RNA–Protein interactions for RNA: ENST00000578861.5

SNX11-205, Transcript of sorting nexin 11, humanhuman

TSL 4

Gene SNX11, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-205ENST00000578861 NISCHQ9Y2I1 1504 aa22.52■■□□□ 1.19
SNX11-205ENST00000578861 ABCC9O60706 1549 aa21.7■■□□□ 1.06
SNX11-205ENST00000578861 DNAJC5BQ9UF47 199 aa21.26■□□□□ 0.99
SNX11-205ENST00000578861 CCDC180Q9P1Z9 1646 aa20.42■□□□□ 0.86
SNX11-205ENST00000578861 PABPN1Q86U42 306 aaKnown RBP eCLIP20.19■□□□□ 0.82
SNX11-205ENST00000578861 DNAJC5Q9H3Z4 198 aa20.18■□□□□ 0.82
SNX11-205ENST00000578861 RB1CC1Q8TDY2 1594 aa20.06■□□□□ 0.8
SNX11-205ENST00000578861 DCAF8L2P0C7V8 631 aa19.85■□□□□ 0.77
SNX11-205ENST00000578861 NACADO15069 1562 aa19.66■□□□□ 0.74
SNX11-205ENST00000578861 CECR2Q9BXF3 1484 aa19.6■□□□□ 0.73
SNX11-205ENST00000578861 BICRAQ9NZM4 1560 aa19.47■□□□□ 0.71
SNX11-205ENST00000578861 UNC13AQ9UPW8 1703 aa19.42■□□□□ 0.7
SNX11-205ENST00000578861 CC2D2AQ9P2K1 1620 aa19.4■□□□□ 0.7
SNX11-205ENST00000578861 EIF4G1Q04637 1599 aaKnown RBP19.11■□□□□ 0.65
SNX11-205ENST00000578861 TRIM41Q8WV44 630 aa19.08■□□□□ 0.64
SNX11-205ENST00000578861 SHROOM4Q9ULL8 1493 aa19.03■□□□□ 0.64
SNX11-205ENST00000578861 MYO15BQ96JP2 1530 aa18.99■□□□□ 0.63
SNX11-205ENST00000578861 CUX2O14529 1486 aa18.95■□□□□ 0.62
SNX11-205ENST00000578861 ERCC6Q03468 1493 aa18.82■□□□□ 0.6
SNX11-205ENST00000578861 SCRIBQ14160 1630 aa18.79■□□□□ 0.6
SNX11-205ENST00000578861 DCAF1Q9Y4B6 1507 aa18.42■□□□□ 0.54
SNX11-205ENST00000578861 ZCCHC6Q5VYS8 1495 aaKnown RBP18.41■□□□□ 0.54
SNX11-205ENST00000578861 NESP48681 1621 aa18.33■□□□□ 0.52
SNX11-205ENST00000578861 NCAPD3P42695 1498 aa18.23■□□□□ 0.51
SNX11-205ENST00000578861 AEBP2Q6ZN18 517 aaPredicted RBP18.2■□□□□ 0.5
SNX11-205ENST00000578861 THOC2Q8NI27 1593 aaKnown RBP18.15■□□□□ 0.5
SNX11-205ENST00000578861 SMARCA2P51531 1590 aa18.13■□□□□ 0.49
SNX11-205ENST00000578861 OSCARQ8IYS5 282 aa18.13■□□□□ 0.49
SNX11-205ENST00000578861 ATAD2BQ9ULI0 1458 aa18.07■□□□□ 0.48
SNX11-205ENST00000578861 TRHP20396 242 aaPredicted RBP18.02■□□□□ 0.48
SNX11-205ENST00000578861 PDS5BQ9NTI5 1447 aa17.98■□□□□ 0.47
SNX11-205ENST00000578861 BAZ1AQ9NRL2 1556 aaPredicted RBP17.92■□□□□ 0.46
SNX11-205ENST00000578861 HMGXB3Q12766 1538 aa17.91■□□□□ 0.46
SNX11-205ENST00000578861 LAMC3Q9Y6N6 1575 aa17.9■□□□□ 0.46
SNX11-205ENST00000578861 KIF21AQ7Z4S6 1674 aa17.88■□□□□ 0.45
SNX11-205ENST00000578861 BAZ1BQ9UIG0 1483 aaKnown RBP17.87■□□□□ 0.45
SNX11-205ENST00000578861 CYB5RLQ6IPT4 315 aa17.85■□□□□ 0.45
SNX11-205ENST00000578861 MRC2Q9UBG0 1479 aa17.82■□□□□ 0.44
SNX11-205ENST00000578861 RIMBP3CA6NJZ7 1639 aa17.8■□□□□ 0.44
SNX11-205ENST00000578861 RIMBP3BA6NNM3 1639 aa17.8■□□□□ 0.44
SNX11-205ENST00000578861 RIMBP3Q9UFD9 1639 aa17.8■□□□□ 0.44
SNX11-205ENST00000578861 WDR62O43379 1518 aa17.72■□□□□ 0.43
SNX11-205ENST00000578861 SMARCA4P51532 1647 aa17.72■□□□□ 0.43
SNX11-205ENST00000578861 CADPSQ9ULU8 1353 aa17.7■□□□□ 0.42
SNX11-205ENST00000578861 ARHGEF11O15085 1522 aa17.68■□□□□ 0.42
SNX11-205ENST00000578861 CEP164Q9UPV0 1460 aa17.58■□□□□ 0.41
SNX11-205ENST00000578861 ILDR1Q86SU0 546 aaPredicted RBP17.5■□□□□ 0.39
SNX11-205ENST00000578861 FANCD2Q9BXW9 1451 aa17.5■□□□□ 0.39
SNX11-205ENST00000578861 PEG3Q9GZU2 1588 aa17.47■□□□□ 0.39
SNX11-205ENST00000578861 ARAP1Q96P48 1450 aa17.45■□□□□ 0.38
SNX11-205ENST00000578861 FBLN2P98095 1184 aa17.41■□□□□ 0.38
SNX11-205ENST00000578861 URB2Q14146 1524 aaKnown RBP17.38■□□□□ 0.37
SNX11-205ENST00000578861 MROH2BQ7Z745 1585 aa17.38■□□□□ 0.37
SNX11-205ENST00000578861 ZNF608Q9ULD9 1512 aaPredicted RBP17.37■□□□□ 0.37
SNX11-205ENST00000578861 IFT140Q96RY7 1462 aa17.25■□□□□ 0.35
SNX11-205ENST00000578861 RSF1Q96T23 1441 aaPredicted RBP17.25■□□□□ 0.35
SNX11-205ENST00000578861 CFTRP13569 1480 aa17.23■□□□□ 0.35
SNX11-205ENST00000578861 AQRO60306 1485 aaKnown RBP eCLIP17.15■□□□□ 0.34
SNX11-205ENST00000578861 CHD1O14646 1710 aa17.1■□□□□ 0.33
SNX11-205ENST00000578861 EIF4G3O43432 1585 aaKnown RBP17.1■□□□□ 0.33
SNX11-205ENST00000578861 WIZO95785 1651 aa17.08■□□□□ 0.32
SNX11-205ENST00000578861 CHMP7Q8WUX9 453 aaPredicted RBP17.04■□□□□ 0.32
SNX11-205ENST00000578861 TOPBP1Q92547 1522 aa17.01■□□□□ 0.31
SNX11-205ENST00000578861 KDM4FA0A1W2PPD8 638 aa16.99■□□□□ 0.31
SNX11-205ENST00000578861 GAPVD1Q14C86 1478 aa16.95■□□□□ 0.3
SNX11-205ENST00000578861 TDRD9Q8NDG6 1382 aaKnown RBP16.94■□□□□ 0.3
SNX11-205ENST00000578861 CLASP1Q7Z460 1538 aa16.91■□□□□ 0.3
SNX11-205ENST00000578861 ABCC8Q09428 1581 aa16.89■□□□□ 0.29
SNX11-205ENST00000578861 SNAPC4Q5SXM2 1469 aa16.87■□□□□ 0.29
SNX11-205ENST00000578861 SYNJ1O43426 1573 aa16.87■□□□□ 0.29
SNX11-205ENST00000578861 TARBP1Q13395 1621 aaKnown RBP16.84■□□□□ 0.29
SNX11-205ENST00000578861 RAD54L2Q9Y4B4 1467 aa16.83■□□□□ 0.28
SNX11-205ENST00000578861 DNMBPQ6XZF7 1577 aa16.81■□□□□ 0.28
SNX11-205ENST00000578861 SOGA1O94964 1423 aa16.79■□□□□ 0.28
SNX11-205ENST00000578861 FAM69CQ0P6D2 419 aa16.79■□□□□ 0.28
SNX11-205ENST00000578861 POLA1P09884 1462 aaPredicted RBP16.79■□□□□ 0.28
SNX11-205ENST00000578861 TOP2AP11388 1531 aaKnown RBP16.78■□□□□ 0.28
SNX11-205ENST00000578861 MAGI1Q96QZ7 1491 aaPredicted RBP16.73■□□□□ 0.27
SNX11-205ENST00000578861 SYNJ2O15056 1496 aa16.72■□□□□ 0.27
SNX11-205ENST00000578861 CCDC88BA6NC98 1476 aa16.71■□□□□ 0.27
SNX11-205ENST00000578861 PRDM2Q13029 1718 aa16.7■□□□□ 0.26
SNX11-205ENST00000578861 FBXO41Q8TF61 875 aa16.7■□□□□ 0.26
SNX11-205ENST00000578861 GRIN2BQ13224 1484 aa16.68■□□□□ 0.26
SNX11-205ENST00000578861 ERCC6L2Q5T890 1561 aa16.68■□□□□ 0.26
SNX11-205ENST00000578861 NPM1P06748 294 aaKnown RBP eCLIP16.64■□□□□ 0.25
SNX11-205ENST00000578861 KIF13AQ9H1H9 1805 aa16.61■□□□□ 0.25
SNX11-205ENST00000578861 KDM6BO15054 1643 aa16.58■□□□□ 0.24
SNX11-205ENST00000578861 HECW2Q9P2P5 1572 aa16.57■□□□□ 0.24
SNX11-205ENST00000578861 ABCC10Q5T3U5 1492 aa16.57■□□□□ 0.24
SNX11-205ENST00000578861 FGD5Q6ZNL6 1462 aa16.57■□□□□ 0.24
SNX11-205ENST00000578861 LMTK3Q96Q04 1460 aa16.55■□□□□ 0.24
SNX11-205ENST00000578861 ADGRL1O94910 1474 aa16.54■□□□□ 0.24
SNX11-205ENST00000578861 CEP170Q5SW79 1584 aa16.52■□□□□ 0.24
SNX11-205ENST00000578861 WDR97A6NE52 1622 aa16.52■□□□□ 0.23
SNX11-205ENST00000578861 GRIN2AQ12879 1464 aa16.45■□□□□ 0.22
SNX11-205ENST00000578861 PRG4Q92954 1404 aaPredicted RBP16.45■□□□□ 0.22
SNX11-205ENST00000578861 SOCS7O14512 581 aa16.44■□□□□ 0.22
SNX11-205ENST00000578861 ILDR2Q71H61 639 aa16.41■□□□□ 0.22
SNX11-205ENST00000578861 JPH4Q96JJ6 628 aa16.41■□□□□ 0.22
SNX11-205ENST00000578861 DIP2BQ9P265 1576 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms