aa24.43■■□□□ 1.5
TNFRSF13B-202ENST00000579009 FANCD2Q9BXW9 1451 aa24.43■■□□□ 1.5
TNFRSF13B-202ENST00000579009 GOLGA3Q08378 1498 aa24.42■■□□□ 1.5
TNFRSF13B-202ENST00000579009 KIF21AQ7Z4S6 1674 aa24.42■■□□□ 1.5
TNFRSF13B-202ENST00000579009 RUSC2Q8N2Y8 1516 aa24.4■■□□□ 1.5
TNFRSF13B-202ENST00000579009 THOC2Q8NI27 1593 aaKnown RBP24.38■■□□□ 1.49
TNFRSF13B-202ENST00000579009 PDS5BQ9NTI5 1447 aa24.38■■□□□ 1.49
TNFRSF13B-202ENST00000579009 UBTFP17480 764 aaKnown RBP24.34■■□□□ 1.49
TNFRSF13B-202ENST00000579009 CEP164Q9UPV0 1460 aa24.32■■□□□ 1.48
TNFRSF13B-202ENST00000579009 KIF21BO75037 1637 aa24.32■■□□□ 1.48
TNFRSF13B-202ENST00000579009 TOP2BQ02880 1626 aa24.31■■□□□ 1.48
TNFRSF13B-202ENST00000579009 CUX1P39880 1505 aa24.29■■□□□ 1.48
TNFRSF13B-202ENST00000579009 BIVM-ERCC5R4GMW8 1640 aa24.27■■□□□ 1.48
TNFRSF13B-202ENST00000579009 DNAJC5Q9H3Z4 198 aa24.23■■□□□ 1.47
TNFRSF13B-202ENST00000579009 DNMBPQ6XZF7 1577 aa24.15■■□□□ 1.46
TNFRSF13B-202ENST00000579009 TOPBP1Q92547 1522 aa24.13■■□□□ 1.45
TNFRSF13B-202ENST00000579009 URB2Q14146 1524 aaKnown RBP24.11■■□□□ 1.45
TNFRSF13B-202ENST00000579009 MRC2Q9UBG0 1479 aa24.1■■□□□ 1.45
TNFRSF13B-202ENST00000579009 FGD5Q6ZNL6 1462 aa24.08■■□□□ 1.45
TNFRSF13B-202ENST00000579009 CLIP1P30622 1438 aa24.06■■□□□ 1.44
TNFRSF13B-202ENST00000579009 WDR62O43379 1518 aa24.06■■□□□ 1.44
TNFRSF13B-202ENST00000579009 RAPGEF2Q9Y4G8 1499 aa24.02■■□□□ 1.44
TNFRSF13B-202ENST00000579009 ERICH3Q5RHP9 1530 aa24■■□□□ 1.43
TNFRSF13B-202ENST00000579009 POLA1P09884 1462 aaPredicted RBP23.99■■□□□ 1.43
TNFRSF13B-202ENST00000579009 VPS8Q8N3P4 1428 aa23.96■■□□□ 1.43
TNFRSF13B-202ENST00000579009 CCER1Q8TC90 406 aaPredicted RBP23.96■■□□□ 1.43
TNFRSF13B-202ENST00000579009 KIF27Q86VH2 1401 aa23.93■■□□□ 1.42
TNFRSF13B-202ENST00000579009 PRXQ9BXM0 1461 aa23.92■■□□□ 1.42
TNFRSF13B-202ENST00000579009 RAD54L2Q9Y4B4 1467 aa23.91■■□□□ 1.42
TNFRSF13B-202ENST00000579009 TTBK1Q5TCY1 1321 aaPredicted RBP23.91■■□□□ 1.42
TNFRSF13B-202ENST00000579009 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.9■■□□□ 1.42
TNFRSF13B-202ENST00000579009 APLP2Q06481 763 aa23.88■■□□□ 1.41
TNFRSF13B-202ENST00000579009 ABCA10Q8WWZ4 1543 aa23.87■■□□□ 1.41
TNFRSF13B-202ENST00000579009 TARBP1Q13395 1621 aaKnown RBP23.76■■□□□ 1.39
TNFRSF13B-202ENST00000579009 WDR97A6NE52 1622 aa23.76■■□□□ 1.39
TNFRSF13B-202ENST00000579009 IFT140Q96RY7 1462 aa23.74■■□□□ 1.39
TNFRSF13B-202ENST00000579009 IGF1RP08069 1367 aa23.72■■□□□ 1.39
TNFRSF13B-202ENST00000579009 TDRD9Q8NDG6 1382 aaKnown RBP23.72■■□□□ 1.39
TNFRSF13B-202ENST00000579009 RANGAP1P46060 587 aaPredicted RBP23.69■■□□□ 1.38
TNFRSF13B-202ENST00000579009 ARAP1Q96P48 1450 aa23.67■■□□□ 1.38
TNFRSF13B-202ENST00000579009 ZNF608Q9ULD9 1512 aaPredicted RBP23.66■■□□□ 1.38
TNFRSF13B-202ENST00000579009 GAPVD1Q14C86 1478 aa23.66■■□□□ 1.38
TNFRSF13B-202ENST00000579009 ABCA5Q8WWZ7 1642 aa23.66■■□□□ 1.38
TNFRSF13B-202ENST00000579009 CARMIL1Q5VZK9 1371 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms