RNA–Protein interactions for RNA: ENST00000574450.1

LCMT1-209, Transcript of leucine carboxyl methyltransferase 1, humanhuman

TSL 2

Gene LCMT1, Length 517 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT1-209ENST00000574450 NISCHQ9Y2I1 1504 aa34.64■■■■□ 3.14
LCMT1-209ENST00000574450 CCDC180Q9P1Z9 1646 aa30.69■■■□□ 2.5
LCMT1-209ENST00000574450 ABCC9O60706 1549 aa29.66■■■□□ 2.34
LCMT1-209ENST00000574450 ZCCHC6Q5VYS8 1495 aaKnown RBP28.9■■■□□ 2.22
LCMT1-209ENST00000574450 NACADO15069 1562 aa28.81■■■□□ 2.2
LCMT1-209ENST00000574450 MYO15BQ96JP2 1530 aa28.79■■■□□ 2.2
LCMT1-209ENST00000574450 DCAF8L2P0C7V8 631 aa28.78■■■□□ 2.2
LCMT1-209ENST00000574450 RB1CC1Q8TDY2 1594 aa28.75■■■□□ 2.19
LCMT1-209ENST00000574450 DCAF1Q9Y4B6 1507 aa28.75■■■□□ 2.19
LCMT1-209ENST00000574450 UNC13AQ9UPW8 1703 aa28.01■■■□□ 2.07
LCMT1-209ENST00000574450 SCRIBQ14160 1630 aa27.91■■■□□ 2.06
LCMT1-209ENST00000574450 BICRAQ9NZM4 1560 aa27.82■■■□□ 2.04
LCMT1-209ENST00000574450 PABPN1Q86U42 306 aaKnown RBP eCLIP27.77■■■□□ 2.04
LCMT1-209ENST00000574450 SHROOM4Q9ULL8 1493 aa27.69■■■□□ 2.02
LCMT1-209ENST00000574450 EIF4G1Q04637 1599 aaKnown RBP27.07■■□□□ 1.92
LCMT1-209ENST00000574450 DNAJC5BQ9UF47 199 aa26.99■■□□□ 1.91
LCMT1-209ENST00000574450 CECR2Q9BXF3 1484 aa26.88■■□□□ 1.89
LCMT1-209ENST00000574450 CC2D2AQ9P2K1 1620 aa26.87■■□□□ 1.89
LCMT1-209ENST00000574450 BAZ1AQ9NRL2 1556 aaPredicted RBP26.84■■□□□ 1.89
LCMT1-209ENST00000574450 SMARCA4P51532 1647 aa26.79■■□□□ 1.88
LCMT1-209ENST00000574450 MROH2BQ7Z745 1585 aa26.65■■□□□ 1.86
LCMT1-209ENST00000574450 SMARCA2P51531 1590 aa26.62■■□□□ 1.85
LCMT1-209ENST00000574450 NCAPD3P42695 1498 aa26.6■■□□□ 1.85
LCMT1-209ENST00000574450 ATAD2BQ9ULI0 1458 aa26.6■■□□□ 1.85
LCMT1-209ENST00000574450 PEG3Q9GZU2 1588 aa26.58■■□□□ 1.85
LCMT1-209ENST00000574450 RSF1Q96T23 1441 aaPredicted RBP26.48■■□□□ 1.83
LCMT1-209ENST00000574450 HMGXB3Q12766 1538 aa26.46■■□□□ 1.83
LCMT1-209ENST00000574450 BAZ1BQ9UIG0 1483 aaKnown RBP26.39■■□□□ 1.82
LCMT1-209ENST00000574450 WIZO95785 1651 aa26.35■■□□□ 1.81
LCMT1-209ENST00000574450 TOP2AP11388 1531 aaKnown RBP26.14■■□□□ 1.78
LCMT1-209ENST00000574450 SUPT5HO00267 1087 aaKnown RBP25.98■■□□□ 1.75
LCMT1-209ENST00000574450 CCDC88BA6NC98 1476 aa25.84■■□□□ 1.73
LCMT1-209ENST00000574450 LAMC3Q9Y6N6 1575 aa25.83■■□□□ 1.73
LCMT1-209ENST00000574450 CADPSQ9ULU8 1353 aa25.82■■□□□ 1.72
LCMT1-209ENST00000574450 NESP48681 1621 aa25.74■■□□□ 1.71
LCMT1-209ENST00000574450 CFTRP13569 1480 aa25.72■■□□□ 1.71
LCMT1-209ENST00000574450 PDS5BQ9NTI5 1447 aa25.67■■□□□ 1.7
LCMT1-209ENST00000574450 ERCC6Q03468 1493 aa25.6■■□□□ 1.69
LCMT1-209ENST00000574450 PRDM2Q13029 1718 aa25.5■■□□□ 1.67
LCMT1-209ENST00000574450 FANCD2Q9BXW9 1451 aa25.47■■□□□ 1.67
LCMT1-209ENST00000574450 KIF21AQ7Z4S6 1674 aa25.45■■□□□ 1.67
LCMT1-209ENST00000574450 CEP164Q9UPV0 1460 aa25.43■■□□□ 1.66
LCMT1-209ENST00000574450 MRC2Q9UBG0 1479 aa25.33■■□□□ 1.65
LCMT1-209ENST00000574450 THOC2Q8NI27 1593 aaKnown RBP25.31■■□□□ 1.64
LCMT1-209ENST00000574450 CUX2O14529 1486 aa25.28■■□□□ 1.64
LCMT1-209ENST00000574450 WDR62O43379 1518 aa25.23■■□□□ 1.63
LCMT1-209ENST00000574450 ABCC8Q09428 1581 aa25.22■■□□□ 1.63
LCMT1-209ENST00000574450 URB2Q14146 1524 aaKnown RBP25.17■■□□□ 1.62
LCMT1-209ENST00000574450 DNMBPQ6XZF7 1577 aa25.1■■□□□ 1.61
LCMT1-209ENST00000574450 TOPBP1Q92547 1522 aa25.09■■□□□ 1.61
LCMT1-209ENST00000574450 CUX1P39880 1505 aa24.98■■□□□ 1.59
LCMT1-209ENST00000574450 WRNQ14191 1432 aaPredicted RBP eCLIP24.97■■□□□ 1.59
LCMT1-209ENST00000574450 IFT140Q96RY7 1462 aa24.91■■□□□ 1.58
LCMT1-209ENST00000574450 POLA1P09884 1462 aaPredicted RBP24.89■■□□□ 1.58
LCMT1-209ENST00000574450 TOP2BQ02880 1626 aa24.89■■□□□ 1.57
LCMT1-209ENST00000574450 BIVM-ERCC5R4GMW8 1640 aa24.86■■□□□ 1.57
LCMT1-209ENST00000574450 FGD5Q6ZNL6 1462 aa24.86■■□□□ 1.57
LCMT1-209ENST00000574450 SOGA1O94964 1423 aa24.84■■□□□ 1.57
LCMT1-209ENST00000574450 SYNJ1O43426 1573 aa24.82■■□□□ 1.56
LCMT1-209ENST00000574450 TARBP1Q13395 1621 aaKnown RBP24.8■■□□□ 1.56
LCMT1-209ENST00000574450 RAD54L2Q9Y4B4 1467 aa24.75■■□□□ 1.55
LCMT1-209ENST00000574450 WDR97A6NE52 1622 aa24.71■■□□□ 1.55
LCMT1-209ENST00000574450 ZNF608Q9ULD9 1512 aaPredicted RBP24.69■■□□□ 1.54
LCMT1-209ENST00000574450 ABCA10Q8WWZ4 1543 aa24.68■■□□□ 1.54
LCMT1-209ENST00000574450 TDRD9Q8NDG6 1382 aaKnown RBP24.62■■□□□ 1.53
LCMT1-209ENST00000574450 AQRO60306 1485 aaKnown RBP eCLIP24.61■■□□□ 1.53
LCMT1-209ENST00000574450 EIF4G3O43432 1585 aaKnown RBP24.61■■□□□ 1.53
LCMT1-209ENST00000574450 TRIM41Q8WV44 630 aa24.6■■□□□ 1.53
LCMT1-209ENST00000574450 GAPVD1Q14C86 1478 aa24.55■■□□□ 1.52
LCMT1-209ENST00000574450 GRIN2BQ13224 1484 aa24.52■■□□□ 1.52
LCMT1-209ENST00000574450 ABCA5Q8WWZ7 1642 aa24.51■■□□□ 1.51
LCMT1-209ENST00000574450 KIF27Q86VH2 1401 aa24.46■■□□□ 1.51
LCMT1-209ENST00000574450 CHIC1Q5VXU3 224 aa24.45■■□□□ 1.5
LCMT1-209ENST00000574450 MAGI1Q96QZ7 1491 aaPredicted RBP24.44■■□□□ 1.5
LCMT1-209ENST00000574450 ERICH3Q5RHP9 1530 aa24.41■■□□□ 1.5
LCMT1-209ENST00000574450 PBRM1Q86U86 1689 aa24.41■■□□□ 1.5
LCMT1-209ENST00000574450 SNAPC4Q5SXM2 1469 aa24.38■■□□□ 1.49
LCMT1-209ENST00000574450 SYNJ2O15056 1496 aa24.32■■□□□ 1.48
LCMT1-209ENST00000574450 IGF1RP08069 1367 aa24.32■■□□□ 1.48
LCMT1-209ENST00000574450 OSCARQ8IYS5 282 aa24.32■■□□□ 1.48
LCMT1-209ENST00000574450 CHMP7Q8WUX9 453 aaPredicted RBP24.31■■□□□ 1.48
LCMT1-209ENST00000574450 FHAD1B1AJZ9 1412 aa24.29■■□□□ 1.48
LCMT1-209ENST00000574450 FBLN2P98095 1184 aa24.27■■□□□ 1.48
LCMT1-209ENST00000574450 ADAMTS12P58397 1594 aa24.25■■□□□ 1.47
LCMT1-209ENST00000574450 CHD1O14646 1710 aa24.23■■□□□ 1.47
LCMT1-209ENST00000574450 CUL7Q14999 1698 aa24.22■■□□□ 1.47
LCMT1-209ENST00000574450 EEA1Q15075 1411 aa24.22■■□□□ 1.47
LCMT1-209ENST00000574450 RUSC2Q8N2Y8 1516 aa24.2■■□□□ 1.47
LCMT1-209ENST00000574450 DNAJC5Q9H3Z4 198 aa24.19■■□□□ 1.46
LCMT1-209ENST00000574450 GRIN2AQ12879 1464 aa24.18■■□□□ 1.46
LCMT1-209ENST00000574450 CARMIL1Q5VZK9 1371 aa24.17■■□□□ 1.46
LCMT1-209ENST00000574450 CSRNP3Q8WYN3 585 aa24.12■■□□□ 1.45
LCMT1-209ENST00000574450 NUP160Q12769 1436 aa24.08■■□□□ 1.44
LCMT1-209ENST00000574450 RAPGEF2Q9Y4G8 1499 aa24.07■■□□□ 1.44
LCMT1-209ENST00000574450 PRXQ9BXM0 1461 aa24.04■■□□□ 1.44
LCMT1-209ENST00000574450 CLASP1Q7Z460 1538 aa24.02■■□□□ 1.44
LCMT1-209ENST00000574450 CEP170Q5SW79 1584 aa23.99■■□□□ 1.43
LCMT1-209ENST00000574450 FAM9AQ8IZU1 332 aaPredicted RBP23.97■■□□□ 1.43
LCMT1-209ENST00000574450 KIAA0586Q9BVV6 1533 aa23.94■■□□□ 1.42
LCMT1-209ENST00000574450 JPH4Q96JJ6 628 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 6.2 ms