RNA–Protein interactions for RNA: ENST00000573745.1

CLDN7-206, Transcript of claudin 7, humanhuman

TSL 2

Gene CLDN7, Length 871 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN7-206ENST00000573745 NISCHQ9Y2I1 1504 aa38■■■■□ 3.67
CLDN7-206ENST00000573745 CCDC180Q9P1Z9 1646 aa33.5■■■□□ 2.95
CLDN7-206ENST00000573745 ABCC9O60706 1549 aa32.76■■■□□ 2.83
CLDN7-206ENST00000573745 DCAF8L2P0C7V8 631 aa31.93■■■□□ 2.7
CLDN7-206ENST00000573745 ZCCHC6Q5VYS8 1495 aaKnown RBP31.65■■■□□ 2.66
CLDN7-206ENST00000573745 NACADO15069 1562 aa31.59■■■□□ 2.65
CLDN7-206ENST00000573745 RB1CC1Q8TDY2 1594 aa31.53■■■□□ 2.64
CLDN7-206ENST00000573745 MYO15BQ96JP2 1530 aa31.49■■■□□ 2.63
CLDN7-206ENST00000573745 DCAF1Q9Y4B6 1507 aa31.42■■■□□ 2.62
CLDN7-206ENST00000573745 PABPN1Q86U42 306 aaKnown RBP eCLIP30.79■■■□□ 2.52
CLDN7-206ENST00000573745 SCRIBQ14160 1630 aa30.65■■■□□ 2.5
CLDN7-206ENST00000573745 UNC13AQ9UPW8 1703 aa30.61■■■□□ 2.49
CLDN7-206ENST00000573745 BICRAQ9NZM4 1560 aa30.54■■■□□ 2.48
CLDN7-206ENST00000573745 SHROOM4Q9ULL8 1493 aa30.26■■■□□ 2.44
CLDN7-206ENST00000573745 DNAJC5BQ9UF47 199 aa29.99■■■□□ 2.39
CLDN7-206ENST00000573745 EIF4G1Q04637 1599 aaKnown RBP29.73■■■□□ 2.35
CLDN7-206ENST00000573745 CECR2Q9BXF3 1484 aa29.61■■■□□ 2.33
CLDN7-206ENST00000573745 CC2D2AQ9P2K1 1620 aa29.55■■■□□ 2.32
CLDN7-206ENST00000573745 BAZ1AQ9NRL2 1556 aaPredicted RBP29.4■■■□□ 2.3
CLDN7-206ENST00000573745 SMARCA4P51532 1647 aa29.34■■■□□ 2.29
CLDN7-206ENST00000573745 MROH2BQ7Z745 1585 aa29.28■■■□□ 2.28
CLDN7-206ENST00000573745 ATAD2BQ9ULI0 1458 aa29.24■■■□□ 2.27
CLDN7-206ENST00000573745 NCAPD3P42695 1498 aa29.23■■■□□ 2.27
CLDN7-206ENST00000573745 SMARCA2P51531 1590 aa29.17■■■□□ 2.26
CLDN7-206ENST00000573745 RSF1Q96T23 1441 aaPredicted RBP29.11■■■□□ 2.25
CLDN7-206ENST00000573745 PEG3Q9GZU2 1588 aa29.06■■■□□ 2.24
CLDN7-206ENST00000573745 BAZ1BQ9UIG0 1483 aaKnown RBP28.99■■■□□ 2.23
CLDN7-206ENST00000573745 HMGXB3Q12766 1538 aa28.97■■■□□ 2.23
CLDN7-206ENST00000573745 WIZO95785 1651 aa28.9■■■□□ 2.22
CLDN7-206ENST00000573745 SUPT5HO00267 1087 aaKnown RBP28.69■■■□□ 2.18
CLDN7-206ENST00000573745 TOP2AP11388 1531 aaKnown RBP28.63■■■□□ 2.17
