RNA–Protein interactions for RNA: ENST00000574916.1

MRM3-204, Transcript of mitochondrial rRNA methyltransferase 3, humanhuman

TSL 2

Gene MRM3, Length 770 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRM3-204ENST00000574916 NISCHQ9Y2I1 1504 aa50.92■■■■■ 5.74
MRM3-204ENST00000574916 CCDC180Q9P1Z9 1646 aa45.1■■■■■ 4.81
MRM3-204ENST00000574916 ABCC9O60706 1549 aa43.63■■■■■ 4.58
MRM3-204ENST00000574916 ZCCHC6Q5VYS8 1495 aaKnown RBP42.49■■■■■ 4.39
MRM3-204ENST00000574916 NACADO15069 1562 aa42.32■■■■■ 4.37
MRM3-204ENST00000574916 DCAF8L2P0C7V8 631 aa42.27■■■■■ 4.36
MRM3-204ENST00000574916 MYO15BQ96JP2 1530 aa42.26■■■■■ 4.36
MRM3-204ENST00000574916 RB1CC1Q8TDY2 1594 aa42.23■■■■■ 4.35
MRM3-204ENST00000574916 DCAF1Q9Y4B6 1507 aa42.21■■■■■ 4.35
MRM3-204ENST00000574916 UNC13AQ9UPW8 1703 aa41.24■■■■■ 4.19
MRM3-204ENST00000574916 SCRIBQ14160 1630 aa41.07■■■■■ 4.17
MRM3-204ENST00000574916 BICRAQ9NZM4 1560 aa40.93■■■■■ 4.14
MRM3-204ENST00000574916 PABPN1Q86U42 306 aaKnown RBP eCLIP40.84■■■■■ 4.13
MRM3-204ENST00000574916 SHROOM4Q9ULL8 1493 aa40.63■■■■■ 4.09
MRM3-204ENST00000574916 EIF4G1Q04637 1599 aaKnown RBP39.8■■■■□ 3.96
MRM3-204ENST00000574916 DNAJC5BQ9UF47 199 aa39.7■■■■□ 3.95
MRM3-204ENST00000574916 CECR2Q9BXF3 1484 aa39.57■■■■□ 3.93
MRM3-204ENST00000574916 CC2D2AQ9P2K1 1620 aa39.53■■■■□ 3.92
MRM3-204ENST00000574916 BAZ1AQ9NRL2 1556 aaPredicted RBP39.44■■■■□ 3.9
MRM3-204ENST00000574916 SMARCA4P51532 1647 aa39.4■■■■□ 3.9
MRM3-204ENST00000574916 MROH2BQ7Z745 1585 aa39.21■■■■□ 3.87
MRM3-204ENST00000574916 ATAD2BQ9ULI0 1458 aa39.1■■■■□ 3.85
MRM3-204ENST00000574916 SMARCA2P51531 1590 aa39.08■■■■□ 3.85
MRM3-204ENST00000574916 PEG3Q9GZU2 1588 aa39.07■■■■□ 3.84
MRM3-204ENST00000574916 NCAPD3P42695 1498 aa39.05■■■■□ 3.84
MRM3-204ENST00000574916 RSF1Q96T23 1441 aaPredicted RBP38.94■■■■□ 3.82
MRM3-204ENST00000574916 HMGXB3Q12766 1538 aa38.89■■■■□ 3.82
MRM3-204ENST00000574916 WIZO95785 1651 aa38.79■■■■□ 3.8
MRM3-204ENST00000574916 BAZ1BQ9UIG0 1483 aaKnown RBP38.77■■■■□ 3.8
MRM3-204ENST00000574916 TOP2AP11388 1531 aaKnown RBP38.45■■■■□ 3.75
MRM3-204ENST00000574916 SUPT5HO00267 1087 aaKnown RBP38.18■■■■□ 3.7
MRM3-204ENST00000574916 CCDC88BA6NC98 1476 aa37.99■■■■□ 3.67
MRM3-204ENST00000574916 LAMC3Q9Y6N6 1575 aa37.93■■■■□ 3.66
MRM3-204ENST00000574916 CADPSQ9ULU8 1353 aa37.92■■■■□ 3.66
MRM3-204ENST00000574916 NESP48681 1621 aa37.88■■■■□ 3.65
MRM3-204ENST00000574916 CFTRP13569 1480 aa37.78■■■■□ 3.64
MRM3-204ENST00000574916 PDS5BQ9NTI5 1447 aa37.67■■■■□ 3.62
MRM3-204ENST00000574916 ERCC6Q03468 1493 aa37.58■■■■□ 3.61
MRM3-204ENST00000574916 PRDM2Q13029 1718 aa37.51■■■■□ 3.6
MRM3-204ENST00000574916 KIF21AQ7Z4S6 1674 aa37.46■■■■□ 3.59
MRM3-204ENST00000574916 FANCD2Q9BXW9 1451 aa37.45■■■■□ 3.59
MRM3-204ENST00000574916 CEP164Q9UPV0 1460 aa37.36■■■■□ 3.57
MRM3-204ENST00000574916 THOC2Q8NI27 1593 aaKnown RBP37.25■■■■□ 3.55
MRM3-204ENST00000574916 MRC2Q9UBG0 1479 aa37.23■■■■□ 3.55
MRM3-204ENST00000574916 CUX2O14529 1486 aa37.12■■■■□ 3.53
MRM3-204ENST00000574916 WDR62O43379 1518 aa37.1■■■■□ 3.53
MRM3-204ENST00000574916 URB2Q14146 1524 aaKnown RBP37.04■■■■□ 3.52
MRM3-204ENST00000574916 ABCC8Q09428 1581 aa36.99■■■■□ 3.51
MRM3-204ENST00000574916 TOPBP1Q92547 1522 aa36.9■■■■□ 3.5
MRM3-204ENST00000574916 DNMBPQ6XZF7 1577 aa36.9■■■■□ 3.5
MRM3-204ENST00000574916 CUX1P39880 1505 aa36.76■■■■□ 3.48
MRM3-204ENST00000574916 WRNQ14191 1432 aaPredicted RBP eCLIP36.69■■■■□ 3.46
MRM3-204ENST00000574916 POLA1P09884 1462 aaPredicted RBP36.61■■■■□ 3.45
MRM3-204ENST00000574916 IFT140Q96RY7 1462 aa36.59■■■■□ 3.45
MRM3-204ENST00000574916 TOP2BQ02880 1626 aa36.58■■■■□ 3.45
MRM3-204ENST00000574916 BIVM-ERCC5R4GMW8 1640 aa36.57■■■■□ 3.44
MRM3-204ENST00000574916 FGD5Q6ZNL6 1462 aa36.56■■■■□ 3.44
MRM3-204ENST00000574916 SYNJ1O43426 1573 aa36.54■■■■□ 3.44
MRM3-204ENST00000574916 SOGA1O94964 1423 aa36.48■■■■□ 3.43
MRM3-204ENST00000574916 TARBP1Q13395 1621 aaKnown RBP36.47■■■■□ 3.43
MRM3-204ENST00000574916 RAD54L2Q9Y4B4 1467 aa36.42■■■■□ 3.42
MRM3-204ENST00000574916 ZNF608Q9ULD9 1512 aaPredicted RBP36.33■■■■□ 3.41
MRM3-204ENST00000574916 ABCA10Q8WWZ4 1543 aa36.29■■■■□ 3.4
MRM3-204ENST00000574916 WDR97A6NE52 1622 aa36.26■■■■□ 3.4
MRM3-204ENST00000574916 EIF4G3O43432 1585 aaKnown RBP36.2■■■■□ 3.39
MRM3-204ENST00000574916 AQRO60306 1485 aaKnown RBP eCLIP36.19■■■■□ 3.381e-7■■■■■ 38.9
MRM3-204ENST00000574916 TDRD9Q8NDG6 1382 aaKnown RBP36.18■■■■□ 3.38
MRM3-204ENST00000574916 TRIM41Q8WV44 630 aa36.1■■■■□ 3.37
MRM3-204ENST00000574916 ABCA5Q8WWZ7 1642 aa36.07■■■■□ 3.36
MRM3-204ENST00000574916 GAPVD1Q14C86 1478 aa36.06■■■■□ 3.36
MRM3-204ENST00000574916 GRIN2BQ13224 1484 aa36.01■■■■□ 3.36
MRM3-204ENST00000574916 CHIC1Q5VXU3 224 aa35.95■■■■□ 3.35
MRM3-204ENST00000574916 PBRM1Q86U86 1689 aa35.93■■■■□ 3.34
MRM3-204ENST00000574916 KIF27Q86VH2 1401 aa35.91■■■■□ 3.34
MRM3-204ENST00000574916 MAGI1Q96QZ7 1491 aaPredicted RBP35.88■■■■□ 3.33
MRM3-204ENST00000574916 ERICH3Q5RHP9 1530 aa35.86■■■■□ 3.33
MRM3-204ENST00000574916 SNAPC4Q5SXM2 1469 aa35.86■■■■□ 3.33
MRM3-204ENST00000574916 IGF1RP08069 1367 aa35.73■■■■□ 3.31
MRM3-204ENST00000574916 SYNJ2O15056 1496 aa35.73■■■■□ 3.31
MRM3-204ENST00000574916 ADAMTS12P58397 1594 aa35.68■■■■□ 3.3
MRM3-204ENST00000574916 FHAD1B1AJZ9 1412 aa35.68■■■■□ 3.3
MRM3-204ENST00000574916 CHD1O14646 1710 aa35.66■■■■□ 3.3
MRM3-204ENST00000574916 CHMP7Q8WUX9 453 aaPredicted RBP35.66■■■■□ 3.3
MRM3-204ENST00000574916 OSCARQ8IYS5 282 aa35.65■■■■□ 3.3
MRM3-204ENST00000574916 RUSC2Q8N2Y8 1516 aa35.65■■■■□ 3.3
MRM3-204ENST00000574916 FBLN2P98095 1184 aa35.64■■■■□ 3.3
MRM3-204ENST00000574916 CUL7Q14999 1698 aa35.59■■■■□ 3.29
MRM3-204ENST00000574916 DNAJC5Q9H3Z4 198 aa35.59■■■■□ 3.29
MRM3-204ENST00000574916 EEA1Q15075 1411 aa35.55■■■■□ 3.28
MRM3-204ENST00000574916 GRIN2AQ12879 1464 aa35.54■■■■□ 3.28
MRM3-204ENST00000574916 CARMIL1Q5VZK9 1371 aa35.51■■■■□ 3.28
MRM3-204ENST00000574916 CSRNP3Q8WYN3 585 aa35.4■■■■□ 3.26
MRM3-204ENST00000574916 NUP160Q12769 1436 aa35.39■■■■□ 3.26
MRM3-204ENST00000574916 RAPGEF2Q9Y4G8 1499 aa35.35■■■■□ 3.25
MRM3-204ENST00000574916 PRXQ9BXM0 1461 aa35.34■■■■□ 3.25
MRM3-204ENST00000574916 CLASP1Q7Z460 1538 aa35.33■■■■□ 3.25
MRM3-204ENST00000574916 CEP170Q5SW79 1584 aa35.31■■■■□ 3.24
MRM3-204ENST00000574916 FAM9AQ8IZU1 332 aaPredicted RBP35.25■■■■□ 3.23
MRM3-204ENST00000574916 KIAA0586Q9BVV6 1533 aa35.16■■■■□ 3.22
MRM3-204ENST00000574916 KIF21BO75037 1637 aa35.1■■■■□ 3.21
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms