RNA–Protein interactions for RNA: ENST00000569300.5

GGA2-216, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 4

Gene GGA2, Length 572 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-216ENST00000569300 NISCHQ9Y2I1 1504 aa13.63□□□□□ -0.23
GGA2-216ENST00000569300 AEBP2Q6ZN18 517 aaPredicted RBP12.78□□□□□ -0.36
GGA2-216ENST00000569300 CHIC1Q5VXU3 224 aa12.39□□□□□ -0.43
GGA2-216ENST00000569300 CCDC180Q9P1Z9 1646 aa12.08□□□□□ -0.48
GGA2-216ENST00000569300 ZCCHC6Q5VYS8 1495 aaKnown RBP11.42□□□□□ -0.58
GGA2-216ENST00000569300 ABCC9O60706 1549 aa11.39□□□□□ -0.59
GGA2-216ENST00000569300 DCAF1Q9Y4B6 1507 aa11.37□□□□□ -0.59
GGA2-216ENST00000569300 MYO15BQ96JP2 1530 aa11.34□□□□□ -0.59
GGA2-216ENST00000569300 NACADO15069 1562 aa11.26□□□□□ -0.61
GGA2-216ENST00000569300 RB1CC1Q8TDY2 1594 aa11.19□□□□□ -0.62
GGA2-216ENST00000569300 DCAF8L2P0C7V8 631 aa11.1□□□□□ -0.63
GGA2-216ENST00000569300 SENP3Q9H4L4 574 aaPredicted RBP10.99□□□□□ -0.65
GGA2-216ENST00000569300 UNC13AQ9UPW8 1703 aa10.95□□□□□ -0.66
GGA2-216ENST00000569300 SCRIBQ14160 1630 aa10.9□□□□□ -0.66
GGA2-216ENST00000569300 SHROOM4Q9ULL8 1493 aa10.83□□□□□ -0.68
GGA2-216ENST00000569300 PHF23Q9BUL5 403 aaPredicted RBP10.82□□□□□ -0.68
GGA2-216ENST00000569300 BICRAQ9NZM4 1560 aa10.82□□□□□ -0.68
GGA2-216ENST00000569300 PABPN1Q86U42 306 aaKnown RBP eCLIP10.64□□□□□ -0.71
GGA2-216ENST00000569300 BAZ1AQ9NRL2 1556 aaPredicted RBP10.56□□□□□ -0.72
GGA2-216ENST00000569300 CECR2Q9BXF3 1484 aa10.53□□□□□ -0.72
GGA2-216ENST00000569300 SMARCA4P51532 1647 aa10.52□□□□□ -0.73
GGA2-216ENST00000569300 EIF4G1Q04637 1599 aaKnown RBP10.5□□□□□ -0.73
GGA2-216ENST00000569300 PEG3Q9GZU2 1588 aa10.48□□□□□ -0.73
GGA2-216ENST00000569300 MROH2BQ7Z745 1585 aa10.47□□□□□ -0.73
GGA2-216ENST00000569300 RSF1Q96T23 1441 aaPredicted RBP10.45□□□□□ -0.74
GGA2-216ENST00000569300 SMARCA2P51531 1590 aa10.42□□□□□ -0.74
GGA2-216ENST00000569300 ATAD2BQ9ULI0 1458 aa10.38□□□□□ -0.75
GGA2-216ENST00000569300 CC2D2AQ9P2K1 1620 aa10.38□□□□□ -0.75
GGA2-216ENST00000569300 WIZO95785 1651 aa10.38□□□□□ -0.75
GGA2-216ENST00000569300 NCAPD3P42695 1498 aa10.37□□□□□ -0.75
GGA2-216ENST00000569300 HMGXB3Q12766 1538 aa10.37□□□□□ -0.75
GGA2-216ENST00000569300 TOP2AP11388 1531 aaKnown RBP10.32□□□□□ -0.76
GGA2-216ENST00000569300 BAZ1BQ9UIG0 1483 aaKnown RBP10.3□□□□□ -0.76
GGA2-216ENST00000569300 SUPT5HO00267 1087 aaKnown RBP10.26□□□□□ -0.77
GGA2-216ENST00000569300 DNAJC5BQ9UF47 199 aa10.18□□□□□ -0.78
GGA2-216ENST00000569300 CCDC88BA6NC98 1476 aa10.16□□□□□ -0.78
GGA2-216ENST00000569300 FOXD1Q16676 465 aa10.14□□□□□ -0.79
GGA2-216ENST00000569300 PRDM2Q13029 1718 aa10.08□□□□□ -0.8
GGA2-216ENST00000569300 LAMC3Q9Y6N6 1575 aa10.06□□□□□ -0.8
GGA2-216ENST00000569300 CFTRP13569 1480 aa10.06□□□□□ -0.8
GGA2-216ENST00000569300 CADPSQ9ULU8 1353 aa10.04□□□□□ -0.8
GGA2-216ENST00000569300 PLPPR3Q6T4P5 718 aa10.03□□□□□ -0.8
GGA2-216ENST00000569300 PDS5BQ9NTI5 1447 aa9.95□□□□□ -0.82
GGA2-216ENST00000569300 NESP48681 1621 aa9.94□□□□□ -0.82
GGA2-216ENST00000569300 FANCD2Q9BXW9 1451 aa9.91□□□□□ -0.82
GGA2-216ENST00000569300 KIF21AQ7Z4S6 1674 aa9.9□□□□□ -0.83
GGA2-216ENST00000569300 CEP164Q9UPV0 1460 aa9.88□□□□□ -0.83
GGA2-216ENST00000569300 ABCC8Q09428 1581 aa9.88□□□□□ -0.83
GGA2-216ENST00000569300 BIVM-ERCC5R4GMW8 1640 aa9.85□□□□□ -0.83
GGA2-216ENST00000569300 WRNQ14191 1432 aaPredicted RBP eCLIP9.85□□□□□ -0.831e-7■■■■■ 66.8
GGA2-216ENST00000569300 TOP2BQ02880 1626 aa9.84□□□□□ -0.83
GGA2-216ENST00000569300 DNMBPQ6XZF7 1577 aa9.84□□□□□ -0.83
GGA2-216ENST00000569300 MRC2Q9UBG0 1479 aa9.82□□□□□ -0.84
GGA2-216ENST00000569300 WDR62O43379 1518 aa9.82□□□□□ -0.84
GGA2-216ENST00000569300 THOC2Q8NI27 1593 aaKnown RBP9.81□□□□□ -0.84
GGA2-216ENST00000569300 ERCC6Q03468 1493 aa9.81□□□□□ -0.84
GGA2-216ENST00000569300 CUX1P39880 1505 aa9.81□□□□□ -0.84
GGA2-216ENST00000569300 SYNJ1O43426 1573 aa9.8□□□□□ -0.84
GGA2-216ENST00000569300 URB2Q14146 1524 aaKnown RBP9.8□□□□□ -0.84
GGA2-216ENST00000569300 TOPBP1Q92547 1522 aa9.8□□□□□ -0.84
GGA2-216ENST00000569300 TRIM41Q8WV44 630 aa9.74□□□□□ -0.85
GGA2-216ENST00000569300 FGD5Q6ZNL6 1462 aa9.73□□□□□ -0.85
GGA2-216ENST00000569300 POLA1P09884 1462 aaPredicted RBP9.72□□□□□ -0.85
GGA2-216ENST00000569300 WDR97A6NE52 1622 aa9.71□□□□□ -0.85
GGA2-216ENST00000569300 CUX2O14529 1486 aa9.7□□□□□ -0.86
GGA2-216ENST00000569300 ABCA10Q8WWZ4 1543 aa9.7□□□□□ -0.86
GGA2-216ENST00000569300 TARBP1Q13395 1621 aaKnown RBP9.7□□□□□ -0.86
GGA2-216ENST00000569300 IFT140Q96RY7 1462 aa9.69□□□□□ -0.86
GGA2-216ENST00000569300 EEA1Q15075 1411 aa9.68□□□□□ -0.86
GGA2-216ENST00000569300 SOGA1O94964 1423 aa9.67□□□□□ -0.86
GGA2-216ENST00000569300 KIF27Q86VH2 1401 aa9.64□□□□□ -0.87
GGA2-216ENST00000569300 ABCA5Q8WWZ7 1642 aa9.64□□□□□ -0.87
GGA2-216ENST00000569300 RAD54L2Q9Y4B4 1467 aa9.63□□□□□ -0.87
GGA2-216ENST00000569300 ADRA2BP18089 450 aa9.6□□□□□ -0.87
GGA2-216ENST00000569300 ERICH3Q5RHP9 1530 aa9.6□□□□□ -0.87
GGA2-216ENST00000569300 PIAS4Q8N2W9 510 aaPredicted RBP9.59□□□□□ -0.87
GGA2-216ENST00000569300 GAPVD1Q14C86 1478 aa9.59□□□□□ -0.87
GGA2-216ENST00000569300 PBRM1Q86U86 1689 aa9.58□□□□□ -0.88
GGA2-216ENST00000569300 PPP6R1Q9UPN7 881 aa9.58□□□□□ -0.88
GGA2-216ENST00000569300 EIF4G3O43432 1585 aaKnown RBP9.58□□□□□ -0.88
GGA2-216ENST00000569300 CUL7Q14999 1698 aa9.57□□□□□ -0.88
GGA2-216ENST00000569300 GRIN2BQ13224 1484 aa9.56□□□□□ -0.88
GGA2-216ENST00000569300 RUSC2Q8N2Y8 1516 aa9.56□□□□□ -0.88
GGA2-216ENST00000569300 ZNF608Q9ULD9 1512 aaPredicted RBP9.56□□□□□ -0.88
GGA2-216ENST00000569300 KIF21BO75037 1637 aa9.55□□□□□ -0.88
GGA2-216ENST00000569300 IGF1RP08069 1367 aa9.54□□□□□ -0.88
GGA2-216ENST00000569300 TDRD9Q8NDG6 1382 aaKnown RBP9.54□□□□□ -0.88
GGA2-216ENST00000569300 CSRNP3Q8WYN3 585 aa9.54□□□□□ -0.88
GGA2-216ENST00000569300 AQRO60306 1485 aaKnown RBP eCLIP9.53□□□□□ -0.883e-8■■■■□ 24
GGA2-216ENST00000569300 MAGI1Q96QZ7 1491 aaPredicted RBP9.53□□□□□ -0.88
GGA2-216ENST00000569300 PRXQ9BXM0 1461 aa9.53□□□□□ -0.88
GGA2-216ENST00000569300 MSH5O43196 834 aa9.52□□□□□ -0.89
GGA2-216ENST00000569300 ADAMTS12P58397 1594 aa9.5□□□□□ -0.89
GGA2-216ENST00000569300 FHAD1B1AJZ9 1412 aa9.49□□□□□ -0.89
GGA2-216ENST00000569300 CARMIL1Q5VZK9 1371 aa9.49□□□□□ -0.89
GGA2-216ENST00000569300 RAPGEF2Q9Y4G8 1499 aa9.48□□□□□ -0.89
GGA2-216ENST00000569300 SYNJ2O15056 1496 aa9.47□□□□□ -0.89
GGA2-216ENST00000569300 GOLGA3Q08378 1498 aa9.47□□□□□ -0.89
GGA2-216ENST00000569300 SNAPC4Q5SXM2 1469 aa9.47□□□□□ -0.89
GGA2-216ENST00000569300 FAM9AQ8IZU1 332 aaPredicted RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 229.2 ms