CLDN7-206ENST00000573745 CADPSQ9ULU8 1353 aa28.43■■■□□ 2.14
CLDN7-206ENST00000573745 CCDC88BA6NC98 1476 aa28.4■■■□□ 2.14
CLDN7-206ENST00000573745 NESP48681 1621 aa28.39■■■□□ 2.13
CLDN7-206ENST00000573745 LAMC3Q9Y6N6 1575 aa28.3■■■□□ 2.12
CLDN7-206ENST00000573745 PDS5BQ9NTI5 1447 aa28.25■■■□□ 2.11
CLDN7-206ENST00000573745 CFTRP13569 1480 aa28.24■■■□□ 2.11
CLDN7-206ENST00000573745 ERCC6Q03468 1493 aa28.22■■■□□ 2.11
CLDN7-206ENST00000573745 FANCD2Q9BXW9 1451 aa28.02■■■□□ 2.08
CLDN7-206ENST00000573745 CEP164Q9UPV0 1460 aa27.94■■■□□ 2.06
CLDN7-206ENST00000573745 KIF21AQ7Z4S6 1674 aa27.88■■■□□ 2.05
CLDN7-206ENST00000573745 MRC2Q9UBG0 1479 aa27.85■■■□□ 2.05
CLDN7-206ENST00000573745 CUX2O14529 1486 aa27.81■■■□□ 2.04
CLDN7-206ENST00000573745 THOC2Q8NI27 1593 aaKnown RBP27.76■■■□□ 2.03
CLDN7-206ENST00000573745 PRDM2Q13029 1718 aa27.73■■■□□ 2.03
CLDN7-206ENST00000573745 WDR62O43379 1518 aa27.69■■■□□ 2.02
CLDN7-206ENST00000573745 URB2Q14146 1524 aaKnown RBP27.69■■■□□ 2.02
CLDN7-206ENST00000573745 ABCC8Q09428 1581 aa27.65■■■□□ 2.02
CLDN7-206ENST00000573745 TOPBP1Q92547 1522 aa27.57■■■□□ 2
CLDN7-206ENST00000573745 DNMBPQ6XZF7 1577 aa27.51■■□□□ 1.99
CLDN7-206ENST00000573745 WRNQ14191 1432 aaPredicted RBP eCLIP27.43■■□□□ 1.98
CLDN7-206ENST00000573745 CUX1P39880 1505 aa27.43■■□□□ 1.98
CLDN7-206ENST00000573745 IFT140Q96RY7 1462 aa27.38■■□□□ 1.97
CLDN7-206ENST00000573745 SOGA1O94964 1423 aa27.37■■□□□ 1.97
CLDN7-206ENST00000573745 POLA1P09884 1462 aaPredicted RBP27.36■■□□□ 1.97
CLDN7-206ENST00000573745 FGD5Q6ZNL6 1462 aa27.32■■□□□ 1.96
CLDN7-206ENST00000573745 RAD54L2Q9Y4B4 1467 aa27.28■■□□□ 1.96
CLDN7-206ENST00000573745 TOP2BQ02880 1626 aa27.23■■□□□ 1.95
CLDN7-206ENST00000573745 ZNF608Q9ULD9 1512 aaPredicted RBP27.21■■□□□ 1.95
CLDN7-206ENST00000573745 SYNJ1O43426 1573 aa27.21■■□□□ 1.95
CLDN7-206ENST00000573745 TDRD9Q8NDG6 1382 aaKnown RBP27.19■■□□□ 1.94
CLDN7-206ENST00000573745 TARBP1Q13395 1621 aaKnown RBP27.18■■□□□ 1.94
CLDN7-206ENST00000573745 AQRO60306 1485 aaKnown RBP eCLIP27.16■■□□□ 1.94
CLDN7-206ENST00000573745 BIVM-ERCC5R4GMW8 1640 aa27.16■■□□□ 1.94
CLDN7-206ENST00000573745 TRIM41Q8WV44 630 aa27.1■■□□□ 1.93
CLDN7-206ENST00000573745 ABCA10Q8WWZ4 1543 aa27.09■■□□□ 1.93
CLDN7-206ENST00000573745 GAPVD1Q14C86 1478 aa26.99■■□□□ 1.91
CLDN7-206ENST00000573745 EIF4G3O43432 1585 aaKnown RBP26.98■■□□□ 1.91
CLDN7-206ENST00000573745 WDR97A6NE52 1622 aa26.96■■□□□ 1.91
CLDN7-206ENST00000573745 GRIN2BQ13224 1484 aa26.94■■□□□ 1.9
CLDN7-206ENST00000573745 FBLN2P98095 1184 aa26.91■■□□□ 1.9
CLDN7-206ENST00000573745 OSCARQ8IYS5 282 aa26.91■■□□□ 1.9
CLDN7-206ENST00000573745 CHIC1Q5VXU3 224 aa26.9■■□□□ 1.9
CLDN7-206ENST00000573745 CHMP7Q8WUX9 453 aaPredicted RBP26.87■■□□□ 1.89
CLDN7-206ENST00000573745 KIF27Q86VH2 1401 aa26.87■■□□□ 1.89
CLDN7-206ENST00000573745 DNAJC5Q9H3Z4 198 aa26.86■■□□□ 1.89
CLDN7-206ENST00000573745 ABCA5Q8WWZ7 1642 aa26.83■■□□□ 1.89
CLDN7-206ENST00000573745 SNAPC4Q5SXM2 1469 aa26.83■■□□□ 1.89
CLDN7-206ENST00000573745 MAGI1Q96QZ7 1491 aaPredicted RBP26.81■■□□□ 1.88
CLDN7-206ENST00000573745 IGF1RP08069 1367 aa26.79■■□□□ 1.88
CLDN7-206ENST00000573745 ERICH3Q5RHP9 1530 aa26.74■■□□□ 1.87
CLDN7-206ENST00000573745 SYNJ2O15056 1496 aa26.72■■□□□ 1.87
CLDN7-206ENST00000573745 FHAD1B1AJZ9 1412 aa26.71■■□□□ 1.87
CLDN7-206ENST00000573745 PBRM1Q86U86 1689 aa26.68■■□□□ 1.86
CLDN7-206ENST00000573745 RUSC2Q8N2Y8 1516 aa26.65■■□□□ 1.86
CLDN7-206ENST00000573745 CARMIL1Q5VZK9 1371 aa26.62■■□□□ 1.85
CLDN7-206ENST00000573745 GRIN2AQ12879 1464 aa26.56■■□□□ 1.84
CLDN7-206ENST00000573745 ADAMTS12P58397 1594 aa26.56■■□□□ 1.84
CLDN7-206ENST00000573745 CSRNP3Q8WYN3 585 aa26.56■■□□□ 1.84
CLDN7-206ENST00000573745 CHD1O14646 1710 aa26.54■■□□□ 1.84
CLDN7-206ENST00000573745 FAM9AQ8IZU1 332 aaPredicted RBP26.52■■□□□ 1.84
CLDN7-206ENST00000573745 EEA1Q15075 1411 aa26.49■■□□□ 1.83
CLDN7-206ENST00000573745 NUP160Q12769 1436 aa26.46■■□□□ 1.83
CLDN7-206ENST00000573745 CUL7Q14999 1698 aa26.45■■□□□ 1.82
CLDN7-206ENST00000573745 RAPGEF2Q9Y4G8 1499 aa26.42■■□□□ 1.82
CLDN7-206ENST00000573745 PRXQ9BXM0 1461 aa26.37■■□□□ 1.81
CLDN7-206ENST00000573745 JPH4Q96JJ6 628 aa26.37■■□□□ 1.81
CLDN7-206ENST00000573745 CLASP1Q7Z460 1538 aa26.36■■□□□ 1.81
CLDN7-206ENST00000573745 CEP170Q5SW79 1584 aa26.35■■□□□ 1.81
CLDN7-206ENST00000573745 KIAA0586Q9BVV6 1533 aa26.3■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms