RNA–Protein interactions for RNA: ENST00000573872.5

TRAP1-208, Transcript of TNF receptor associated protein 1, humanhuman

TSL 3

Gene TRAP1, Length 656 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAP1-208ENST00000573872 NISCHQ9Y2I1 1504 aa31.8■■■□□ 2.68
TRAP1-208ENST00000573872 CCDC180Q9P1Z9 1646 aa28.18■■■□□ 2.1
TRAP1-208ENST00000573872 ABCC9O60706 1549 aa27.34■■□□□ 1.97
TRAP1-208ENST00000573872 ZCCHC6Q5VYS8 1495 aaKnown RBP26.55■■□□□ 1.84
TRAP1-208ENST00000573872 NACADO15069 1562 aa26.45■■□□□ 1.82
TRAP1-208ENST00000573872 RB1CC1Q8TDY2 1594 aa26.41■■□□□ 1.82
TRAP1-208ENST00000573872 MYO15BQ96JP2 1530 aa26.4■■□□□ 1.82
TRAP1-208ENST00000573872 DCAF1Q9Y4B6 1507 aa26.35■■□□□ 1.81
TRAP1-208ENST00000573872 DCAF8L2P0C7V8 631 aa26.35■■□□□ 1.81
TRAP1-208ENST00000573872 UNC13AQ9UPW8 1703 aa25.85■■□□□ 1.73
TRAP1-208ENST00000573872 SCRIBQ14160 1630 aa25.69■■□□□ 1.7
TRAP1-208ENST00000573872 BICRAQ9NZM4 1560 aa25.65■■□□□ 1.7
TRAP1-208ENST00000573872 PABPN1Q86U42 306 aaKnown RBP eCLIP25.57■■□□□ 1.682e-10■□□□□ 8.8
TRAP1-208ENST00000573872 SHROOM4Q9ULL8 1493 aa25.4■■□□□ 1.66
TRAP1-208ENST00000573872 DNAJC5BQ9UF47 199 aa24.96■■□□□ 1.59
TRAP1-208ENST00000573872 EIF4G1Q04637 1599 aaKnown RBP24.93■■□□□ 1.58
TRAP1-208ENST00000573872 CC2D2AQ9P2K1 1620 aa24.77■■□□□ 1.56
TRAP1-208ENST00000573872 CECR2Q9BXF3 1484 aa24.75■■□□□ 1.55
TRAP1-208ENST00000573872 SMARCA4P51532 1647 aa24.63■■□□□ 1.53
TRAP1-208ENST00000573872 BAZ1AQ9NRL2 1556 aaPredicted RBP24.62■■□□□ 1.53
TRAP1-208ENST00000573872 MROH2BQ7Z745 1585 aa24.51■■□□□ 1.51
TRAP1-208ENST00000573872 ATAD2BQ9ULI0 1458 aa24.45■■□□□ 1.51
TRAP1-208ENST00000573872 PEG3Q9GZU2 1588 aa24.42■■□□□ 1.5
TRAP1-208ENST00000573872 NCAPD3P42695 1498 aa24.42■■□□□ 1.5
TRAP1-208ENST00000573872 SMARCA2P51531 1590 aa24.41■■□□□ 1.5
TRAP1-208ENST00000573872 HMGXB3Q12766 1538 aa24.31■■□□□ 1.48
TRAP1-208ENST00000573872 RSF1Q96T23 1441 aaPredicted RBP24.31■■□□□ 1.48
TRAP1-208ENST00000573872 WIZO95785 1651 aa24.24■■□□□ 1.47
TRAP1-208ENST00000573872 BAZ1BQ9UIG0 1483 aaKnown RBP24.22■■□□□ 1.47
TRAP1-208ENST00000573872 TOP2AP11388 1531 aaKnown RBP24■■□□□ 1.43
TRAP1-208ENST00000573872 NESP48681 1621 aa23.74■■□□□ 1.39
TRAP1-208ENST00000573872 SUPT5HO00267 1087 aaKnown RBP23.73■■□□□ 1.39
TRAP1-208ENST00000573872 CCDC88BA6NC98 1476 aa23.72■■□□□ 1.39
TRAP1-208ENST00000573872 LAMC3Q9Y6N6 1575 aa23.72■■□□□ 1.39
TRAP1-208ENST00000573872 CADPSQ9ULU8 1353 aa23.69■■□□□ 1.38
TRAP1-208ENST00000573872 CFTRP13569 1480 aa23.62■■□□□ 1.37
TRAP1-208ENST00000573872 PDS5BQ9NTI5 1447 aa23.53■■□□□ 1.36
TRAP1-208ENST00000573872 ERCC6Q03468 1493 aa23.52■■□□□ 1.36
TRAP1-208ENST00000573872 KIF21AQ7Z4S6 1674 aa23.47■■□□□ 1.35
TRAP1-208ENST00000573872 PRDM2Q13029 1718 aa23.44■■□□□ 1.34
TRAP1-208ENST00000573872 FANCD2Q9BXW9 1451 aa23.41■■□□□ 1.34
TRAP1-208ENST00000573872 THOC2Q8NI27 1593 aaKnown RBP23.37■■□□□ 1.33
TRAP1-208ENST00000573872 CEP164Q9UPV0 1460 aa23.36■■□□□ 1.33
TRAP1-208ENST00000573872 MRC2Q9UBG0 1479 aa23.29■■□□□ 1.32
TRAP1-208ENST00000573872 CUX2O14529 1486 aa23.26■■□□□ 1.31
TRAP1-208ENST00000573872 WDR62O43379 1518 aa23.23■■□□□ 1.31
TRAP1-208ENST00000573872 URB2Q14146 1524 aaKnown RBP23.18■■□□□ 1.3
TRAP1-208ENST00000573872 TOPBP1Q92547 1522 aa23.08■■□□□ 1.28
TRAP1-208ENST00000573872 ABCC8Q09428 1581 aa23.06■■□□□ 1.28
TRAP1-208ENST00000573872 DNMBPQ6XZF7 1577 aa23.06■■□□□ 1.28
TRAP1-208ENST00000573872 CUX1P39880 1505 aa22.98■■□□□ 1.27
TRAP1-208ENST00000573872 POLA1P09884 1462 aaPredicted RBP22.9■■□□□ 1.26
TRAP1-208ENST00000573872 WRNQ14191 1432 aaPredicted RBP eCLIP22.88■■□□□ 1.252e-6■■□□□ 11.9
TRAP1-208ENST00000573872 IFT140Q96RY7 1462 aa22.87■■□□□ 1.25
TRAP1-208ENST00000573872 FGD5Q6ZNL6 1462 aa22.85■■□□□ 1.25
TRAP1-208ENST00000573872 SYNJ1O43426 1573 aa22.84■■□□□ 1.25
TRAP1-208ENST00000573872 TOP2BQ02880 1626 aa22.83■■□□□ 1.25
TRAP1-208ENST00000573872 BIVM-ERCC5R4GMW8 1640 aa22.83■■□□□ 1.25
TRAP1-208ENST00000573872 TARBP1Q13395 1621 aaKnown RBP22.82■■□□□ 1.24
TRAP1-208ENST00000573872 RAD54L2Q9Y4B4 1467 aa22.78■■□□□ 1.24
TRAP1-208ENST00000573872 SOGA1O94964 1423 aa22.77■■□□□ 1.24
TRAP1-208ENST00000573872 ZNF608Q9ULD9 1512 aaPredicted RBP22.76■■□□□ 1.23
TRAP1-208ENST00000573872 WDR97A6NE52 1622 aa22.69■■□□□ 1.22
TRAP1-208ENST00000573872 EIF4G3O43432 1585 aaKnown RBP22.67■■□□□ 1.22
TRAP1-208ENST00000573872 ABCA10Q8WWZ4 1543 aa22.67■■□□□ 1.22
TRAP1-208ENST00000573872 AQRO60306 1485 aaKnown RBP eCLIP22.64■■□□□ 1.218e-9■■■□□ 17
TRAP1-208ENST00000573872 TDRD9Q8NDG6 1382 aaKnown RBP22.62■■□□□ 1.21
TRAP1-208ENST00000573872 ABCA5Q8WWZ7 1642 aa22.56■■□□□ 1.2
TRAP1-208ENST00000573872 GAPVD1Q14C86 1478 aa22.53■■□□□ 1.2
TRAP1-208ENST00000573872 GRIN2BQ13224 1484 aa22.49■■□□□ 1.19
TRAP1-208ENST00000573872 PBRM1Q86U86 1689 aa22.46■■□□□ 1.19
TRAP1-208ENST00000573872 SNAPC4Q5SXM2 1469 aa22.44■■□□□ 1.18
TRAP1-208ENST00000573872 MAGI1Q96QZ7 1491 aaPredicted RBP22.42■■□□□ 1.18
TRAP1-208ENST00000573872 TRIM41Q8WV44 630 aa22.41■■□□□ 1.18
TRAP1-208ENST00000573872 ERICH3Q5RHP9 1530 aa22.39■■□□□ 1.17
TRAP1-208ENST00000573872 KIF27Q86VH2 1401 aa22.38■■□□□ 1.17
TRAP1-208ENST00000573872 CHD1O14646 1710 aa22.34■■□□□ 1.17
TRAP1-208ENST00000573872 CHIC1Q5VXU3 224 aa22.33■■□□□ 1.17
TRAP1-208ENST00000573872 SYNJ2O15056 1496 aa22.33■■□□□ 1.16
TRAP1-208ENST00000573872 ADAMTS12P58397 1594 aa22.32■■□□□ 1.16
TRAP1-208ENST00000573872 DNAJC5Q9H3Z4 198 aa22.3■■□□□ 1.16
TRAP1-208ENST00000573872 IGF1RP08069 1367 aa22.29■■□□□ 1.16
TRAP1-208ENST00000573872 OSCARQ8IYS5 282 aa22.29■■□□□ 1.16
TRAP1-208ENST00000573872 FHAD1B1AJZ9 1412 aa22.28■■□□□ 1.16
TRAP1-208ENST00000573872 RUSC2Q8N2Y8 1516 aa22.26■■□□□ 1.15
TRAP1-208ENST00000573872 FBLN2P98095 1184 aa22.25■■□□□ 1.15
TRAP1-208ENST00000573872 CHMP7Q8WUX9 453 aaPredicted RBP22.25■■□□□ 1.15
TRAP1-208ENST00000573872 GRIN2AQ12879 1464 aa22.22■■□□□ 1.15
TRAP1-208ENST00000573872 CUL7Q14999 1698 aa22.2■■□□□ 1.15
TRAP1-208ENST00000573872 CARMIL1Q5VZK9 1371 aa22.14■■□□□ 1.14
TRAP1-208ENST00000573872 CLASP1Q7Z460 1538 aa22.14■■□□□ 1.13
TRAP1-208ENST00000573872 NUP160Q12769 1436 aa22.14■■□□□ 1.13
TRAP1-208ENST00000573872 CEP170Q5SW79 1584 aa22.11■■□□□ 1.13
TRAP1-208ENST00000573872 EEA1Q15075 1411 aa22.09■■□□□ 1.13
TRAP1-208ENST00000573872 PRXQ9BXM0 1461 aa22.04■■□□□ 1.12
TRAP1-208ENST00000573872 RAPGEF2Q9Y4G8 1499 aa22.03■■□□□ 1.12
TRAP1-208ENST00000573872 CSRNP3Q8WYN3 585 aa22.01■■□□□ 1.11
TRAP1-208ENST00000573872 ARHGEF11O15085 1522 aa21.97■■□□□ 1.11
TRAP1-208ENST00000573872 KIAA0586Q9BVV6 1533 aa21.95■■□□□ 1.1
TRAP1-208ENST00000573872 RIMBP3CA6NJZ7 1639 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms