RNA–Protein interactions for RNA: ENST00000577573.1

LINC02003-201, Transcript of long intergenic non-protein coding RNA 2003, humanhuman

TSL 2 BASIC

Gene LINC02003, Length 1,833 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02003-201ENST00000577573 NISCHQ9Y2I1 1504 aa25.46■■□□□ 1.67
LINC02003-201ENST00000577573 CCDC180Q9P1Z9 1646 aa22.73■■□□□ 1.23
LINC02003-201ENST00000577573 ABCC9O60706 1549 aa22.3■■□□□ 1.16
LINC02003-201ENST00000577573 RB1CC1Q8TDY2 1594 aa21.4■■□□□ 1.02
LINC02003-201ENST00000577573 NACADO15069 1562 aa21.34■■□□□ 1.01
LINC02003-201ENST00000577573 ZCCHC6Q5VYS8 1495 aaKnown RBP21.34■■□□□ 1.01
LINC02003-201ENST00000577573 DCAF8L2P0C7V8 631 aa21.21■□□□□ 0.99
LINC02003-201ENST00000577573 MYO15BQ96JP2 1530 aa21.17■□□□□ 0.98
LINC02003-201ENST00000577573 DCAF1Q9Y4B6 1507 aa21.05■□□□□ 0.96
LINC02003-201ENST00000577573 UNC13AQ9UPW8 1703 aa21.03■□□□□ 0.96
LINC02003-201ENST00000577573 SHROOM4Q9ULL8 1493 aa21.01■□□□□ 0.95
LINC02003-201ENST00000577573 BICRAQ9NZM4 1560 aa20.81■□□□□ 0.92
LINC02003-201ENST00000577573 PABPN1Q86U42 306 aaKnown RBP eCLIP20.78■□□□□ 0.92
LINC02003-201ENST00000577573 SCRIBQ14160 1630 aa20.74■□□□□ 0.91
LINC02003-201ENST00000577573 SUPT5HO00267 1087 aaKnown RBP20.58■□□□□ 0.89
LINC02003-201ENST00000577573 DNAJC5BQ9UF47 199 aa20.54■□□□□ 0.88
LINC02003-201ENST00000577573 EIF4G1Q04637 1599 aaKnown RBP20.25■□□□□ 0.83
LINC02003-201ENST00000577573 CC2D2AQ9P2K1 1620 aa20.19■□□□□ 0.82
LINC02003-201ENST00000577573 CHIC1Q5VXU3 224 aa20.11■□□□□ 0.81
LINC02003-201ENST00000577573 CECR2Q9BXF3 1484 aa20.03■□□□□ 0.8
LINC02003-201ENST00000577573 RSF1Q96T23 1441 aaPredicted RBP19.84■□□□□ 0.77
LINC02003-201ENST00000577573 SMARCA4P51532 1647 aa19.82■□□□□ 0.76
LINC02003-201ENST00000577573 BAZ1AQ9NRL2 1556 aaPredicted RBP19.74■□□□□ 0.75
LINC02003-201ENST00000577573 ATAD2BQ9ULI0 1458 aa19.69■□□□□ 0.74
LINC02003-201ENST00000577573 NCAPD3P42695 1498 aa19.67■□□□□ 0.74
LINC02003-201ENST00000577573 SMARCA2P51531 1590 aa19.66■□□□□ 0.74
LINC02003-201ENST00000577573 MROH2BQ7Z745 1585 aa19.65■□□□□ 0.74
LINC02003-201ENST00000577573 HMGXB3Q12766 1538 aa19.61■□□□□ 0.73
LINC02003-201ENST00000577573 PEG3Q9GZU2 1588 aa19.61■□□□□ 0.73
LINC02003-201ENST00000577573 BAZ1BQ9UIG0 1483 aaKnown RBP19.52■□□□□ 0.72
LINC02003-201ENST00000577573 WIZO95785 1651 aa19.45■□□□□ 0.7
