RNA–Protein interactions for RNA: ENST00000574684.1

TP53-215, Transcript of tumor protein p53, humanhuman

TSL 1 (best)

Gene TP53, Length 104 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-215ENST00000574684 NISCHQ9Y2I1 1504 aa17.64■□□□□ 0.41
TP53-215ENST00000574684 CCDC180Q9P1Z9 1646 aa15.65■□□□□ 0.1
TP53-215ENST00000574684 ABCC9O60706 1549 aa15.22■□□□□ 0.03
TP53-215ENST00000574684 DCAF8L2P0C7V8 631 aa14.85□□□□□ -0.03
TP53-215ENST00000574684 RB1CC1Q8TDY2 1594 aa14.72□□□□□ -0.05
TP53-215ENST00000574684 ZCCHC6Q5VYS8 1495 aaKnown RBP14.71□□□□□ -0.05
TP53-215ENST00000574684 NACADO15069 1562 aa14.7□□□□□ -0.06
TP53-215ENST00000574684 MYO15BQ96JP2 1530 aa14.61□□□□□ -0.07
TP53-215ENST00000574684 DCAF1Q9Y4B6 1507 aa14.6□□□□□ -0.07
TP53-215ENST00000574684 SCRIBQ14160 1630 aa14.32□□□□□ -0.12
TP53-215ENST00000574684 UNC13AQ9UPW8 1703 aa14.28□□□□□ -0.12
TP53-215ENST00000574684 PABPN1Q86U42 306 aaKnown RBP eCLIP14.24□□□□□ -0.13
TP53-215ENST00000574684 BICRAQ9NZM4 1560 aa14.13□□□□□ -0.15
TP53-215ENST00000574684 SHROOM4Q9ULL8 1493 aa14.11□□□□□ -0.15
TP53-215ENST00000574684 EIF4G1Q04637 1599 aaKnown RBP13.83□□□□□ -0.19
TP53-215ENST00000574684 CC2D2AQ9P2K1 1620 aa13.74□□□□□ -0.21
TP53-215ENST00000574684 DNAJC5BQ9UF47 199 aa13.73□□□□□ -0.21
TP53-215ENST00000574684 BAZ1AQ9NRL2 1556 aaPredicted RBP13.72□□□□□ -0.21
TP53-215ENST00000574684 CECR2Q9BXF3 1484 aa13.69□□□□□ -0.22
TP53-215ENST00000574684 SMARCA4P51532 1647 aa13.68□□□□□ -0.22
TP53-215ENST00000574684 SMARCA2P51531 1590 aa13.6□□□□□ -0.23
TP53-215ENST00000574684 MROH2BQ7Z745 1585 aa13.58□□□□□ -0.24
TP53-215ENST00000574684 ATAD2BQ9ULI0 1458 aa13.55□□□□□ -0.24
TP53-215ENST00000574684 NCAPD3P42695 1498 aa13.52□□□□□ -0.25
TP53-215ENST00000574684 BAZ1BQ9UIG0 1483 aaKnown RBP13.52□□□□□ -0.25
TP53-215ENST00000574684 PEG3Q9GZU2 1588 aa13.5□□□□□ -0.25
TP53-215ENST00000574684 HMGXB3Q12766 1538 aa13.49□□□□□ -0.25
TP53-215ENST00000574684 RSF1Q96T23 1441 aaPredicted RBP13.47□□□□□ -0.25
TP53-215ENST00000574684 WIZO95785 1651 aa13.46□□□□□ -0.26
TP53-215ENST00000574684 SUPT5HO00267 1087 aaKnown RBP13.36□□□□□ -0.27
TP53-215ENST00000574684 TOP2AP11388 1531 aaKnown RBP13.35□□□□□ -0.27
TP53-215ENST00000574684 LAMC3Q9Y6N6 1575 aa13.2□□□□□ -0.3
TP53-215ENST00000574684 ERCC6Q03468 1493 aa13.19□□□□□ -0.3
TP53-215ENST00000574684 CCDC88BA6NC98 1476 aa13.17□□□□□ -0.3
TP53-215ENST00000574684 CADPSQ9ULU8 1353 aa13.17□□□□□ -0.3
TP53-215ENST00000574684 NESP48681 1621 aa13.15□□□□□ -0.3
TP53-215ENST00000574684 PDS5BQ9NTI5 1447 aa13.14□□□□□ -0.31
TP53-215ENST00000574684 CFTRP13569 1480 aa13.09□□□□□ -0.31
TP53-215ENST00000574684 FANCD2Q9BXW9 1451 aa13.04□□□□□ -0.32
TP53-215ENST00000574684 CEP164Q9UPV0 1460 aa13.04□□□□□ -0.32
TP53-215ENST00000574684 PRDM2Q13029 1718 aa13.03□□□□□ -0.32
TP53-215ENST00000574684 KIF21AQ7Z4S6 1674 aa13.02□□□□□ -0.32
TP53-215ENST00000574684 MRC2Q9UBG0 1479 aa12.97□□□□□ -0.33
TP53-215ENST00000574684 CUX2O14529 1486 aa12.93□□□□□ -0.34
TP53-215ENST00000574684 THOC2Q8NI27 1593 aaKnown RBP12.93□□□□□ -0.34
TP53-215ENST00000574684 ABCC8Q09428 1581 aa12.89□□□□□ -0.35
TP53-215ENST00000574684 WDR62O43379 1518 aa12.88□□□□□ -0.35
TP53-215ENST00000574684 URB2Q14146 1524 aaKnown RBP12.84□□□□□ -0.35
TP53-215ENST00000574684 DNMBPQ6XZF7 1577 aa12.83□□□□□ -0.36
TP53-215ENST00000574684 TOPBP1Q92547 1522 aa12.82□□□□□ -0.36
TP53-215ENST00000574684 WRNQ14191 1432 aaPredicted RBP eCLIP12.77□□□□□ -0.37
TP53-215ENST00000574684 CUX1P39880 1505 aa12.74□□□□□ -0.37
TP53-215ENST00000574684 IFT140Q96RY7 1462 aa12.74□□□□□ -0.37
TP53-215ENST00000574684 FGD5Q6ZNL6 1462 aa12.72□□□□□ -0.37
TP53-215ENST00000574684 POLA1P09884 1462 aaPredicted RBP12.71□□□□□ -0.38
TP53-215ENST00000574684 SOGA1O94964 1423 aa12.71□□□□□ -0.38
TP53-215ENST00000574684 TOP2BQ02880 1626 aa12.7□□□□□ -0.38
TP53-215ENST00000574684 BIVM-ERCC5R4GMW8 1640 aa12.68□□□□□ -0.38
TP53-215ENST00000574684 SYNJ1O43426 1573 aa12.68□□□□□ -0.38
TP53-215ENST00000574684 RAD54L2Q9Y4B4 1467 aa12.65□□□□□ -0.38
TP53-215ENST00000574684 TRIM41Q8WV44 630 aa12.64□□□□□ -0.39
TP53-215ENST00000574684 TARBP1Q13395 1621 aaKnown RBP12.63□□□□□ -0.39
TP53-215ENST00000574684 EIF4G3O43432 1585 aaKnown RBP12.61□□□□□ -0.39
TP53-215ENST00000574684 WDR97A6NE52 1622 aa12.61□□□□□ -0.39
TP53-215ENST00000574684 ZNF608Q9ULD9 1512 aaPredicted RBP12.61□□□□□ -0.39
TP53-215ENST00000574684 TDRD9Q8NDG6 1382 aaKnown RBP12.6□□□□□ -0.39
TP53-215ENST00000574684 AQRO60306 1485 aaKnown RBP eCLIP12.59□□□□□ -0.39
TP53-215ENST00000574684 ABCA10Q8WWZ4 1543 aa12.58□□□□□ -0.4
TP53-215ENST00000574684 GAPVD1Q14C86 1478 aa12.55□□□□□ -0.4
TP53-215ENST00000574684 GRIN2BQ13224 1484 aa12.54□□□□□ -0.4
TP53-215ENST00000574684 FBLN2P98095 1184 aa12.53□□□□□ -0.4
TP53-215ENST00000574684 KIF27Q86VH2 1401 aa12.53□□□□□ -0.4
TP53-215ENST00000574684 PBRM1Q86U86 1689 aa12.51□□□□□ -0.41
TP53-215ENST00000574684 ABCA5Q8WWZ7 1642 aa12.51□□□□□ -0.41
TP53-215ENST00000574684 SNAPC4Q5SXM2 1469 aa12.5□□□□□ -0.41
TP53-215ENST00000574684 MAGI1Q96QZ7 1491 aaPredicted RBP12.49□□□□□ -0.41
TP53-215ENST00000574684 CHMP7Q8WUX9 453 aaPredicted RBP12.49□□□□□ -0.41
TP53-215ENST00000574684 ERICH3Q5RHP9 1530 aa12.46□□□□□ -0.42
TP53-215ENST00000574684 CHIC1Q5VXU3 224 aa12.45□□□□□ -0.42
TP53-215ENST00000574684 OSCARQ8IYS5 282 aa12.45□□□□□ -0.42
TP53-215ENST00000574684 SYNJ2O15056 1496 aa12.44□□□□□ -0.42
TP53-215ENST00000574684 FHAD1B1AJZ9 1412 aa12.42□□□□□ -0.42
TP53-215ENST00000574684 CHD1O14646 1710 aa12.42□□□□□ -0.42
TP53-215ENST00000574684 ADAMTS12P58397 1594 aa12.4□□□□□ -0.42
TP53-215ENST00000574684 CUL7Q14999 1698 aa12.4□□□□□ -0.42
TP53-215ENST00000574684 EEA1Q15075 1411 aa12.37□□□□□ -0.43
TP53-215ENST00000574684 IGF1RP08069 1367 aa12.37□□□□□ -0.43
TP53-215ENST00000574684 GRIN2AQ12879 1464 aa12.37□□□□□ -0.43
TP53-215ENST00000574684 FAM9AQ8IZU1 332 aaPredicted RBP12.36□□□□□ -0.43
TP53-215ENST00000574684 CARMIL1Q5VZK9 1371 aa12.35□□□□□ -0.43
TP53-215ENST00000574684 DNAJC5Q9H3Z4 198 aa12.35□□□□□ -0.43
TP53-215ENST00000574684 RUSC2Q8N2Y8 1516 aa12.33□□□□□ -0.44
TP53-215ENST00000574684 CSRNP3Q8WYN3 585 aa12.32□□□□□ -0.44
TP53-215ENST00000574684 RAPGEF2Q9Y4G8 1499 aa12.31□□□□□ -0.44
TP53-215ENST00000574684 CEP170Q5SW79 1584 aa12.26□□□□□ -0.45
TP53-215ENST00000574684 NUP160Q12769 1436 aa12.26□□□□□ -0.45
TP53-215ENST00000574684 CLASP1Q7Z460 1538 aa12.25□□□□□ -0.45
TP53-215ENST00000574684 PRXQ9BXM0 1461 aa12.22□□□□□ -0.45
TP53-215ENST00000574684 KIAA0586Q9BVV6 1533 aa12.21□□□□□ -0.45
TP53-215ENST00000574684 EHMT2Q96KQ7 1210 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms