RNA–Protein interactions for RNA: ENST00000576359.1

RAB40B-211, Transcript of RAB40B, member RAS oncogene family, humanhuman

Gene RAB40B, Length 2,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-211ENST00000576359 NISCHQ9Y2I1 1504 aa30.21■■■□□ 2.43
RAB40B-211ENST00000576359 CCDC180Q9P1Z9 1646 aa25.92■■□□□ 1.74
RAB40B-211ENST00000576359 ZCCHC6Q5VYS8 1495 aaKnown RBP25.52■■□□□ 1.68
RAB40B-211ENST00000576359 SHROOM4Q9ULL8 1493 aa25.35■■□□□ 1.65
RAB40B-211ENST00000576359 DCAF8L2P0C7V8 631 aa24.89■■□□□ 1.57
RAB40B-211ENST00000576359 DCAF1Q9Y4B6 1507 aa24.86■■□□□ 1.57
RAB40B-211ENST00000576359 SUPT5HO00267 1087 aaKnown RBP24.67■■□□□ 1.54
RAB40B-211ENST00000576359 MYO15BQ96JP2 1530 aa24.27■■□□□ 1.48
RAB40B-211ENST00000576359 SCRIBQ14160 1630 aa24.13■■□□□ 1.45
RAB40B-211ENST00000576359 ABCC9O60706 1549 aa24.13■■□□□ 1.45
RAB40B-211ENST00000576359 NACADO15069 1562 aa23.99■■□□□ 1.43
RAB40B-211ENST00000576359 CHIC1Q5VXU3 224 aa23.92■■□□□ 1.42
RAB40B-211ENST00000576359 RSF1Q96T23 1441 aaPredicted RBP23.75■■□□□ 1.39
RAB40B-211ENST00000576359 RB1CC1Q8TDY2 1594 aa23.65■■□□□ 1.38
RAB40B-211ENST00000576359 CECR2Q9BXF3 1484 aa23.55■■□□□ 1.36
RAB40B-211ENST00000576359 MROH2BQ7Z745 1585 aa23.46■■□□□ 1.35
RAB40B-211ENST00000576359 UNC13AQ9UPW8 1703 aa23.35■■□□□ 1.33
RAB40B-211ENST00000576359 WIZO95785 1651 aa23.32■■□□□ 1.32
RAB40B-211ENST00000576359 BAZ1AQ9NRL2 1556 aaPredicted RBP23.23■■□□□ 1.31
RAB40B-211ENST00000576359 LOC105371045A0A1W2PR82 267 aa23.14■■□□□ 1.29
RAB40B-211ENST00000576359 SMARCA4P51532 1647 aa23.09■■□□□ 1.29
RAB40B-211ENST00000576359 BICRAQ9NZM4 1560 aa23.05■■□□□ 1.28
RAB40B-211ENST00000576359 TRIM41Q8WV44 630 aa23.04■■□□□ 1.28
RAB40B-211ENST00000576359 TOP2AP11388 1531 aaKnown RBP22.97■■□□□ 1.27
RAB40B-211ENST00000576359 EIF4G1Q04637 1599 aaKnown RBP22.95■■□□□ 1.26
RAB40B-211ENST00000576359 PABPN1Q86U42 306 aaKnown RBP eCLIP22.95■■□□□ 1.26
RAB40B-211ENST00000576359 SMARCA2P51531 1590 aa22.83■■□□□ 1.25
RAB40B-211ENST00000576359 CCDC88BA6NC98 1476 aa22.83■■□□□ 1.24
RAB40B-211ENST00000576359 PCGF6Q9BYE7 350 aa22.8■■□□□ 1.24
RAB40B-211ENST00000576359 FAM9AQ8IZU1 332 aaPredicted RBP22.78■■□□□ 1.24
RAB40B-211ENST00000576359 PEG3Q9GZU2 1588 aa22.72■■□□□ 1.23
RAB40B-211ENST00000576359 HRCP23327 699 aa22.71■■□□□ 1.23
RAB40B-211ENST00000576359 ABCC8Q09428 1581 aa22.65■■□□□ 1.22
RAB40B-211ENST00000576359 ATAD2BQ9ULI0 1458 aa22.55■■□□□ 1.2
RAB40B-211ENST00000576359 EHMT2Q96KQ7 1210 aa22.55■■□□□ 1.2
RAB40B-211ENST00000576359 TRIM26Q12899 539 aaPredicted RBP22.46■■□□□ 1.19
RAB40B-211ENST00000576359 BAZ1BQ9UIG0 1483 aaKnown RBP22.45■■□□□ 1.18
RAB40B-211ENST00000576359 SOGA1O94964 1423 aa22.35■■□□□ 1.17
RAB40B-211ENST00000576359 WRNQ14191 1432 aaPredicted RBP eCLIP22.3■■□□□ 1.16
RAB40B-211ENST00000576359 RUSC2Q8N2Y8 1516 aa22.27■■□□□ 1.15
RAB40B-211ENST00000576359 SYNJ1O43426 1573 aa22.25■■□□□ 1.15
RAB40B-211ENST00000576359 PPARGC1BQ86YN6 1023 aaKnown RBP22.22■■□□□ 1.15
RAB40B-211ENST00000576359 EEA1Q15075 1411 aa22.22■■□□□ 1.15
RAB40B-211ENST00000576359 HMGXB3Q12766 1538 aa22.19■■□□□ 1.14
RAB40B-211ENST00000576359 NCAPD3P42695 1498 aa22.18■■□□□ 1.14
RAB40B-211ENST00000576359 CSRNP3Q8WYN3 585 aa22.15■■□□□ 1.14
RAB40B-211ENST00000576359 TNIKQ9UKE5 1360 aa22.1■■□□□ 1.13
RAB40B-211ENST00000576359 CEP162Q5TB80 1403 aa22.09■■□□□ 1.13
RAB40B-211ENST00000576359 GOLGA3Q08378 1498 aa22.03■■□□□ 1.12
RAB40B-211ENST00000576359 TOP2BQ02880 1626 aa22.02■■□□□ 1.12
RAB40B-211ENST00000576359 BIVM-ERCC5R4GMW8 1640 aa21.98■■□□□ 1.11
RAB40B-211ENST00000576359 KIF21BO75037 1637 aa21.98■■□□□ 1.11
RAB40B-211ENST00000576359 UBTFP17480 764 aaKnown RBP21.97■■□□□ 1.11
RAB40B-211ENST00000576359 CEP164Q9UPV0 1460 aa21.95■■□□□ 1.1
RAB40B-211ENST00000576359 CFTRP13569 1480 aa21.91■■□□□ 1.1
RAB40B-211ENST00000576359 ZEB1P37275 1124 aaPredicted RBP21.89■■□□□ 1.1
RAB40B-211ENST00000576359 CUX1P39880 1505 aa21.87■■□□□ 1.09
RAB40B-211ENST00000576359 RAPGEF2Q9Y4G8 1499 aa21.83■■□□□ 1.09
RAB40B-211ENST00000576359 PRDM2Q13029 1718 aa21.8■■□□□ 1.08
RAB40B-211ENST00000576359 CC2D2AQ9P2K1 1620 aa21.79■■□□□ 1.08
RAB40B-211ENST00000576359 TTBK1Q5TCY1 1321 aaPredicted RBP21.74■■□□□ 1.07
RAB40B-211ENST00000576359 CLIP1P30622 1438 aa21.74■■□□□ 1.07
RAB40B-211ENST00000576359 PRXQ9BXM0 1461 aa21.7■■□□□ 1.06
RAB40B-211ENST00000576359 CADPSQ9ULU8 1353 aa21.69■■□□□ 1.06
RAB40B-211ENST00000576359 ERICH3Q5RHP9 1530 aa21.67■■□□□ 1.06
RAB40B-211ENST00000576359 KIF27Q86VH2 1401 aa21.63■■□□□ 1.05
RAB40B-211ENST00000576359 VPS8Q8N3P4 1428 aa21.63■■□□□ 1.05
RAB40B-211ENST00000576359 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.59■■□□□ 1.05
RAB40B-211ENST00000576359 RANGAP1P46060 587 aaPredicted RBP21.56■■□□□ 1.04
RAB40B-211ENST00000576359 FGD5Q6ZNL6 1462 aa21.51■■□□□ 1.03
RAB40B-211ENST00000576359 CCER1Q8TC90 406 aaPredicted RBP21.5■■□□□ 1.03
RAB40B-211ENST00000576359 CUX2O14529 1486 aa21.49■■□□□ 1.03
RAB40B-211ENST00000576359 ARAP1Q96P48 1450 aa21.49■■□□□ 1.03
RAB40B-211ENST00000576359 FANCD2Q9BXW9 1451 aa21.49■■□□□ 1.03
RAB40B-211ENST00000576359 IGF1RP08069 1367 aa21.44■■□□□ 1.02
RAB40B-211ENST00000576359 NESP48681 1621 aa21.43■■□□□ 1.02
RAB40B-211ENST00000576359 APLP2Q06481 763 aa21.38■■□□□ 1.01
RAB40B-211ENST00000576359 DNMBPQ6XZF7 1577 aa21.38■■□□□ 1.01
RAB40B-211ENST00000576359 ARHGAP35Q9NRY4 1499 aa21.35■■□□□ 1.01
RAB40B-211ENST00000576359 TOPBP1Q92547 1522 aa21.34■■□□□ 1.01
RAB40B-211ENST00000576359 CARMIL1Q5VZK9 1371 aa21.32■■□□□ 1
RAB40B-211ENST00000576359 RAD54L2Q9Y4B4 1467 aa21.3■■□□□ 1
RAB40B-211ENST00000576359 LAMC3Q9Y6N6 1575 aa21.3■■□□□ 1
RAB40B-211ENST00000576359 POLA1P09884 1462 aaPredicted RBP21.3■■□□□ 1
RAB40B-211ENST00000576359 HNRNPUL2Q1KMD3 747 aaKnown RBP21.28■■□□□ 1
RAB40B-211ENST00000576359 ABCA10Q8WWZ4 1543 aa21.27■■□□□ 1
RAB40B-211ENST00000576359 DNAJC5BQ9UF47 199 aa21.26■□□□□ 0.99
RAB40B-211ENST00000576359 KANK4Q5T7N3 995 aaPredicted RBP21.25■□□□□ 0.99
RAB40B-211ENST00000576359 URB2Q14146 1524 aaKnown RBP21.23■□□□□ 0.99
RAB40B-211ENST00000576359 WDR97A6NE52 1622 aa21.17■□□□□ 0.98
RAB40B-211ENST00000576359 CUL7Q14999 1698 aa21.12■□□□□ 0.97
RAB40B-211ENST00000576359 KIF21AQ7Z4S6 1674 aa21.12■□□□□ 0.97
RAB40B-211ENST00000576359 PDS5BQ9NTI5 1447 aa21.12■□□□□ 0.97
RAB40B-211ENST00000576359 RRBP1Q9P2E9 1410 aaKnown RBP21.1■□□□□ 0.97
RAB40B-211ENST00000576359 TIAM1Q13009 1591 aa21.07■□□□□ 0.96
RAB40B-211ENST00000576359 ABCA5Q8WWZ7 1642 aa21.07■□□□□ 0.96
RAB40B-211ENST00000576359 MAP3K1Q13233 1512 aa21.05■□□□□ 0.96
RAB40B-211ENST00000576359 CTTNBP2Q8WZ74 1663 aa21.04■□□□□ 0.96
RAB40B-211ENST00000576359 TDRD9Q8NDG6 1382 aaKnown RBP21.02■□□□□ 0.96
RAB40B-211ENST00000576359 PCF11O94913 1555 aaKnown RBP21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 195.1 ms