LINC02003-201ENST00000577573 LOC105371045A0A1W2PR82 267 aa19.33■□□□□ 0.69
LINC02003-201ENST00000577573 TRIM41Q8WV44 630 aa19.32■□□□□ 0.68
LINC02003-201ENST00000577573 NESP48681 1621 aa19.29■□□□□ 0.68
LINC02003-201ENST00000577573 HRCP23327 699 aa19.27■□□□□ 0.68
LINC02003-201ENST00000577573 TOP2AP11388 1531 aaKnown RBP19.22■□□□□ 0.67
LINC02003-201ENST00000577573 LAMC3Q9Y6N6 1575 aa19.21■□□□□ 0.67
LINC02003-201ENST00000577573 PCGF6Q9BYE7 350 aa19.2■□□□□ 0.66
LINC02003-201ENST00000577573 ERCC6Q03468 1493 aa19.2■□□□□ 0.66
LINC02003-201ENST00000577573 KIF21AQ7Z4S6 1674 aa19.11■□□□□ 0.65
LINC02003-201ENST00000577573 CADPSQ9ULU8 1353 aa19.08■□□□□ 0.64
LINC02003-201ENST00000577573 TRIM26Q12899 539 aaPredicted RBP19.07■□□□□ 0.64
LINC02003-201ENST00000577573 THOC2Q8NI27 1593 aaKnown RBP19.07■□□□□ 0.64
LINC02003-201ENST00000577573 CUX2O14529 1486 aa19.05■□□□□ 0.64
LINC02003-201ENST00000577573 CCDC88BA6NC98 1476 aa19.02■□□□□ 0.64
LINC02003-201ENST00000577573 PDS5BQ9NTI5 1447 aa19.02■□□□□ 0.64
LINC02003-201ENST00000577573 CFTRP13569 1480 aa18.97■□□□□ 0.63
LINC02003-201ENST00000577573 FAM9AQ8IZU1 332 aaPredicted RBP18.95■□□□□ 0.62
LINC02003-201ENST00000577573 PRDM2Q13029 1718 aa18.93■□□□□ 0.62
LINC02003-201ENST00000577573 FANCD2Q9BXW9 1451 aa18.9■□□□□ 0.62
LINC02003-201ENST00000577573 CEP164Q9UPV0 1460 aa18.89■□□□□ 0.61
LINC02003-201ENST00000577573 MRC2Q9UBG0 1479 aa18.88■□□□□ 0.61
LINC02003-201ENST00000577573 WDR62O43379 1518 aa18.85■□□□□ 0.61
LINC02003-201ENST00000577573 ABCC8Q09428 1581 aa18.82■□□□□ 0.6
LINC02003-201ENST00000577573 EEA1Q15075 1411 aa18.8■□□□□ 0.6
LINC02003-201ENST00000577573 URB2Q14146 1524 aaKnown RBP18.74■□□□□ 0.59
LINC02003-201ENST00000577573 ZEB1P37275 1124 aaPredicted RBP18.72■□□□□ 0.59
LINC02003-201ENST00000577573 WRNQ14191 1432 aaPredicted RBP eCLIP18.65■□□□□ 0.58
LINC02003-201ENST00000577573 SOGA1O94964 1423 aa18.63■□□□□ 0.57
LINC02003-201ENST00000577573 PPARGC1BQ86YN6 1023 aaKnown RBP18.63■□□□□ 0.57
LINC02003-201ENST00000577573 TNIKQ9UKE5 1360 aa18.62■□□□□ 0.57
LINC02003-201ENST00000577573 EHMT2Q96KQ7 1210 aa18.61■□□□□ 0.57
LINC02003-201ENST00000577573 TOPBP1Q92547 1522 aa18.6■□□□□ 0.57
LINC02003-201ENST00000577573 CSRNP3Q8WYN3 585 aa18.59■□□□□ 0.57
LINC02003-201ENST00000577573 DNMBPQ6XZF7 1577 aa18.58■□□□□ 0.56
LINC02003-201ENST00000577573 CEP162Q5TB80 1403 aa18.55■□□□□ 0.56
LINC02003-201ENST00000577573 GOLGA3Q08378 1498 aa18.53■□□□□ 0.56
LINC02003-201ENST00000577573 SYNJ1O43426 1573 aa18.53■□□□□ 0.56
LINC02003-201ENST00000577573 DNAJC5Q9H3Z4 198 aa18.53■□□□□ 0.56
LINC02003-201ENST00000577573 RUSC2Q8N2Y8 1516 aa18.5■□□□□ 0.55
LINC02003-201ENST00000577573 KIF21BO75037 1637 aa18.49■□□□□ 0.55
LINC02003-201ENST00000577573 IFT140Q96RY7 1462 aa18.48■□□□□ 0.55
LINC02003-201ENST00000577573 ZNF608Q9ULD9 1512 aaPredicted RBP18.45■□□□□ 0.54
LINC02003-201ENST00000577573 CUX1P39880 1505 aa18.44■□□□□ 0.54
LINC02003-201ENST00000577573 POLA1P09884 1462 aaPredicted RBP18.44■□□□□ 0.54
LINC02003-201ENST00000577573 TARBP1Q13395 1621 aaKnown RBP18.43■□□□□ 0.54
LINC02003-201ENST00000577573 TOP2BQ02880 1626 aa18.43■□□□□ 0.54
LINC02003-201ENST00000577573 BIVM-ERCC5R4GMW8 1640 aa18.41■□□□□ 0.54
LINC02003-201ENST00000577573 EIF4G3O43432 1585 aaKnown RBP18.4■□□□□ 0.54
LINC02003-201ENST00000577573 UBTFP17480 764 aaKnown RBP18.39■□□□□ 0.53
LINC02003-201ENST00000577573 FGD5Q6ZNL6 1462 aa18.38■□□□□ 0.53
LINC02003-201ENST00000577573 RAD54L2Q9Y4B4 1467 aa18.35■□□□□ 0.53
LINC02003-201ENST00000577573 WDR97A6NE52 1622 aa18.31■□□□□ 0.52
LINC02003-201ENST00000577573 AQRO60306 1485 aaKnown RBP eCLIP18.3■□□□□ 0.52
LINC02003-201ENST00000577573 CLIP1P30622 1438 aa18.25■□□□□ 0.51
LINC02003-201ENST00000577573 ERICH3Q5RHP9 1530 aa18.25■□□□□ 0.51
LINC02003-201ENST00000577573 TDRD9Q8NDG6 1382 aaKnown RBP18.22■□□□□ 0.51
LINC02003-201ENST00000577573 RAPGEF2Q9Y4G8 1499 aa18.22■□□□□ 0.51
LINC02003-201ENST00000577573 CHD1O14646 1710 aa18.21■□□□□ 0.51
LINC02003-201ENST00000577573 VPS8Q8N3P4 1428 aa18.21■□□□□ 0.51
LINC02003-201ENST00000577573 PRXQ9BXM0 1461 aa18.18■□□□□ 0.5
LINC02003-201ENST00000577573 ABCA10Q8WWZ4 1543 aa18.18■□□□□ 0.5
LINC02003-201ENST00000577573 PBRM1Q86U86 1689 aa18.18■□□□□ 0.5
LINC02003-201ENST00000577573 CCER1Q8TC90 406 aaPredicted RBP18.17■□□□□ 0.5
LINC02003-201ENST00000577573 ABCA5Q8WWZ7 1642 aa18.17■□□□□ 0.5
LINC02003-201ENST00000577573 OSCARQ8IYS5 282 aa18.16■□□□□ 0.5
LINC02003-201ENST00000577573 SNAPC4Q5SXM2 1469 aa18.15■□□□□ 0.5
LINC02003-201ENST00000577573 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.14■□□□□ 0.49
LINC02003-201ENST00000577573 KIF27Q86VH2 1401 aa18.13■□□□□ 0.49
LINC02003-201ENST00000577573 GRIN2BQ13224 1484 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms