RNA–Protein interactions for RNA: ENST00000575854.5

TRAP1-214, Transcript of TNF receptor associated protein 1, humanhuman

TSL 3

Gene TRAP1, Length 595 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAP1-214ENST00000575854 NISCHQ9Y2I1 1504 aa29.66■■■□□ 2.34
TRAP1-214ENST00000575854 CCDC180Q9P1Z9 1646 aa26.17■■□□□ 1.78
TRAP1-214ENST00000575854 ABCC9O60706 1549 aa25.42■■□□□ 1.66
TRAP1-214ENST00000575854 ZCCHC6Q5VYS8 1495 aaKnown RBP24.76■■□□□ 1.55
TRAP1-214ENST00000575854 DCAF8L2P0C7V8 631 aa24.75■■□□□ 1.55
TRAP1-214ENST00000575854 NACADO15069 1562 aa24.59■■□□□ 1.53
TRAP1-214ENST00000575854 DCAF1Q9Y4B6 1507 aa24.54■■□□□ 1.52
TRAP1-214ENST00000575854 RB1CC1Q8TDY2 1594 aa24.54■■□□□ 1.52
TRAP1-214ENST00000575854 MYO15BQ96JP2 1530 aa24.53■■□□□ 1.52
TRAP1-214ENST00000575854 SCRIBQ14160 1630 aa23.95■■□□□ 1.42
TRAP1-214ENST00000575854 UNC13AQ9UPW8 1703 aa23.92■■□□□ 1.42
TRAP1-214ENST00000575854 PABPN1Q86U42 306 aaKnown RBP eCLIP23.85■■□□□ 1.41
TRAP1-214ENST00000575854 BICRAQ9NZM4 1560 aa23.78■■□□□ 1.4
TRAP1-214ENST00000575854 SHROOM4Q9ULL8 1493 aa23.66■■□□□ 1.38
TRAP1-214ENST00000575854 EIF4G1Q04637 1599 aaKnown RBP23.14■■□□□ 1.29
TRAP1-214ENST00000575854 DNAJC5BQ9UF47 199 aa23.11■■□□□ 1.29
TRAP1-214ENST00000575854 CECR2Q9BXF3 1484 aa23.1■■□□□ 1.29
TRAP1-214ENST00000575854 CC2D2AQ9P2K1 1620 aa22.97■■□□□ 1.27
TRAP1-214ENST00000575854 BAZ1AQ9NRL2 1556 aaPredicted RBP22.96■■□□□ 1.27
TRAP1-214ENST00000575854 SMARCA4P51532 1647 aa22.92■■□□□ 1.26
TRAP1-214ENST00000575854 MROH2BQ7Z745 1585 aa22.87■■□□□ 1.25
TRAP1-214ENST00000575854 ATAD2BQ9ULI0 1458 aa22.76■■□□□ 1.23
TRAP1-214ENST00000575854 RSF1Q96T23 1441 aaPredicted RBP22.74■■□□□ 1.23
TRAP1-214ENST00000575854 SMARCA2P51531 1590 aa22.74■■□□□ 1.23
TRAP1-214ENST00000575854 NCAPD3P42695 1498 aa22.72■■□□□ 1.23
TRAP1-214ENST00000575854 PEG3Q9GZU2 1588 aa22.69■■□□□ 1.22
TRAP1-214ENST00000575854 WIZO95785 1651 aa22.61■■□□□ 1.21
TRAP1-214ENST00000575854 HMGXB3Q12766 1538 aa22.59■■□□□ 1.21
TRAP1-214ENST00000575854 BAZ1BQ9UIG0 1483 aaKnown RBP22.59■■□□□ 1.21
TRAP1-214ENST00000575854 SUPT5HO00267 1087 aaKnown RBP22.44■■□□□ 1.18
TRAP1-214ENST00000575854 TOP2AP11388 1531 aaKnown RBP22.4■■□□□ 1.18
TRAP1-214ENST00000575854 CCDC88BA6NC98 1476 aa22.16■■□□□ 1.14
TRAP1-214ENST00000575854 NESP48681 1621 aa22.08■■□□□ 1.13
TRAP1-214ENST00000575854 CADPSQ9ULU8 1353 aa22.08■■□□□ 1.12
TRAP1-214ENST00000575854 LAMC3Q9Y6N6 1575 aa22.03■■□□□ 1.12
TRAP1-214ENST00000575854 CFTRP13569 1480 aa22■■□□□ 1.11
TRAP1-214ENST00000575854 PDS5BQ9NTI5 1447 aa21.92■■□□□ 1.1
TRAP1-214ENST00000575854 ERCC6Q03468 1493 aa21.89■■□□□ 1.09
TRAP1-214ENST00000575854 FANCD2Q9BXW9 1451 aa21.82■■□□□ 1.08
TRAP1-214ENST00000575854 KIF21AQ7Z4S6 1674 aa21.75■■□□□ 1.07
TRAP1-214ENST00000575854 CEP164Q9UPV0 1460 aa21.75■■□□□ 1.07
TRAP1-214ENST00000575854 PRDM2Q13029 1718 aa21.75■■□□□ 1.07
TRAP1-214ENST00000575854 MRC2Q9UBG0 1479 aa21.65■■□□□ 1.06
TRAP1-214ENST00000575854 THOC2Q8NI27 1593 aaKnown RBP21.61■■□□□ 1.05
TRAP1-214ENST00000575854 URB2Q14146 1524 aaKnown RBP21.56■■□□□ 1.04
TRAP1-214ENST00000575854 WDR62O43379 1518 aa21.55■■□□□ 1.04
TRAP1-214ENST00000575854 CUX2O14529 1486 aa21.52■■□□□ 1.04
TRAP1-214ENST00000575854 ABCC8Q09428 1581 aa21.5■■□□□ 1.03
TRAP1-214ENST00000575854 TOPBP1Q92547 1522 aa21.49■■□□□ 1.03
TRAP1-214ENST00000575854 DNMBPQ6XZF7 1577 aa21.46■■□□□ 1.03
TRAP1-214ENST00000575854 WRNQ14191 1432 aaPredicted RBP eCLIP21.43■■□□□ 1.022e-6■■□□□ 11.9
TRAP1-214ENST00000575854 CUX1P39880 1505 aa21.43■■□□□ 1.02
TRAP1-214ENST00000575854 POLA1P09884 1462 aaPredicted RBP21.33■■□□□ 1.01
TRAP1-214ENST00000575854 FGD5Q6ZNL6 1462 aa21.32■■□□□ 1
TRAP1-214ENST00000575854 SYNJ1O43426 1573 aa21.31■■□□□ 1
TRAP1-214ENST00000575854 TOP2BQ02880 1626 aa21.31■■□□□ 1
TRAP1-214ENST00000575854 IFT140Q96RY7 1462 aa21.28■■□□□ 1
TRAP1-214ENST00000575854 SOGA1O94964 1423 aa21.28■■□□□ 1
TRAP1-214ENST00000575854 BIVM-ERCC5R4GMW8 1640 aa21.27■■□□□ 1
TRAP1-214ENST00000575854 RAD54L2Q9Y4B4 1467 aa21.24■□□□□ 0.99
TRAP1-214ENST00000575854 TARBP1Q13395 1621 aaKnown RBP21.21■□□□□ 0.99
TRAP1-214ENST00000575854 TRIM41Q8WV44 630 aa21.17■□□□□ 0.98
TRAP1-214ENST00000575854 ZNF608Q9ULD9 1512 aaPredicted RBP21.17■□□□□ 0.98
TRAP1-214ENST00000575854 TDRD9Q8NDG6 1382 aaKnown RBP21.13■□□□□ 0.97
TRAP1-214ENST00000575854 ABCA10Q8WWZ4 1543 aa21.12■□□□□ 0.97
TRAP1-214ENST00000575854 AQRO60306 1485 aaKnown RBP eCLIP21.11■□□□□ 0.973e-12■■■□□ 17
TRAP1-214ENST00000575854 CHIC1Q5VXU3 224 aa21.1■□□□□ 0.97
TRAP1-214ENST00000575854 WDR97A6NE52 1622 aa21.05■□□□□ 0.96
TRAP1-214ENST00000575854 EIF4G3O43432 1585 aaKnown RBP21.05■□□□□ 0.96
TRAP1-214ENST00000575854 GAPVD1Q14C86 1478 aa21.01■□□□□ 0.95
TRAP1-214ENST00000575854 ABCA5Q8WWZ7 1642 aa20.97■□□□□ 0.95
TRAP1-214ENST00000575854 GRIN2BQ13224 1484 aa20.97■□□□□ 0.95
TRAP1-214ENST00000575854 KIF27Q86VH2 1401 aa20.96■□□□□ 0.95
TRAP1-214ENST00000575854 SNAPC4Q5SXM2 1469 aa20.89■□□□□ 0.94
TRAP1-214ENST00000575854 MAGI1Q96QZ7 1491 aaPredicted RBP20.88■□□□□ 0.93
TRAP1-214ENST00000575854 PBRM1Q86U86 1689 aa20.87■□□□□ 0.93
TRAP1-214ENST00000575854 ERICH3Q5RHP9 1530 aa20.87■□□□□ 0.93
TRAP1-214ENST00000575854 IGF1RP08069 1367 aa20.86■□□□□ 0.93
TRAP1-214ENST00000575854 RUSC2Q8N2Y8 1516 aa20.85■□□□□ 0.93
TRAP1-214ENST00000575854 FBLN2P98095 1184 aa20.84■□□□□ 0.93
TRAP1-214ENST00000575854 CHMP7Q8WUX9 453 aaPredicted RBP20.81■□□□□ 0.92
TRAP1-214ENST00000575854 SYNJ2O15056 1496 aa20.8■□□□□ 0.92
TRAP1-214ENST00000575854 FHAD1B1AJZ9 1412 aa20.78■□□□□ 0.92
TRAP1-214ENST00000575854 DNAJC5Q9H3Z4 198 aa20.76■□□□□ 0.91
TRAP1-214ENST00000575854 ADAMTS12P58397 1594 aa20.76■□□□□ 0.91
TRAP1-214ENST00000575854 OSCARQ8IYS5 282 aa20.75■□□□□ 0.91
TRAP1-214ENST00000575854 EEA1Q15075 1411 aa20.74■□□□□ 0.91
TRAP1-214ENST00000575854 CARMIL1Q5VZK9 1371 aa20.73■□□□□ 0.91
TRAP1-214ENST00000575854 FAM9AQ8IZU1 332 aaPredicted RBP20.73■□□□□ 0.91
TRAP1-214ENST00000575854 CSRNP3Q8WYN3 585 aa20.72■□□□□ 0.91
TRAP1-214ENST00000575854 CHD1O14646 1710 aa20.71■□□□□ 0.91
TRAP1-214ENST00000575854 CUL7Q14999 1698 aa20.7■□□□□ 0.91
TRAP1-214ENST00000575854 GRIN2AQ12879 1464 aa20.69■□□□□ 0.9
TRAP1-214ENST00000575854 PRXQ9BXM0 1461 aa20.62■□□□□ 0.89
TRAP1-214ENST00000575854 RAPGEF2Q9Y4G8 1499 aa20.62■□□□□ 0.89
TRAP1-214ENST00000575854 NUP160Q12769 1436 aa20.59■□□□□ 0.89
TRAP1-214ENST00000575854 CEP170Q5SW79 1584 aa20.56■□□□□ 0.88
TRAP1-214ENST00000575854 CLASP1Q7Z460 1538 aa20.53■□□□□ 0.88
TRAP1-214ENST00000575854 KIAA0586Q9BVV6 1533 aa20.48■□□□□ 0.87
TRAP1-214ENST00000575854 KIF21BO75037 1637 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms