RNA–Protein interactions for RNA: ENST00000577447.1

GSDMA-202, Transcript of gasdermin A, humanhuman

TSL 4

Gene GSDMA, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMA-202ENST00000577447 NISCHQ9Y2I1 1504 aa27.51■■□□□ 1.99
GSDMA-202ENST00000577447 CCDC180Q9P1Z9 1646 aa24.28■■□□□ 1.48
GSDMA-202ENST00000577447 ABCC9O60706 1549 aa23.7■■□□□ 1.38
GSDMA-202ENST00000577447 ZCCHC6Q5VYS8 1495 aaKnown RBP23.07■■□□□ 1.28
GSDMA-202ENST00000577447 DCAF1Q9Y4B6 1507 aa22.82■■□□□ 1.24
GSDMA-202ENST00000577447 DCAF8L2P0C7V8 631 aa22.7■■□□□ 1.22
GSDMA-202ENST00000577447 MYO15BQ96JP2 1530 aa22.68■■□□□ 1.22
GSDMA-202ENST00000577447 NACADO15069 1562 aa22.63■■□□□ 1.21
GSDMA-202ENST00000577447 RB1CC1Q8TDY2 1594 aa22.55■■□□□ 1.2
GSDMA-202ENST00000577447 DNAJC5BQ9UF47 199 aa22.2■■□□□ 1.14
GSDMA-202ENST00000577447 SCRIBQ14160 1630 aa22.17■■□□□ 1.14
GSDMA-202ENST00000577447 UNC13AQ9UPW8 1703 aa22.13■■□□□ 1.13
GSDMA-202ENST00000577447 SHROOM4Q9ULL8 1493 aa22.11■■□□□ 1.13
GSDMA-202ENST00000577447 PABPN1Q86U42 306 aaKnown RBP eCLIP22.1■■□□□ 1.13
GSDMA-202ENST00000577447 BICRAQ9NZM4 1560 aa21.92■■□□□ 1.1
GSDMA-202ENST00000577447 CC2D2AQ9P2K1 1620 aa21.41■■□□□ 1.02
GSDMA-202ENST00000577447 EIF4G1Q04637 1599 aaKnown RBP21.36■■□□□ 1.01
GSDMA-202ENST00000577447 BAZ1AQ9NRL2 1556 aaPredicted RBP21.35■■□□□ 1.01
GSDMA-202ENST00000577447 CECR2Q9BXF3 1484 aa21.32■■□□□ 1
GSDMA-202ENST00000577447 SMARCA4P51532 1647 aa21.25■□□□□ 0.99
GSDMA-202ENST00000577447 MROH2BQ7Z745 1585 aa21.18■□□□□ 0.98
GSDMA-202ENST00000577447 RSF1Q96T23 1441 aaPredicted RBP21.16■□□□□ 0.98
GSDMA-202ENST00000577447 SUPT5HO00267 1087 aaKnown RBP21.13■□□□□ 0.97
GSDMA-202ENST00000577447 WIZO95785 1651 aa21.02■□□□□ 0.96
GSDMA-202ENST00000577447 PEG3Q9GZU2 1588 aa21.02■□□□□ 0.95
GSDMA-202ENST00000577447 SMARCA2P51531 1590 aa21.01■□□□□ 0.95
GSDMA-202ENST00000577447 ATAD2BQ9ULI0 1458 aa20.91■□□□□ 0.94
GSDMA-202ENST00000577447 TOP2AP11388 1531 aaKnown RBP20.88■□□□□ 0.93
GSDMA-202ENST00000577447 BAZ1BQ9UIG0 1483 aaKnown RBP20.85■□□□□ 0.93
GSDMA-202ENST00000577447 HMGXB3Q12766 1538 aa20.83■□□□□ 0.93
GSDMA-202ENST00000577447 NCAPD3P42695 1498 aa20.79■□□□□ 0.92
GSDMA-202ENST00000577447 CCDC88BA6NC98 1476 aa20.56■□□□□ 0.88
GSDMA-202ENST00000577447 ERCC6Q03468 1493 aa20.43■□□□□ 0.86
GSDMA-202ENST00000577447 NESP48681 1621 aa20.4■□□□□ 0.86
GSDMA-202ENST00000577447 CUX2O14529 1486 aa20.34■□□□□ 0.85
GSDMA-202ENST00000577447 PRDM2Q13029 1718 aa20.3■□□□□ 0.84
GSDMA-202ENST00000577447 DNAJC5Q9H3Z4 198 aa20.28■□□□□ 0.84
GSDMA-202ENST00000577447 CFTRP13569 1480 aa20.25■□□□□ 0.83
GSDMA-202ENST00000577447 LAMC3Q9Y6N6 1575 aa20.24■□□□□ 0.83
GSDMA-202ENST00000577447 CADPSQ9ULU8 1353 aa20.22■□□□□ 0.83
GSDMA-202ENST00000577447 THOC2Q8NI27 1593 aaKnown RBP20.15■□□□□ 0.82
GSDMA-202ENST00000577447 KIF21AQ7Z4S6 1674 aa20.15■□□□□ 0.82
GSDMA-202ENST00000577447 PDS5BQ9NTI5 1447 aa20.08■□□□□ 0.8
GSDMA-202ENST00000577447 CHIC1Q5VXU3 224 aa20.05■□□□□ 0.8
GSDMA-202ENST00000577447 ABCC8Q09428 1581 aa20.04■□□□□ 0.8
GSDMA-202ENST00000577447 FANCD2Q9BXW9 1451 aa20.04■□□□□ 0.8
GSDMA-202ENST00000577447 WRNQ14191 1432 aaPredicted RBP eCLIP20■□□□□ 0.79
GSDMA-202ENST00000577447 CEP164Q9UPV0 1460 aa19.99■□□□□ 0.79
GSDMA-202ENST00000577447 TRIM41Q8WV44 630 aa19.96■□□□□ 0.79
GSDMA-202ENST00000577447 BIVM-ERCC5R4GMW8 1640 aa19.92■□□□□ 0.78
GSDMA-202ENST00000577447 MRC2Q9UBG0 1479 aa19.92■□□□□ 0.78
GSDMA-202ENST00000577447 SYNJ1O43426 1573 aa19.91■□□□□ 0.78
GSDMA-202ENST00000577447 TOP2BQ02880 1626 aa19.91■□□□□ 0.78
GSDMA-202ENST00000577447 WDR62O43379 1518 aa19.86■□□□□ 0.77
GSDMA-202ENST00000577447 DNMBPQ6XZF7 1577 aa19.86■□□□□ 0.77
GSDMA-202ENST00000577447 CUX1P39880 1505 aa19.86■□□□□ 0.77
GSDMA-202ENST00000577447 TOPBP1Q92547 1522 aa19.78■□□□□ 0.76
GSDMA-202ENST00000577447 URB2Q14146 1524 aaKnown RBP19.76■□□□□ 0.75
GSDMA-202ENST00000577447 FGD5Q6ZNL6 1462 aa19.72■□□□□ 0.75
GSDMA-202ENST00000577447 EEA1Q15075 1411 aa19.65■□□□□ 0.74
GSDMA-202ENST00000577447 POLA1P09884 1462 aaPredicted RBP19.65■□□□□ 0.74
GSDMA-202ENST00000577447 SOGA1O94964 1423 aa19.57■□□□□ 0.72
GSDMA-202ENST00000577447 WDR97A6NE52 1622 aa19.56■□□□□ 0.72
GSDMA-202ENST00000577447 KIF27Q86VH2 1401 aa19.56■□□□□ 0.72
GSDMA-202ENST00000577447 ABCA10Q8WWZ4 1543 aa19.55■□□□□ 0.72
GSDMA-202ENST00000577447 IFT140Q96RY7 1462 aa19.53■□□□□ 0.72
GSDMA-202ENST00000577447 RAD54L2Q9Y4B4 1467 aa19.52■□□□□ 0.72
GSDMA-202ENST00000577447 TARBP1Q13395 1621 aaKnown RBP19.51■□□□□ 0.71
GSDMA-202ENST00000577447 FAM9AQ8IZU1 332 aaPredicted RBP19.5■□□□□ 0.71
GSDMA-202ENST00000577447 OSCARQ8IYS5 282 aa19.46■□□□□ 0.71
GSDMA-202ENST00000577447 RUSC2Q8N2Y8 1516 aa19.45■□□□□ 0.7
GSDMA-202ENST00000577447 ZNF608Q9ULD9 1512 aaPredicted RBP19.45■□□□□ 0.7
GSDMA-202ENST00000577447 ABCA5Q8WWZ7 1642 aa19.44■□□□□ 0.7
GSDMA-202ENST00000577447 CSRNP3Q8WYN3 585 aa19.41■□□□□ 0.7
GSDMA-202ENST00000577447 GAPVD1Q14C86 1478 aa19.39■□□□□ 0.69
GSDMA-202ENST00000577447 KIF21BO75037 1637 aa19.39■□□□□ 0.69
GSDMA-202ENST00000577447 PBRM1Q86U86 1689 aa19.38■□□□□ 0.69
GSDMA-202ENST00000577447 CUL7Q14999 1698 aa19.37■□□□□ 0.69
GSDMA-202ENST00000577447 EIF4G3O43432 1585 aaKnown RBP19.36■□□□□ 0.69
GSDMA-202ENST00000577447 ERICH3Q5RHP9 1530 aa19.36■□□□□ 0.69
GSDMA-202ENST00000577447 TDRD9Q8NDG6 1382 aaKnown RBP19.34■□□□□ 0.69
GSDMA-202ENST00000577447 GOLGA3Q08378 1498 aa19.33■□□□□ 0.68
GSDMA-202ENST00000577447 GRIN2BQ13224 1484 aa19.3■□□□□ 0.68
GSDMA-202ENST00000577447 AQRO60306 1485 aaKnown RBP eCLIP19.28■□□□□ 0.68
GSDMA-202ENST00000577447 PRXQ9BXM0 1461 aa19.28■□□□□ 0.68
GSDMA-202ENST00000577447 IGF1RP08069 1367 aa19.28■□□□□ 0.68
GSDMA-202ENST00000577447 RAPGEF2Q9Y4G8 1499 aa19.24■□□□□ 0.67
GSDMA-202ENST00000577447 CARMIL1Q5VZK9 1371 aa19.23■□□□□ 0.67
GSDMA-202ENST00000577447 ADAMTS12P58397 1594 aa19.23■□□□□ 0.67
GSDMA-202ENST00000577447 RIMBP3CA6NJZ7 1639 aa19.22■□□□□ 0.67
GSDMA-202ENST00000577447 RIMBP3BA6NNM3 1639 aa19.22■□□□□ 0.67
GSDMA-202ENST00000577447 RIMBP3Q9UFD9 1639 aa19.22■□□□□ 0.67
GSDMA-202ENST00000577447 CHD1O14646 1710 aa19.22■□□□□ 0.67
GSDMA-202ENST00000577447 MAGI1Q96QZ7 1491 aaPredicted RBP19.21■□□□□ 0.67
GSDMA-202ENST00000577447 LOC105371045A0A1W2PR82 267 aa19.19■□□□□ 0.66
GSDMA-202ENST00000577447 EHMT2Q96KQ7 1210 aa19.19■□□□□ 0.66
GSDMA-202ENST00000577447 FHAD1B1AJZ9 1412 aa19.18■□□□□ 0.66
GSDMA-202ENST00000577447 SNAPC4Q5SXM2 1469 aa19.18■□□□□ 0.66
GSDMA-202ENST00000577447 UBTFP17480 764 aaKnown RBP19.17■□□□□ 0.66
GSDMA-202ENST00000577447 FBLN2P98095 1184 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms