RNA–Protein interactions for RNA: ENST00000575246.6

PLD2-209, Transcript of phospholipase D2, humanhuman

TSL 2

Gene PLD2, Length 2,278 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLD2-209ENST00000575246 NISCHQ9Y2I1 1504 aa27.6■■■□□ 2.01
PLD2-209ENST00000575246 CCDC180Q9P1Z9 1646 aa24.15■■□□□ 1.46
PLD2-209ENST00000575246 ZCCHC6Q5VYS8 1495 aaKnown RBP23.17■■□□□ 1.3
PLD2-209ENST00000575246 ABCC9O60706 1549 aa22.91■■□□□ 1.26
PLD2-209ENST00000575246 DCAF8L2P0C7V8 631 aa22.82■■□□□ 1.24
PLD2-209ENST00000575246 DCAF1Q9Y4B6 1507 aa22.8■■□□□ 1.24
PLD2-209ENST00000575246 MYO15BQ96JP2 1530 aa22.55■■□□□ 1.2
PLD2-209ENST00000575246 SHROOM4Q9ULL8 1493 aa22.48■■□□□ 1.19
PLD2-209ENST00000575246 NACADO15069 1562 aa22.47■■□□□ 1.19
PLD2-209ENST00000575246 RB1CC1Q8TDY2 1594 aa22.31■■□□□ 1.16
PLD2-209ENST00000575246 SCRIBQ14160 1630 aa22.21■■□□□ 1.15
PLD2-209ENST00000575246 UNC13AQ9UPW8 1703 aa22.01■■□□□ 1.11
PLD2-209ENST00000575246 BICRAQ9NZM4 1560 aa21.69■■□□□ 1.06
PLD2-209ENST00000575246 PABPN1Q86U42 306 aaKnown RBP eCLIP21.57■■□□□ 1.04
PLD2-209ENST00000575246 SUPT5HO00267 1087 aaKnown RBP21.56■■□□□ 1.04
PLD2-209ENST00000575246 CECR2Q9BXF3 1484 aa21.49■■□□□ 1.03
PLD2-209ENST00000575246 RSF1Q96T23 1441 aaPredicted RBP21.37■■□□□ 1.01
PLD2-209ENST00000575246 MROH2BQ7Z745 1585 aa21.35■■□□□ 1.01
PLD2-209ENST00000575246 BAZ1AQ9NRL2 1556 aaPredicted RBP21.32■■□□□ 1
PLD2-209ENST00000575246 SMARCA4P51532 1647 aa21.27■■□□□ 1
PLD2-209ENST00000575246 WIZO95785 1651 aa21.22■□□□□ 0.99
PLD2-209ENST00000575246 CHIC1Q5VXU3 224 aa21.04■□□□□ 0.96
PLD2-209ENST00000575246 HRCP23327 699 aa21.03■□□□□ 0.96
PLD2-209ENST00000575246 EIF4G1Q04637 1599 aaKnown RBP21.02■□□□□ 0.96
PLD2-209ENST00000575246 PEG3Q9GZU2 1588 aa20.99■□□□□ 0.95
PLD2-209ENST00000575246 DNAJC5BQ9UF47 199 aa20.97■□□□□ 0.95
PLD2-209ENST00000575246 TOP2AP11388 1531 aaKnown RBP20.93■□□□□ 0.94
PLD2-209ENST00000575246 ATAD2BQ9ULI0 1458 aa20.9■□□□□ 0.94
PLD2-209ENST00000575246 SMARCA2P51531 1590 aa20.89■□□□□ 0.93
PLD2-209ENST00000575246 BAZ1BQ9UIG0 1483 aaKnown RBP20.78■□□□□ 0.92
PLD2-209ENST00000575246 PCGF6Q9BYE7 350 aa20.76■□□□□ 0.91
PLD2-209ENST00000575246 CC2D2AQ9P2K1 1620 aa20.76■□□□□ 0.91
PLD2-209ENST00000575246 NCAPD3P42695 1498 aa20.72■□□□□ 0.91
PLD2-209ENST00000575246 HMGXB3Q12766 1538 aa20.71■□□□□ 0.91
PLD2-209ENST00000575246 CCDC88BA6NC98 1476 aa20.71■□□□□ 0.91
PLD2-209ENST00000575246 PPARGC1BQ86YN6 1023 aaKnown RBP20.55■□□□□ 0.88
PLD2-209ENST00000575246 LOC105371045A0A1W2PR82 267 aa20.47■□□□□ 0.87
PLD2-209ENST00000575246 ABCC8Q09428 1581 aa20.3■□□□□ 0.84
PLD2-209ENST00000575246 TRIM26Q12899 539 aaPredicted RBP20.28■□□□□ 0.84
PLD2-209ENST00000575246 PRDM2Q13029 1718 aa20.26■□□□□ 0.83
PLD2-209ENST00000575246 CFTRP13569 1480 aa20.25■□□□□ 0.83
PLD2-209ENST00000575246 TRIM41Q8WV44 630 aa20.24■□□□□ 0.83
PLD2-209ENST00000575246 CADPSQ9ULU8 1353 aa20.18■□□□□ 0.82
PLD2-209ENST00000575246 WRNQ14191 1432 aaPredicted RBP eCLIP20.11■□□□□ 0.81
PLD2-209ENST00000575246 NESP48681 1621 aa20.1■□□□□ 0.81
PLD2-209ENST00000575246 SYNJ1O43426 1573 aa20.09■□□□□ 0.81
PLD2-209ENST00000575246 LAMC3Q9Y6N6 1575 aa20.07■□□□□ 0.8
PLD2-209ENST00000575246 TOP2BQ02880 1626 aa20■□□□□ 0.79
PLD2-209ENST00000575246 BIVM-ERCC5R4GMW8 1640 aa19.99■□□□□ 0.79
PLD2-209ENST00000575246 ZEB1P37275 1124 aaPredicted RBP19.99■□□□□ 0.79
PLD2-209ENST00000575246 FANCD2Q9BXW9 1451 aa19.98■□□□□ 0.79
PLD2-209ENST00000575246 CUX1P39880 1505 aa19.96■□□□□ 0.79
PLD2-209ENST00000575246 KIF21AQ7Z4S6 1674 aa19.91■□□□□ 0.78
PLD2-209ENST00000575246 FAM9AQ8IZU1 332 aaPredicted RBP19.91■□□□□ 0.78
PLD2-209ENST00000575246 PDS5BQ9NTI5 1447 aa19.87■□□□□ 0.77
PLD2-209ENST00000575246 CEP164Q9UPV0 1460 aa19.86■□□□□ 0.77
PLD2-209ENST00000575246 SOGA1O94964 1423 aa19.85■□□□□ 0.77
PLD2-209ENST00000575246 RUSC2Q8N2Y8 1516 aa19.82■□□□□ 0.76
PLD2-209ENST00000575246 DNMBPQ6XZF7 1577 aa19.8■□□□□ 0.76
PLD2-209ENST00000575246 TOPBP1Q92547 1522 aa19.77■□□□□ 0.76
PLD2-209ENST00000575246 PELP1Q8IZL8 1130 aaKnown RBP19.77■□□□□ 0.75
PLD2-209ENST00000575246 URB2Q14146 1524 aaKnown RBP19.76■□□□□ 0.75
PLD2-209ENST00000575246 FGD5Q6ZNL6 1462 aa19.75■□□□□ 0.75
PLD2-209ENST00000575246 EEA1Q15075 1411 aa19.74■□□□□ 0.75
PLD2-209ENST00000575246 POLA1P09884 1462 aaPredicted RBP19.67■□□□□ 0.74
PLD2-209ENST00000575246 EHMT2Q96KQ7 1210 aa19.67■□□□□ 0.74
PLD2-209ENST00000575246 CSRNP3Q8WYN3 585 aa19.65■□□□□ 0.74
PLD2-209ENST00000575246 MRC2Q9UBG0 1479 aa19.64■□□□□ 0.74
PLD2-209ENST00000575246 SCAF1Q9H7N4 1312 aaKnown RBP19.62■□□□□ 0.73
PLD2-209ENST00000575246 ERCC6Q03468 1493 aa19.62■□□□□ 0.73
PLD2-209ENST00000575246 RAD54L2Q9Y4B4 1467 aa19.61■□□□□ 0.73
PLD2-209ENST00000575246 KIF27Q86VH2 1401 aa19.59■□□□□ 0.73
PLD2-209ENST00000575246 CUX2O14529 1486 aa19.59■□□□□ 0.73
PLD2-209ENST00000575246 WDR97A6NE52 1622 aa19.58■□□□□ 0.72
PLD2-209ENST00000575246 THOC2Q8NI27 1593 aaKnown RBP19.57■□□□□ 0.72
PLD2-209ENST00000575246 WDR62O43379 1518 aa19.57■□□□□ 0.72
PLD2-209ENST00000575246 ABCA10Q8WWZ4 1543 aa19.56■□□□□ 0.72
PLD2-209ENST00000575246 KIF21BO75037 1637 aa19.55■□□□□ 0.72
PLD2-209ENST00000575246 TARBP1Q13395 1621 aaKnown RBP19.51■□□□□ 0.71
PLD2-209ENST00000575246 GOLGA3Q08378 1498 aa19.49■□□□□ 0.71
PLD2-209ENST00000575246 RAPGEF2Q9Y4G8 1499 aa19.46■□□□□ 0.71
PLD2-209ENST00000575246 PRXQ9BXM0 1461 aa19.46■□□□□ 0.71
PLD2-209ENST00000575246 ABCA5Q8WWZ7 1642 aa19.45■□□□□ 0.7
PLD2-209ENST00000575246 IGF1RP08069 1367 aa19.44■□□□□ 0.7
PLD2-209ENST00000575246 ERICH3Q5RHP9 1530 aa19.42■□□□□ 0.7
PLD2-209ENST00000575246 TDRD9Q8NDG6 1382 aaKnown RBP19.41■□□□□ 0.7
PLD2-209ENST00000575246 UBTFP17480 764 aaKnown RBP19.4■□□□□ 0.7
PLD2-209ENST00000575246 TNIKQ9UKE5 1360 aa19.39■□□□□ 0.7
PLD2-209ENST00000575246 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.39■□□□□ 0.69
PLD2-209ENST00000575246 IFT140Q96RY7 1462 aa19.37■□□□□ 0.69
PLD2-209ENST00000575246 GAPVD1Q14C86 1478 aa19.37■□□□□ 0.69
PLD2-209ENST00000575246 MYT1Q01538 1121 aa19.36■□□□□ 0.69
PLD2-209ENST00000575246 PBRM1Q86U86 1689 aa19.36■□□□□ 0.69
PLD2-209ENST00000575246 CUL7Q14999 1698 aa19.34■□□□□ 0.69
PLD2-209ENST00000575246 CCER1Q8TC90 406 aaPredicted RBP19.34■□□□□ 0.69
PLD2-209ENST00000575246 CARMIL1Q5VZK9 1371 aa19.33■□□□□ 0.69
PLD2-209ENST00000575246 ZNF608Q9ULD9 1512 aaPredicted RBP19.32■□□□□ 0.68
PLD2-209ENST00000575246 CEP162Q5TB80 1403 aa19.32■□□□□ 0.68
PLD2-209ENST00000575246 AQRO60306 1485 aaKnown RBP eCLIP19.31■□□□□ 0.684e-6■■■■□ 25.1
PLD2-209ENST00000575246 ACIN1Q9UKV3 1341 aaKnown RBP19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms