RNA–Protein interactions for RNA: ENST00000577681.1

CCL13-202, Transcript of C-C motif chemokine ligand 13, humanhuman

TSL 1 (best)

Gene CCL13, Length 669 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13-202ENST00000577681 AEBP2Q6ZN18 517 aaPredicted RBP19.72■□□□□ 0.75
CCL13-202ENST00000577681 NISCHQ9Y2I1 1504 aa19.16■□□□□ 0.66
CCL13-202ENST00000577681 CHIC1Q5VXU3 224 aa19.05■□□□□ 0.64
CCL13-202ENST00000577681 CCDC180Q9P1Z9 1646 aa16.99■□□□□ 0.31
CCL13-202ENST00000577681 PHF23Q9BUL5 403 aaPredicted RBP16.85■□□□□ 0.29
CCL13-202ENST00000577681 ABCC9O60706 1549 aa16.65■□□□□ 0.26
CCL13-202ENST00000577681 SENP3Q9H4L4 574 aaPredicted RBP16.58■□□□□ 0.24
CCL13-202ENST00000577681 ZCCHC6Q5VYS8 1495 aaKnown RBP16.01■□□□□ 0.15
CCL13-202ENST00000577681 MYO15BQ96JP2 1530 aa15.98■□□□□ 0.15
CCL13-202ENST00000577681 DCAF1Q9Y4B6 1507 aa15.97■□□□□ 0.15
CCL13-202ENST00000577681 DNAJC5BQ9UF47 199 aa15.91■□□□□ 0.14
CCL13-202ENST00000577681 NACADO15069 1562 aa15.91■□□□□ 0.14
CCL13-202ENST00000577681 RB1CC1Q8TDY2 1594 aa15.83■□□□□ 0.12
CCL13-202ENST00000577681 DCAF8L2P0C7V8 631 aa15.69■□□□□ 0.1
CCL13-202ENST00000577681 FOXD1Q16676 465 aa15.51■□□□□ 0.07
CCL13-202ENST00000577681 UNC13AQ9UPW8 1703 aa15.49■□□□□ 0.07
CCL13-202ENST00000577681 PABPN1Q86U42 306 aaKnown RBP eCLIP15.49■□□□□ 0.07
CCL13-202ENST00000577681 SCRIBQ14160 1630 aa15.36■□□□□ 0.05
CCL13-202ENST00000577681 PLPPR3Q6T4P5 718 aa15.36■□□□□ 0.05
CCL13-202ENST00000577681 BICRAQ9NZM4 1560 aa15.36■□□□□ 0.05
CCL13-202ENST00000577681 SHROOM4Q9ULL8 1493 aa15.32■□□□□ 0.04
CCL13-202ENST00000577681 CECR2Q9BXF3 1484 aa15.01□□□□□ -0.01
CCL13-202ENST00000577681 CC2D2AQ9P2K1 1620 aa14.94□□□□□ -0.02
CCL13-202ENST00000577681 PPP6R1Q9UPN7 881 aa14.92□□□□□ -0.02
CCL13-202ENST00000577681 EIF4G1Q04637 1599 aaKnown RBP14.9□□□□□ -0.02
CCL13-202ENST00000577681 ADRA2BP18089 450 aa14.87□□□□□ -0.03
CCL13-202ENST00000577681 DNAJC5Q9H3Z4 198 aa14.87□□□□□ -0.03
CCL13-202ENST00000577681 BAZ1AQ9NRL2 1556 aaPredicted RBP14.84□□□□□ -0.03
CCL13-202ENST00000577681 SMARCA4P51532 1647 aa14.81□□□□□ -0.04
CCL13-202ENST00000577681 PEG3Q9GZU2 1588 aa14.74□□□□□ -0.05
CCL13-202ENST00000577681 MROH2BQ7Z745 1585 aa14.73□□□□□ -0.05
CCL13-202ENST00000577681 SMARCA2P51531 1590 aa14.68□□□□□ -0.06
CCL13-202ENST00000577681 NCAPD3P42695 1498 aa14.68□□□□□ -0.06
CCL13-202ENST00000577681 ATAD2BQ9ULI0 1458 aa14.67□□□□□ -0.06
CCL13-202ENST00000577681 RSF1Q96T23 1441 aaPredicted RBP14.66□□□□□ -0.06
CCL13-202ENST00000577681 HMGXB3Q12766 1538 aa14.61□□□□□ -0.07
CCL13-202ENST00000577681 WIZO95785 1651 aa14.56□□□□□ -0.08
CCL13-202ENST00000577681 PIAS4Q8N2W9 510 aaPredicted RBP14.54□□□□□ -0.08
CCL13-202ENST00000577681 BAZ1BQ9UIG0 1483 aaKnown RBP14.52□□□□□ -0.08
CCL13-202ENST00000577681 TOP2AP11388 1531 aaKnown RBP14.47□□□□□ -0.09
CCL13-202ENST00000577681 CUX2O14529 1486 aa14.44□□□□□ -0.1
CCL13-202ENST00000577681 ERCC6Q03468 1493 aa14.42□□□□□ -0.1
CCL13-202ENST00000577681 SUPT5HO00267 1087 aaKnown RBP14.29□□□□□ -0.12
CCL13-202ENST00000577681 CCDC88BA6NC98 1476 aa14.27□□□□□ -0.12
CCL13-202ENST00000577681 LAMC3Q9Y6N6 1575 aa14.24□□□□□ -0.13
CCL13-202ENST00000577681 CADPSQ9ULU8 1353 aa14.22□□□□□ -0.13
CCL13-202ENST00000577681 CFTRP13569 1480 aa14.2□□□□□ -0.14
CCL13-202ENST00000577681 MSH5O43196 834 aa14.2□□□□□ -0.14
CCL13-202ENST00000577681 TRIM41Q8WV44 630 aa14.18□□□□□ -0.14
CCL13-202ENST00000577681 NESP48681 1621 aa14.16□□□□□ -0.14
CCL13-202ENST00000577681 PRDM2Q13029 1718 aa14.15□□□□□ -0.14
CCL13-202ENST00000577681 PDS5BQ9NTI5 1447 aa14.1□□□□□ -0.15
CCL13-202ENST00000577681 THOC2Q8NI27 1593 aaKnown RBP14.02□□□□□ -0.16
CCL13-202ENST00000577681 KIF21AQ7Z4S6 1674 aa14.01□□□□□ -0.17
CCL13-202ENST00000577681 FANCD2Q9BXW9 1451 aa14.01□□□□□ -0.17
CCL13-202ENST00000577681 CEP164Q9UPV0 1460 aa13.98□□□□□ -0.17
CCL13-202ENST00000577681 MRC2Q9UBG0 1479 aa13.93□□□□□ -0.18
CCL13-202ENST00000577681 ABCC8Q09428 1581 aa13.92□□□□□ -0.18
CCL13-202ENST00000577681 WDR62O43379 1518 aa13.9□□□□□ -0.18
CCL13-202ENST00000577681 URB2Q14146 1524 aaKnown RBP13.87□□□□□ -0.19
CCL13-202ENST00000577681 DNMBPQ6XZF7 1577 aa13.86□□□□□ -0.19
CCL13-202ENST00000577681 TOPBP1Q92547 1522 aa13.84□□□□□ -0.19
CCL13-202ENST00000577681 CUX1P39880 1505 aa13.8□□□□□ -0.2
CCL13-202ENST00000577681 WRNQ14191 1432 aaPredicted RBP eCLIP13.8□□□□□ -0.2
CCL13-202ENST00000577681 BIVM-ERCC5R4GMW8 1640 aa13.79□□□□□ -0.2
CCL13-202ENST00000577681 OSCARQ8IYS5 282 aa13.79□□□□□ -0.2
CCL13-202ENST00000577681 TOP2BQ02880 1626 aa13.79□□□□□ -0.2
CCL13-202ENST00000577681 SYNJ1O43426 1573 aa13.74□□□□□ -0.21
CCL13-202ENST00000577681 POLA1P09884 1462 aaPredicted RBP13.73□□□□□ -0.21
CCL13-202ENST00000577681 IFT140Q96RY7 1462 aa13.71□□□□□ -0.21
CCL13-202ENST00000577681 FGD5Q6ZNL6 1462 aa13.7□□□□□ -0.22
CCL13-202ENST00000577681 TARBP1Q13395 1621 aaKnown RBP13.7□□□□□ -0.22
CCL13-202ENST00000577681 WDR97A6NE52 1622 aa13.68□□□□□ -0.22
CCL13-202ENST00000577681 SOGA1O94964 1423 aa13.66□□□□□ -0.22
CCL13-202ENST00000577681 ABCA10Q8WWZ4 1543 aa13.64□□□□□ -0.23
CCL13-202ENST00000577681 RAD54L2Q9Y4B4 1467 aa13.61□□□□□ -0.23
CCL13-202ENST00000577681 PPP4R3CPQ6ZMV5 832 aa13.59□□□□□ -0.23
CCL13-202ENST00000577681 ZNF608Q9ULD9 1512 aaPredicted RBP13.57□□□□□ -0.24
CCL13-202ENST00000577681 ABCA5Q8WWZ7 1642 aa13.57□□□□□ -0.24
CCL13-202ENST00000577681 EIF4G3O43432 1585 aaKnown RBP13.55□□□□□ -0.24
CCL13-202ENST00000577681 RIMBP3CA6NJZ7 1639 aa13.55□□□□□ -0.24
CCL13-202ENST00000577681 RIMBP3BA6NNM3 1639 aa13.55□□□□□ -0.24
CCL13-202ENST00000577681 RIMBP3Q9UFD9 1639 aa13.55□□□□□ -0.24
CCL13-202ENST00000577681 MAPK8IP2Q13387 824 aaPredicted RBP13.55□□□□□ -0.24
CCL13-202ENST00000577681 TRHP20396 242 aaPredicted RBP13.53□□□□□ -0.24
CCL13-202ENST00000577681 CYB5RLQ6IPT4 315 aa13.53□□□□□ -0.24
CCL13-202ENST00000577681 TDRD9Q8NDG6 1382 aaKnown RBP13.52□□□□□ -0.25
CCL13-202ENST00000577681 ARHGEF11O15085 1522 aa13.51□□□□□ -0.25
CCL13-202ENST00000577681 AQRO60306 1485 aaKnown RBP eCLIP13.51□□□□□ -0.25
CCL13-202ENST00000577681 GAPVD1Q14C86 1478 aa13.51□□□□□ -0.25
CCL13-202ENST00000577681 GRIN2BQ13224 1484 aa13.5□□□□□ -0.25
CCL13-202ENST00000577681 KIF27Q86VH2 1401 aa13.5□□□□□ -0.25
CCL13-202ENST00000577681 ERICH3Q5RHP9 1530 aa13.49□□□□□ -0.25
CCL13-202ENST00000577681 PBRM1Q86U86 1689 aa13.48□□□□□ -0.25
CCL13-202ENST00000577681 MAGI1Q96QZ7 1491 aaPredicted RBP13.47□□□□□ -0.25
CCL13-202ENST00000577681 EEA1Q15075 1411 aa13.45□□□□□ -0.26
CCL13-202ENST00000577681 IGF1RP08069 1367 aa13.44□□□□□ -0.26
CCL13-202ENST00000577681 FBLN2P98095 1184 aa13.42□□□□□ -0.26
CCL13-202ENST00000577681 CUL7Q14999 1698 aa13.4□□□□□ -0.26
CCL13-202ENST00000577681 SCAF1Q9H7N4 1312 aaKnown RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms