RNA–Protein interactions for RNA: ENST00000575281.1

RFWD3-210, Transcript of ring finger and WD repeat domain 3, humanhuman

TSL 4

Gene RFWD3, Length 494 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3-210ENST00000575281 CHIC1Q5VXU3 224 aa12.31□□□□□ -0.44
RFWD3-210ENST00000575281 AEBP2Q6ZN18 517 aaPredicted RBP12.28□□□□□ -0.44
RFWD3-210ENST00000575281 NISCHQ9Y2I1 1504 aa12.04□□□□□ -0.48
RFWD3-210ENST00000575281 PHF23Q9BUL5 403 aaPredicted RBP10.8□□□□□ -0.68
RFWD3-210ENST00000575281 CCDC180Q9P1Z9 1646 aa10.62□□□□□ -0.71
RFWD3-210ENST00000575281 SENP3Q9H4L4 574 aaPredicted RBP10.49□□□□□ -0.73
RFWD3-210ENST00000575281 ABCC9O60706 1549 aa10.38□□□□□ -0.75
RFWD3-210ENST00000575281 PLPPR3Q6T4P5 718 aa10.16□□□□□ -0.78
RFWD3-210ENST00000575281 ZCCHC6Q5VYS8 1495 aaKnown RBP10.07□□□□□ -0.8
RFWD3-210ENST00000575281 DCAF8L2P0C7V8 631 aa9.97□□□□□ -0.81
RFWD3-210ENST00000575281 NACADO15069 1562 aa9.95□□□□□ -0.82
RFWD3-210ENST00000575281 RB1CC1Q8TDY2 1594 aa9.93□□□□□ -0.82
RFWD3-210ENST00000575281 DCAF1Q9Y4B6 1507 aa9.92□□□□□ -0.82
RFWD3-210ENST00000575281 MYO15BQ96JP2 1530 aa9.92□□□□□ -0.82
RFWD3-210ENST00000575281 UNC13AQ9UPW8 1703 aa9.78□□□□□ -0.84
RFWD3-210ENST00000575281 SCRIBQ14160 1630 aa9.76□□□□□ -0.85
RFWD3-210ENST00000575281 BICRAQ9NZM4 1560 aa9.75□□□□□ -0.85
RFWD3-210ENST00000575281 PABPN1Q86U42 306 aaKnown RBP eCLIP9.71□□□□□ -0.86
RFWD3-210ENST00000575281 FOXD1Q16676 465 aa9.63□□□□□ -0.87
RFWD3-210ENST00000575281 SHROOM4Q9ULL8 1493 aa9.6□□□□□ -0.87
RFWD3-210ENST00000575281 DNAJC5BQ9UF47 199 aa9.5□□□□□ -0.89
RFWD3-210ENST00000575281 ADRA2BP18089 450 aa9.46□□□□□ -0.9
RFWD3-210ENST00000575281 PPP6R1Q9UPN7 881 aa9.44□□□□□ -0.9
RFWD3-210ENST00000575281 EIF4G1Q04637 1599 aaKnown RBP9.43□□□□□ -0.9
RFWD3-210ENST00000575281 CECR2Q9BXF3 1484 aa9.43□□□□□ -0.9
RFWD3-210ENST00000575281 CC2D2AQ9P2K1 1620 aa9.38□□□□□ -0.91
RFWD3-210ENST00000575281 MROH2BQ7Z745 1585 aa9.33□□□□□ -0.92
RFWD3-210ENST00000575281 SMARCA4P51532 1647 aa9.32□□□□□ -0.92
RFWD3-210ENST00000575281 BAZ1AQ9NRL2 1556 aaPredicted RBP9.29□□□□□ -0.92
RFWD3-210ENST00000575281 ATAD2BQ9ULI0 1458 aa9.26□□□□□ -0.93
RFWD3-210ENST00000575281 RSF1Q96T23 1441 aaPredicted RBP9.22□□□□□ -0.93
RFWD3-210ENST00000575281 PEG3Q9GZU2 1588 aa9.22□□□□□ -0.93
RFWD3-210ENST00000575281 NCAPD3P42695 1498 aa9.21□□□□□ -0.93
RFWD3-210ENST00000575281 WIZO95785 1651 aa9.21□□□□□ -0.93
RFWD3-210ENST00000575281 SMARCA2P51531 1590 aa9.19□□□□□ -0.94
RFWD3-210ENST00000575281 PIAS4Q8N2W9 510 aaPredicted RBP9.18□□□□□ -0.94
RFWD3-210ENST00000575281 HMGXB3Q12766 1538 aa9.17□□□□□ -0.94
RFWD3-210ENST00000575281 BAZ1BQ9UIG0 1483 aaKnown RBP9.15□□□□□ -0.95
RFWD3-210ENST00000575281 TOP2AP11388 1531 aaKnown RBP9.09□□□□□ -0.95
RFWD3-210ENST00000575281 NESP48681 1621 aa9.04□□□□□ -0.96
RFWD3-210ENST00000575281 SUPT5HO00267 1087 aaKnown RBP9.02□□□□□ -0.97
RFWD3-210ENST00000575281 CCDC88BA6NC98 1476 aa9□□□□□ -0.97
RFWD3-210ENST00000575281 KCNA4P22459 653 aa8.99□□□□□ -0.97
RFWD3-210ENST00000575281 PPP4R3CPQ6ZMV5 832 aa8.95□□□□□ -0.98
RFWD3-210ENST00000575281 CADPSQ9ULU8 1353 aa8.94□□□□□ -0.98
RFWD3-210ENST00000575281 CFTRP13569 1480 aa8.93□□□□□ -0.98
RFWD3-210ENST00000575281 LAMC3Q9Y6N6 1575 aa8.93□□□□□ -0.98
RFWD3-210ENST00000575281 KIF21AQ7Z4S6 1674 aa8.89□□□□□ -0.99
RFWD3-210ENST00000575281 NCBP3Q53F19 620 aaKnown RBP8.87□□□□□ -0.99
RFWD3-210ENST00000575281 THOC2Q8NI27 1593 aaKnown RBP8.86□□□□□ -0.99
RFWD3-210ENST00000575281 ERCC6Q03468 1493 aa8.86□□□□□ -0.99
RFWD3-210ENST00000575281 MSH5O43196 834 aa8.86□□□□□ -0.99
RFWD3-210ENST00000575281 FANCD2Q9BXW9 1451 aa8.85□□□□□ -0.99
RFWD3-210ENST00000575281 PDS5BQ9NTI5 1447 aa8.84□□□□□ -0.99
RFWD3-210ENST00000575281 PRDM2Q13029 1718 aa8.82□□□□□ -1
RFWD3-210ENST00000575281 CEP164Q9UPV0 1460 aa8.81□□□□□ -1
RFWD3-210ENST00000575281 URB2Q14146 1524 aaKnown RBP8.8□□□□□ -1
RFWD3-210ENST00000575281 MRC2Q9UBG0 1479 aa8.8□□□□□ -1
RFWD3-210ENST00000575281 SCAF1Q9H7N4 1312 aaKnown RBP8.8□□□□□ -1
RFWD3-210ENST00000575281 WDR62O43379 1518 aa8.79□□□□□ -1
RFWD3-210ENST00000575281 CUX2O14529 1486 aa8.74□□□□□ -1.01
RFWD3-210ENST00000575281 TOPBP1Q92547 1522 aa8.74□□□□□ -1.01
RFWD3-210ENST00000575281 ABCC8Q09428 1581 aa8.73□□□□□ -1.01
RFWD3-210ENST00000575281 CUX1P39880 1505 aa8.73□□□□□ -1.01
RFWD3-210ENST00000575281 DNMBPQ6XZF7 1577 aa8.71□□□□□ -1.02
RFWD3-210ENST00000575281 SYNJ1O43426 1573 aa8.69□□□□□ -1.02
RFWD3-210ENST00000575281 CNKSR2Q8WXI2 1034 aa8.68□□□□□ -1.02
RFWD3-210ENST00000575281 POLA1P09884 1462 aaPredicted RBP8.68□□□□□ -1.02
RFWD3-210ENST00000575281 FGD5Q6ZNL6 1462 aa8.67□□□□□ -1.02
RFWD3-210ENST00000575281 RAD54L2Q9Y4B4 1467 aa8.66□□□□□ -1.02
RFWD3-210ENST00000575281 WRNQ14191 1432 aaPredicted RBP eCLIP8.66□□□□□ -1.02
RFWD3-210ENST00000575281 EHMT2Q96KQ7 1210 aa8.66□□□□□ -1.02
RFWD3-210ENST00000575281 SLC4A1APQ9BWU0 796 aaKnown RBP8.66□□□□□ -1.02
RFWD3-210ENST00000575281 ZNF608Q9ULD9 1512 aaPredicted RBP8.65□□□□□ -1.02
RFWD3-210ENST00000575281 TARBP1Q13395 1621 aaKnown RBP8.65□□□□□ -1.03
RFWD3-210ENST00000575281 NPM3O75607 178 aaKnown RBP8.64□□□□□ -1.03
RFWD3-210ENST00000575281 TOP2BQ02880 1626 aa8.64□□□□□ -1.03
RFWD3-210ENST00000575281 BIVM-ERCC5R4GMW8 1640 aa8.64□□□□□ -1.03
RFWD3-210ENST00000575281 IFT140Q96RY7 1462 aa8.62□□□□□ -1.03
RFWD3-210ENST00000575281 WDR97A6NE52 1622 aa8.61□□□□□ -1.03
RFWD3-210ENST00000575281 SOGA1O94964 1423 aa8.6□□□□□ -1.03
RFWD3-210ENST00000575281 AQRO60306 1485 aaKnown RBP eCLIP8.59□□□□□ -1.033e-7■■■■□ 20.3
RFWD3-210ENST00000575281 EIF4G3O43432 1585 aaKnown RBP8.59□□□□□ -1.03
RFWD3-210ENST00000575281 TDRD9Q8NDG6 1382 aaKnown RBP8.58□□□□□ -1.04
RFWD3-210ENST00000575281 ABCA10Q8WWZ4 1543 aa8.57□□□□□ -1.04
RFWD3-210ENST00000575281 ABCA5Q8WWZ7 1642 aa8.54□□□□□ -1.04
RFWD3-210ENST00000575281 RUSC2Q8N2Y8 1516 aa8.51□□□□□ -1.05
RFWD3-210ENST00000575281 GAPVD1Q14C86 1478 aa8.51□□□□□ -1.05
RFWD3-210ENST00000575281 SNAPC4Q5SXM2 1469 aa8.51□□□□□ -1.05
RFWD3-210ENST00000575281 PBRM1Q86U86 1689 aa8.49□□□□□ -1.05
RFWD3-210ENST00000575281 MAPK8IP2Q13387 824 aaPredicted RBP8.49□□□□□ -1.05
RFWD3-210ENST00000575281 GRIN2BQ13224 1484 aa8.48□□□□□ -1.05
RFWD3-210ENST00000575281 TRIM41Q8WV44 630 aa8.47□□□□□ -1.05
RFWD3-210ENST00000575281 ADAMTS12P58397 1594 aa8.46□□□□□ -1.06
RFWD3-210ENST00000575281 CSRNP3Q8WYN3 585 aa8.45□□□□□ -1.06
RFWD3-210ENST00000575281 CHD1O14646 1710 aa8.45□□□□□ -1.06
RFWD3-210ENST00000575281 IGF1RP08069 1367 aa8.45□□□□□ -1.06
RFWD3-210ENST00000575281 MAGI1Q96QZ7 1491 aaPredicted RBP8.45□□□□□ -1.06
RFWD3-210ENST00000575281 RNF216Q9NWF9 866 aaPredicted RBP8.44□□□□□ -1.06
RFWD3-210ENST00000575281 KIF27Q86VH2 1401 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms