RNA–Protein interactions for RNA: ENST00000576148.1

RAB40B-210, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40B, Length 343 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-210ENST00000576148 NISCHQ9Y2I1 1504 aa18.98■□□□□ 0.63
RAB40B-210ENST00000576148 ABCC9O60706 1549 aa18.28■□□□□ 0.52
RAB40B-210ENST00000576148 DNAJC5BQ9UF47 199 aa17.96■□□□□ 0.47
RAB40B-210ENST00000576148 CCDC180Q9P1Z9 1646 aa17.32■□□□□ 0.36
RAB40B-210ENST00000576148 DNAJC5Q9H3Z4 198 aa17.16■□□□□ 0.34
RAB40B-210ENST00000576148 RB1CC1Q8TDY2 1594 aa16.98■□□□□ 0.31
RAB40B-210ENST00000576148 PABPN1Q86U42 306 aaKnown RBP eCLIP16.95■□□□□ 0.3
RAB40B-210ENST00000576148 NACADO15069 1562 aa16.67■□□□□ 0.26
RAB40B-210ENST00000576148 CECR2Q9BXF3 1484 aa16.57■□□□□ 0.24
RAB40B-210ENST00000576148 DCAF8L2P0C7V8 631 aa16.56■□□□□ 0.24
RAB40B-210ENST00000576148 BICRAQ9NZM4 1560 aa16.47■□□□□ 0.23
RAB40B-210ENST00000576148 UNC13AQ9UPW8 1703 aa16.45■□□□□ 0.22
RAB40B-210ENST00000576148 CC2D2AQ9P2K1 1620 aa16.42■□□□□ 0.22
RAB40B-210ENST00000576148 SHROOM4Q9ULL8 1493 aa16.21■□□□□ 0.19
RAB40B-210ENST00000576148 EIF4G1Q04637 1599 aaKnown RBP16.17■□□□□ 0.18
RAB40B-210ENST00000576148 MYO15BQ96JP2 1530 aa16.14■□□□□ 0.18
RAB40B-210ENST00000576148 CUX2O14529 1486 aa16.11■□□□□ 0.17
RAB40B-210ENST00000576148 TRIM41Q8WV44 630 aa16.08■□□□□ 0.16
RAB40B-210ENST00000576148 ERCC6Q03468 1493 aa15.88■□□□□ 0.13
RAB40B-210ENST00000576148 SCRIBQ14160 1630 aa15.8■□□□□ 0.12
RAB40B-210ENST00000576148 DCAF1Q9Y4B6 1507 aa15.61■□□□□ 0.09
RAB40B-210ENST00000576148 ZCCHC6Q5VYS8 1495 aaKnown RBP15.52■□□□□ 0.07
RAB40B-210ENST00000576148 NCAPD3P42695 1498 aa15.44■□□□□ 0.06
RAB40B-210ENST00000576148 NESP48681 1621 aa15.43■□□□□ 0.06
RAB40B-210ENST00000576148 AEBP2Q6ZN18 517 aaPredicted RBP15.39■□□□□ 0.05
RAB40B-210ENST00000576148 THOC2Q8NI27 1593 aaKnown RBP15.38■□□□□ 0.05
RAB40B-210ENST00000576148 OSCARQ8IYS5 282 aa15.33■□□□□ 0.04
RAB40B-210ENST00000576148 SMARCA2P51531 1590 aa15.27■□□□□ 0.03
RAB40B-210ENST00000576148 ATAD2BQ9ULI0 1458 aa15.25■□□□□ 0.03
RAB40B-210ENST00000576148 PDS5BQ9NTI5 1447 aa15.2■□□□□ 0.02
RAB40B-210ENST00000576148 BAZ1AQ9NRL2 1556 aaPredicted RBP15.19■□□□□ 0.02
RAB40B-210ENST00000576148 HMGXB3Q12766 1538 aa15.17■□□□□ 0.02
RAB40B-210ENST00000576148 LAMC3Q9Y6N6 1575 aa15.17■□□□□ 0.02
RAB40B-210ENST00000576148 TRHP20396 242 aaPredicted RBP15.17■□□□□ 0.02
RAB40B-210ENST00000576148 KIF21AQ7Z4S6 1674 aa15.12■□□□□ 0.01
RAB40B-210ENST00000576148 MRC2Q9UBG0 1479 aa15.08■□□□□ 0
RAB40B-210ENST00000576148 RIMBP3CA6NJZ7 1639 aa15.07■□□□□ 0
RAB40B-210ENST00000576148 RIMBP3BA6NNM3 1639 aa15.07■□□□□ 0
RAB40B-210ENST00000576148 RIMBP3Q9UFD9 1639 aa15.07■□□□□ 0
RAB40B-210ENST00000576148 BAZ1BQ9UIG0 1483 aaKnown RBP15.06■□□□□ 0
RAB40B-210ENST00000576148 CYB5RLQ6IPT4 315 aa15.03■□□□□ -0
RAB40B-210ENST00000576148 WDR62O43379 1518 aa15.02■□□□□ -0
RAB40B-210ENST00000576148 ARHGEF11O15085 1522 aa14.97□□□□□ -0.01
RAB40B-210ENST00000576148 CADPSQ9ULU8 1353 aa14.95□□□□□ -0.02
RAB40B-210ENST00000576148 SMARCA4P51532 1647 aa14.95□□□□□ -0.02
RAB40B-210ENST00000576148 CEP164Q9UPV0 1460 aa14.84□□□□□ -0.03
RAB40B-210ENST00000576148 ILDR1Q86SU0 546 aaPredicted RBP14.83□□□□□ -0.04
RAB40B-210ENST00000576148 PEG3Q9GZU2 1588 aa14.81□□□□□ -0.04
RAB40B-210ENST00000576148 ARAP1Q96P48 1450 aa14.76□□□□□ -0.05
RAB40B-210ENST00000576148 FANCD2Q9BXW9 1451 aa14.75□□□□□ -0.05
RAB40B-210ENST00000576148 URB2Q14146 1524 aaKnown RBP14.65□□□□□ -0.06
RAB40B-210ENST00000576148 RSF1Q96T23 1441 aaPredicted RBP14.64□□□□□ -0.07
RAB40B-210ENST00000576148 ZNF608Q9ULD9 1512 aaPredicted RBP14.62□□□□□ -0.07
RAB40B-210ENST00000576148 MROH2BQ7Z745 1585 aa14.6□□□□□ -0.07
RAB40B-210ENST00000576148 IFT140Q96RY7 1462 aa14.59□□□□□ -0.07
RAB40B-210ENST00000576148 FBLN2P98095 1184 aa14.58□□□□□ -0.08
RAB40B-210ENST00000576148 CFTRP13569 1480 aa14.56□□□□□ -0.08
RAB40B-210ENST00000576148 CHD1O14646 1710 aa14.46□□□□□ -0.1
RAB40B-210ENST00000576148 EIF4G3O43432 1585 aaKnown RBP14.44□□□□□ -0.1
RAB40B-210ENST00000576148 AQRO60306 1485 aaKnown RBP eCLIP14.42□□□□□ -0.1
RAB40B-210ENST00000576148 KDM4FA0A1W2PPD8 638 aa14.36□□□□□ -0.11
RAB40B-210ENST00000576148 TOPBP1Q92547 1522 aa14.36□□□□□ -0.11
RAB40B-210ENST00000576148 WIZO95785 1651 aa14.35□□□□□ -0.11
RAB40B-210ENST00000576148 CHMP7Q8WUX9 453 aaPredicted RBP14.33□□□□□ -0.12
RAB40B-210ENST00000576148 CLASP1Q7Z460 1538 aa14.32□□□□□ -0.12
RAB40B-210ENST00000576148 GAPVD1Q14C86 1478 aa14.31□□□□□ -0.12
RAB40B-210ENST00000576148 ABCC8Q09428 1581 aa14.3□□□□□ -0.12
RAB40B-210ENST00000576148 SYNJ1O43426 1573 aa14.27□□□□□ -0.12
RAB40B-210ENST00000576148 TARBP1Q13395 1621 aaKnown RBP14.24□□□□□ -0.13
RAB40B-210ENST00000576148 TDRD9Q8NDG6 1382 aaKnown RBP14.22□□□□□ -0.13
RAB40B-210ENST00000576148 SNAPC4Q5SXM2 1469 aa14.21□□□□□ -0.13
RAB40B-210ENST00000576148 DNMBPQ6XZF7 1577 aa14.2□□□□□ -0.14
RAB40B-210ENST00000576148 FBXO41Q8TF61 875 aa14.18□□□□□ -0.14
RAB40B-210ENST00000576148 PRDM2Q13029 1718 aa14.17□□□□□ -0.14
RAB40B-210ENST00000576148 POLA1P09884 1462 aaPredicted RBP14.15□□□□□ -0.14
RAB40B-210ENST00000576148 MAGI1Q96QZ7 1491 aaPredicted RBP14.15□□□□□ -0.14
RAB40B-210ENST00000576148 FAM69CQ0P6D2 419 aa14.14□□□□□ -0.15
RAB40B-210ENST00000576148 TOP2AP11388 1531 aaKnown RBP14.14□□□□□ -0.15
RAB40B-210ENST00000576148 SOGA1O94964 1423 aa14.14□□□□□ -0.15
RAB40B-210ENST00000576148 RAD54L2Q9Y4B4 1467 aa14.13□□□□□ -0.15
RAB40B-210ENST00000576148 SYNJ2O15056 1496 aa14.12□□□□□ -0.15
RAB40B-210ENST00000576148 ERCC6L2Q5T890 1561 aa14.11□□□□□ -0.15
RAB40B-210ENST00000576148 KIF13AQ9H1H9 1805 aa14.09□□□□□ -0.15
RAB40B-210ENST00000576148 GRIN2BQ13224 1484 aa14.08□□□□□ -0.16
RAB40B-210ENST00000576148 LMTK3Q96Q04 1460 aa14.05□□□□□ -0.16
RAB40B-210ENST00000576148 HECW2Q9P2P5 1572 aa14.05□□□□□ -0.16
RAB40B-210ENST00000576148 WDR97A6NE52 1622 aa14.04□□□□□ -0.16
RAB40B-210ENST00000576148 KDM6BO15054 1643 aa14.04□□□□□ -0.16
RAB40B-210ENST00000576148 CCDC88BA6NC98 1476 aa14.03□□□□□ -0.16
RAB40B-210ENST00000576148 ABCC10Q5T3U5 1492 aa14.03□□□□□ -0.16
RAB40B-210ENST00000576148 NPM1P06748 294 aaKnown RBP eCLIP14.02□□□□□ -0.17
RAB40B-210ENST00000576148 ADGRL1O94910 1474 aa13.99□□□□□ -0.17
RAB40B-210ENST00000576148 SOCS7O14512 581 aa13.98□□□□□ -0.17
RAB40B-210ENST00000576148 CEP170Q5SW79 1584 aa13.95□□□□□ -0.18
RAB40B-210ENST00000576148 FGD5Q6ZNL6 1462 aa13.93□□□□□ -0.18
RAB40B-210ENST00000576148 DIP2BQ9P265 1576 aa13.9□□□□□ -0.18
RAB40B-210ENST00000576148 MAPKBP1O60336 1514 aa13.89□□□□□ -0.19
RAB40B-210ENST00000576148 GRIN2AQ12879 1464 aa13.87□□□□□ -0.19
RAB40B-210ENST00000576148 ILDR2Q71H61 639 aa13.87□□□□□ -0.19
RAB40B-210ENST00000576148 NUP160Q12769 1436 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms