RNA–Protein interactions for RNA: ENST00000578630.1

ERBB2-208, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2

Gene ERBB2, Length 874 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-208ENST00000578630 NISCHQ9Y2I1 1504 aa27.44■■□□□ 1.98
ERBB2-208ENST00000578630 CCDC180Q9P1Z9 1646 aa24.23■■□□□ 1.47
ERBB2-208ENST00000578630 ABCC9O60706 1549 aa23.7■■□□□ 1.38
ERBB2-208ENST00000578630 DCAF8L2P0C7V8 631 aa23.11■■□□□ 1.29
ERBB2-208ENST00000578630 NACADO15069 1562 aa22.86■■□□□ 1.25
ERBB2-208ENST00000578630 RB1CC1Q8TDY2 1594 aa22.84■■□□□ 1.25
ERBB2-208ENST00000578630 ZCCHC6Q5VYS8 1495 aaKnown RBP22.83■■□□□ 1.25
ERBB2-208ENST00000578630 MYO15BQ96JP2 1530 aa22.76■■□□□ 1.23
ERBB2-208ENST00000578630 DCAF1Q9Y4B6 1507 aa22.7■■□□□ 1.22
ERBB2-208ENST00000578630 PABPN1Q86U42 306 aaKnown RBP eCLIP22.27■■□□□ 1.16
ERBB2-208ENST00000578630 UNC13AQ9UPW8 1703 aa22.16■■□□□ 1.14
ERBB2-208ENST00000578630 SCRIBQ14160 1630 aa22.15■■□□□ 1.14
ERBB2-208ENST00000578630 BICRAQ9NZM4 1560 aa22.06■■□□□ 1.12
ERBB2-208ENST00000578630 SHROOM4Q9ULL8 1493 aa21.91■■□□□ 1.1
ERBB2-208ENST00000578630 DNAJC5BQ9UF47 199 aa21.69■■□□□ 1.06
ERBB2-208ENST00000578630 EIF4G1Q04637 1599 aaKnown RBP21.52■■□□□ 1.04
ERBB2-208ENST00000578630 CC2D2AQ9P2K1 1620 aa21.4■■□□□ 1.02
ERBB2-208ENST00000578630 CECR2Q9BXF3 1484 aa21.36■■□□□ 1.01
ERBB2-208ENST00000578630 BAZ1AQ9NRL2 1556 aaPredicted RBP21.26■□□□□ 0.99
ERBB2-208ENST00000578630 SMARCA4P51532 1647 aa21.2■□□□□ 0.98
ERBB2-208ENST00000578630 ATAD2BQ9ULI0 1458 aa21.13■□□□□ 0.97
ERBB2-208ENST00000578630 MROH2BQ7Z745 1585 aa21.13■□□□□ 0.97
ERBB2-208ENST00000578630 NCAPD3P42695 1498 aa21.13■□□□□ 0.97
ERBB2-208ENST00000578630 SMARCA2P51531 1590 aa21.1■□□□□ 0.97
ERBB2-208ENST00000578630 PEG3Q9GZU2 1588 aa20.99■□□□□ 0.95
ERBB2-208ENST00000578630 RSF1Q96T23 1441 aaPredicted RBP20.99■□□□□ 0.95
ERBB2-208ENST00000578630 BAZ1BQ9UIG0 1483 aaKnown RBP20.97■□□□□ 0.95
ERBB2-208ENST00000578630 HMGXB3Q12766 1538 aa20.94■□□□□ 0.94
ERBB2-208ENST00000578630 WIZO95785 1651 aa20.87■□□□□ 0.93
ERBB2-208ENST00000578630 SUPT5HO00267 1087 aaKnown RBP20.7■□□□□ 0.9
ERBB2-208ENST00000578630 TOP2AP11388 1531 aaKnown RBP20.68■□□□□ 0.9
ERBB2-208ENST00000578630 CADPSQ9ULU8 1353 aa20.57■□□□□ 0.88
ERBB2-208ENST00000578630 NESP48681 1621 aa20.52■□□□□ 0.88
ERBB2-208ENST00000578630 CCDC88BA6NC98 1476 aa20.5■□□□□ 0.87
ERBB2-208ENST00000578630 LAMC3Q9Y6N6 1575 aa20.49■□□□□ 0.87
ERBB2-208ENST00000578630 ERCC6Q03468 1493 aa20.47■□□□□ 0.87
ERBB2-208ENST00000578630 PDS5BQ9NTI5 1447 aa20.46■□□□□ 0.87
ERBB2-208ENST00000578630 CFTRP13569 1480 aa20.41■□□□□ 0.86
ERBB2-208ENST00000578630 FANCD2Q9BXW9 1451 aa20.27■□□□□ 0.84
ERBB2-208ENST00000578630 CEP164Q9UPV0 1460 aa20.22■□□□□ 0.83
ERBB2-208ENST00000578630 KIF21AQ7Z4S6 1674 aa20.18■□□□□ 0.82
ERBB2-208ENST00000578630 CUX2O14529 1486 aa20.17■□□□□ 0.82
ERBB2-208ENST00000578630 MRC2Q9UBG0 1479 aa20.16■□□□□ 0.82
ERBB2-208ENST00000578630 PRDM2Q13029 1718 aa20.09■□□□□ 0.81
ERBB2-208ENST00000578630 THOC2Q8NI27 1593 aaKnown RBP20.08■□□□□ 0.81
ERBB2-208ENST00000578630 WDR62O43379 1518 aa20.03■□□□□ 0.8
ERBB2-208ENST00000578630 ABCC8Q09428 1581 aa20.02■□□□□ 0.8
ERBB2-208ENST00000578630 URB2Q14146 1524 aaKnown RBP20■□□□□ 0.79
ERBB2-208ENST00000578630 TOPBP1Q92547 1522 aa19.93■□□□□ 0.78
ERBB2-208ENST00000578630 DNMBPQ6XZF7 1577 aa19.89■□□□□ 0.77
ERBB2-208ENST00000578630 IFT140Q96RY7 1462 aa19.81■□□□□ 0.76
ERBB2-208ENST00000578630 WRNQ14191 1432 aaPredicted RBP eCLIP19.8■□□□□ 0.76
ERBB2-208ENST00000578630 CUX1P39880 1505 aa19.8■□□□□ 0.76
ERBB2-208ENST00000578630 SOGA1O94964 1423 aa19.79■□□□□ 0.76
ERBB2-208ENST00000578630 POLA1P09884 1462 aaPredicted RBP19.77■□□□□ 0.76
ERBB2-208ENST00000578630 FGD5Q6ZNL6 1462 aa19.74■□□□□ 0.75
ERBB2-208ENST00000578630 RAD54L2Q9Y4B4 1467 aa19.71■□□□□ 0.75
ERBB2-208ENST00000578630 ZNF608Q9ULD9 1512 aaPredicted RBP19.66■□□□□ 0.74
ERBB2-208ENST00000578630 TOP2BQ02880 1626 aa19.66■□□□□ 0.74
ERBB2-208ENST00000578630 TDRD9Q8NDG6 1382 aaKnown RBP19.65■□□□□ 0.74
ERBB2-208ENST00000578630 TARBP1Q13395 1621 aaKnown RBP19.64■□□□□ 0.73
ERBB2-208ENST00000578630 SYNJ1O43426 1573 aa19.63■□□□□ 0.73
ERBB2-208ENST00000578630 AQRO60306 1485 aaKnown RBP eCLIP19.63■□□□□ 0.739e-9■■■■■ 34.5
ERBB2-208ENST00000578630 BIVM-ERCC5R4GMW8 1640 aa19.62■□□□□ 0.73
ERBB2-208ENST00000578630 ABCA10Q8WWZ4 1543 aa19.57■□□□□ 0.72
ERBB2-208ENST00000578630 TRIM41Q8WV44 630 aa19.57■□□□□ 0.72
ERBB2-208ENST00000578630 WDR97A6NE52 1622 aa19.53■□□□□ 0.72
ERBB2-208ENST00000578630 OSCARQ8IYS5 282 aa19.52■□□□□ 0.72
ERBB2-208ENST00000578630 GAPVD1Q14C86 1478 aa19.52■□□□□ 0.72
ERBB2-208ENST00000578630 EIF4G3O43432 1585 aaKnown RBP19.52■□□□□ 0.71
ERBB2-208ENST00000578630 FBLN2P98095 1184 aa19.5■□□□□ 0.71
ERBB2-208ENST00000578630 DNAJC5Q9H3Z4 198 aa19.5■□□□□ 0.71
ERBB2-208ENST00000578630 GRIN2BQ13224 1484 aa19.49■□□□□ 0.71
ERBB2-208ENST00000578630 CHMP7Q8WUX9 453 aaPredicted RBP19.46■□□□□ 0.71
ERBB2-208ENST00000578630 KIF27Q86VH2 1401 aa19.42■□□□□ 0.7
ERBB2-208ENST00000578630 SNAPC4Q5SXM2 1469 aa19.41■□□□□ 0.7
ERBB2-208ENST00000578630 MAGI1Q96QZ7 1491 aaPredicted RBP19.41■□□□□ 0.7
ERBB2-208ENST00000578630 ABCA5Q8WWZ7 1642 aa19.39■□□□□ 0.69
ERBB2-208ENST00000578630 CHIC1Q5VXU3 224 aa19.36■□□□□ 0.69
ERBB2-208ENST00000578630 IGF1RP08069 1367 aa19.33■□□□□ 0.69
ERBB2-208ENST00000578630 ERICH3Q5RHP9 1530 aa19.33■□□□□ 0.68
ERBB2-208ENST00000578630 SYNJ2O15056 1496 aa19.33■□□□□ 0.68
ERBB2-208ENST00000578630 PBRM1Q86U86 1689 aa19.31■□□□□ 0.68
ERBB2-208ENST00000578630 FHAD1B1AJZ9 1412 aa19.31■□□□□ 0.68
ERBB2-208ENST00000578630 CARMIL1Q5VZK9 1371 aa19.23■□□□□ 0.67
ERBB2-208ENST00000578630 CHD1O14646 1710 aa19.22■□□□□ 0.67
ERBB2-208ENST00000578630 GRIN2AQ12879 1464 aa19.21■□□□□ 0.67
ERBB2-208ENST00000578630 RUSC2Q8N2Y8 1516 aa19.2■□□□□ 0.66
ERBB2-208ENST00000578630 ADAMTS12P58397 1594 aa19.2■□□□□ 0.66
ERBB2-208ENST00000578630 CSRNP3Q8WYN3 585 aa19.18■□□□□ 0.66
ERBB2-208ENST00000578630 EEA1Q15075 1411 aa19.14■□□□□ 0.65
ERBB2-208ENST00000578630 CUL7Q14999 1698 aa19.14■□□□□ 0.65
ERBB2-208ENST00000578630 FAM9AQ8IZU1 332 aaPredicted RBP19.13■□□□□ 0.65
ERBB2-208ENST00000578630 NUP160Q12769 1436 aa19.12■□□□□ 0.65
ERBB2-208ENST00000578630 RAPGEF2Q9Y4G8 1499 aa19.09■□□□□ 0.65
ERBB2-208ENST00000578630 JPH4Q96JJ6 628 aa19.08■□□□□ 0.64
ERBB2-208ENST00000578630 CLASP1Q7Z460 1538 aa19.06■□□□□ 0.64
ERBB2-208ENST00000578630 CEP170Q5SW79 1584 aa19.04■□□□□ 0.64
ERBB2-208ENST00000578630 PRXQ9BXM0 1461 aa19.02■□□□□ 0.63
ERBB2-208ENST00000578630 KIAA0586Q9BVV6 1533 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms