RNA–Protein interactions for RNA: ENST00000577326.1

TRIM16-208, Transcript of tripartite motif containing 16, humanhuman

TSL 2

Gene TRIM16, Length 920 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM16-208ENST00000577326 NISCHQ9Y2I1 1504 aa22.76■■□□□ 1.23
TRIM16-208ENST00000577326 CCDC180Q9P1Z9 1646 aa19.67■□□□□ 0.74
TRIM16-208ENST00000577326 ZCCHC6Q5VYS8 1495 aaKnown RBP19.21■□□□□ 0.67
TRIM16-208ENST00000577326 AEBP2Q6ZN18 517 aaPredicted RBP19.19■□□□□ 0.66
TRIM16-208ENST00000577326 DCAF1Q9Y4B6 1507 aa18.94■□□□□ 0.62
TRIM16-208ENST00000577326 SHROOM4Q9ULL8 1493 aa18.69■□□□□ 0.58
TRIM16-208ENST00000577326 MYO15BQ96JP2 1530 aa18.56■□□□□ 0.56
TRIM16-208ENST00000577326 DCAF8L2P0C7V8 631 aa18.47■□□□□ 0.55
TRIM16-208ENST00000577326 CHIC1Q5VXU3 224 aa18.35■□□□□ 0.53
TRIM16-208ENST00000577326 SUPT5HO00267 1087 aaKnown RBP18.29■□□□□ 0.52
TRIM16-208ENST00000577326 NACADO15069 1562 aa18.21■□□□□ 0.51
TRIM16-208ENST00000577326 ABCC9O60706 1549 aa18.05■□□□□ 0.48
TRIM16-208ENST00000577326 SCRIBQ14160 1630 aa17.98■□□□□ 0.47
TRIM16-208ENST00000577326 RB1CC1Q8TDY2 1594 aa17.9■□□□□ 0.46
TRIM16-208ENST00000577326 RSF1Q96T23 1441 aaPredicted RBP17.82■□□□□ 0.44
TRIM16-208ENST00000577326 BAZ1AQ9NRL2 1556 aaPredicted RBP17.55■□□□□ 0.4
TRIM16-208ENST00000577326 CECR2Q9BXF3 1484 aa17.54■□□□□ 0.4
TRIM16-208ENST00000577326 MROH2BQ7Z745 1585 aa17.53■□□□□ 0.4
TRIM16-208ENST00000577326 UNC13AQ9UPW8 1703 aa17.46■□□□□ 0.39
TRIM16-208ENST00000577326 WIZO95785 1651 aa17.39■□□□□ 0.37
TRIM16-208ENST00000577326 SMARCA4P51532 1647 aa17.36■□□□□ 0.37
TRIM16-208ENST00000577326 TOP2AP11388 1531 aaKnown RBP17.31■□□□□ 0.36
TRIM16-208ENST00000577326 BICRAQ9NZM4 1560 aa17.29■□□□□ 0.36
TRIM16-208ENST00000577326 TRIM41Q8WV44 630 aa17.28■□□□□ 0.36
TRIM16-208ENST00000577326 PEG3Q9GZU2 1588 aa17.22■□□□□ 0.35
TRIM16-208ENST00000577326 EIF4G1Q04637 1599 aaKnown RBP17.19■□□□□ 0.34
TRIM16-208ENST00000577326 SMARCA2P51531 1590 aa17.12■□□□□ 0.33
TRIM16-208ENST00000577326 CCDC88BA6NC98 1476 aa17.12■□□□□ 0.33
TRIM16-208ENST00000577326 LOC105371045A0A1W2PR82 267 aa17.11■□□□□ 0.33
TRIM16-208ENST00000577326 PABPN1Q86U42 306 aaKnown RBP eCLIP17.02■□□□□ 0.32
TRIM16-208ENST00000577326 ATAD2BQ9ULI0 1458 aa16.97■□□□□ 0.31
TRIM16-208ENST00000577326 EEA1Q15075 1411 aa16.9■□□□□ 0.3
TRIM16-208ENST00000577326 HRCP23327 699 aa16.9■□□□□ 0.3
TRIM16-208ENST00000577326 TRIM26Q12899 539 aaPredicted RBP16.9■□□□□ 0.3
TRIM16-208ENST00000577326 BAZ1BQ9UIG0 1483 aaKnown RBP16.88■□□□□ 0.29
TRIM16-208ENST00000577326 PCGF6Q9BYE7 350 aa16.88■□□□□ 0.29
TRIM16-208ENST00000577326 ABCC8Q09428 1581 aa16.81■□□□□ 0.28
TRIM16-208ENST00000577326 FAM9AQ8IZU1 332 aaPredicted RBP16.81■□□□□ 0.28
TRIM16-208ENST00000577326 HMGXB3Q12766 1538 aa16.8■□□□□ 0.28
TRIM16-208ENST00000577326 NCAPD3P42695 1498 aa16.8■□□□□ 0.28
TRIM16-208ENST00000577326 WRNQ14191 1432 aaPredicted RBP eCLIP16.76■□□□□ 0.27
TRIM16-208ENST00000577326 TNIKQ9UKE5 1360 aa16.68■□□□□ 0.26
TRIM16-208ENST00000577326 CSRNP3Q8WYN3 585 aa16.67■□□□□ 0.26
TRIM16-208ENST00000577326 SOGA1O94964 1423 aa16.64■□□□□ 0.25
TRIM16-208ENST00000577326 SYNJ1O43426 1573 aa16.61■□□□□ 0.25
TRIM16-208ENST00000577326 GOLGA3Q08378 1498 aa16.6■□□□□ 0.25
TRIM16-208ENST00000577326 TOP2BQ02880 1626 aa16.59■□□□□ 0.25
TRIM16-208ENST00000577326 ZEB1P37275 1124 aaPredicted RBP16.59■□□□□ 0.25
TRIM16-208ENST00000577326 KIF21BO75037 1637 aa16.58■□□□□ 0.24
TRIM16-208ENST00000577326 BIVM-ERCC5R4GMW8 1640 aa16.57■□□□□ 0.24
TRIM16-208ENST00000577326 CEP164Q9UPV0 1460 aa16.56■□□□□ 0.24
TRIM16-208ENST00000577326 CFTRP13569 1480 aa16.54■□□□□ 0.24
TRIM16-208ENST00000577326 CEP162Q5TB80 1403 aa16.53■□□□□ 0.24
TRIM16-208ENST00000577326 RUSC2Q8N2Y8 1516 aa16.51■□□□□ 0.23
TRIM16-208ENST00000577326 PRDM2Q13029 1718 aa16.48■□□□□ 0.23
TRIM16-208ENST00000577326 UBTFP17480 764 aaKnown RBP16.44■□□□□ 0.22
TRIM16-208ENST00000577326 EHMT2Q96KQ7 1210 aa16.44■□□□□ 0.22
TRIM16-208ENST00000577326 ERICH3Q5RHP9 1530 aa16.4■□□□□ 0.22
TRIM16-208ENST00000577326 CUX1P39880 1505 aa16.37■□□□□ 0.21
TRIM16-208ENST00000577326 CADPSQ9ULU8 1353 aa16.37■□□□□ 0.21
TRIM16-208ENST00000577326 PRXQ9BXM0 1461 aa16.34■□□□□ 0.21
TRIM16-208ENST00000577326 CC2D2AQ9P2K1 1620 aa16.34■□□□□ 0.21
TRIM16-208ENST00000577326 KIF27Q86VH2 1401 aa16.33■□□□□ 0.2
TRIM16-208ENST00000577326 CLIP1P30622 1438 aa16.32■□□□□ 0.2
TRIM16-208ENST00000577326 RAPGEF2Q9Y4G8 1499 aa16.29■□□□□ 0.2
TRIM16-208ENST00000577326 VPS8Q8N3P4 1428 aa16.28■□□□□ 0.2
TRIM16-208ENST00000577326 SENP3Q9H4L4 574 aaPredicted RBP16.24■□□□□ 0.19
TRIM16-208ENST00000577326 PPARGC1BQ86YN6 1023 aaKnown RBP16.22■□□□□ 0.19
TRIM16-208ENST00000577326 APLP2Q06481 763 aa16.15■□□□□ 0.18
TRIM16-208ENST00000577326 FANCD2Q9BXW9 1451 aa16.15■□□□□ 0.18
TRIM16-208ENST00000577326 PHF23Q9BUL5 403 aaPredicted RBP16.14■□□□□ 0.17
TRIM16-208ENST00000577326 LAMC3Q9Y6N6 1575 aa16.13■□□□□ 0.17
TRIM16-208ENST00000577326 DNMBPQ6XZF7 1577 aa16.13■□□□□ 0.17
TRIM16-208ENST00000577326 IGF1RP08069 1367 aa16.12■□□□□ 0.17
TRIM16-208ENST00000577326 FGD5Q6ZNL6 1462 aa16.11■□□□□ 0.17
TRIM16-208ENST00000577326 CUX2O14529 1486 aa16.1■□□□□ 0.17
TRIM16-208ENST00000577326 CCER1Q8TC90 406 aaPredicted RBP16.07■□□□□ 0.16
TRIM16-208ENST00000577326 ARAP1Q96P48 1450 aa16.06■□□□□ 0.16
TRIM16-208ENST00000577326 ABCA10Q8WWZ4 1543 aa16.05■□□□□ 0.16
TRIM16-208ENST00000577326 CARMIL1Q5VZK9 1371 aa16.04■□□□□ 0.16
TRIM16-208ENST00000577326 TOPBP1Q92547 1522 aa16.03■□□□□ 0.16
TRIM16-208ENST00000577326 MAP3K1Q13233 1512 aa16.02■□□□□ 0.15
TRIM16-208ENST00000577326 PDS5BQ9NTI5 1447 aa16■□□□□ 0.15
TRIM16-208ENST00000577326 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.99■□□□□ 0.15
TRIM16-208ENST00000577326 ARHGAP35Q9NRY4 1499 aa15.98■□□□□ 0.15
TRIM16-208ENST00000577326 CUL7Q14999 1698 aa15.98■□□□□ 0.15
TRIM16-208ENST00000577326 POLA1P09884 1462 aaPredicted RBP15.97■□□□□ 0.15
TRIM16-208ENST00000577326 WDR97A6NE52 1622 aa15.92■□□□□ 0.14
TRIM16-208ENST00000577326 NESP48681 1621 aa15.92■□□□□ 0.14
TRIM16-208ENST00000577326 FHAD1B1AJZ9 1412 aa15.91■□□□□ 0.14
TRIM16-208ENST00000577326 RRBP1Q9P2E9 1410 aaKnown RBP15.9■□□□□ 0.14
TRIM16-208ENST00000577326 CLSPNQ9HAW4 1339 aa15.9■□□□□ 0.14
TRIM16-208ENST00000577326 EFCAB5A4FU69 1503 aa15.89■□□□□ 0.13
TRIM16-208ENST00000577326 TTBK1Q5TCY1 1321 aaPredicted RBP15.89■□□□□ 0.13
TRIM16-208ENST00000577326 URB2Q14146 1524 aaKnown RBP15.89■□□□□ 0.13
TRIM16-208ENST00000577326 RAD54L2Q9Y4B4 1467 aa15.87■□□□□ 0.13
TRIM16-208ENST00000577326 AQRO60306 1485 aaKnown RBP eCLIP15.85■□□□□ 0.13
TRIM16-208ENST00000577326 RANGAP1P46060 587 aaPredicted RBP15.85■□□□□ 0.13
TRIM16-208ENST00000577326 ABCA5Q8WWZ7 1642 aa15.85■□□□□ 0.13
TRIM16-208ENST00000577326 TIAM1Q13009 1591 aa15.83■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms