RNA–Protein interactions for RNA: ENST00000569190.1

CCP110-210, Transcript of centriolar coiled-coil protein 110, humanhuman

TSL 2

Gene CCP110, Length 2,600 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCP110-210ENST00000569190 NISCHQ9Y2I1 1504 aa26.41■■□□□ 1.82
CCP110-210ENST00000569190 CCDC180Q9P1Z9 1646 aa22.79■■□□□ 1.24
CCP110-210ENST00000569190 ZCCHC6Q5VYS8 1495 aaKnown RBP22.33■■□□□ 1.16
CCP110-210ENST00000569190 DCAF1Q9Y4B6 1507 aa21.9■■□□□ 1.1
CCP110-210ENST00000569190 SHROOM4Q9ULL8 1493 aa21.87■■□□□ 1.09
CCP110-210ENST00000569190 ABCC9O60706 1549 aa21.72■■□□□ 1.07
CCP110-210ENST00000569190 DCAF8L2P0C7V8 631 aa21.51■■□□□ 1.03
CCP110-210ENST00000569190 MYO15BQ96JP2 1530 aa21.43■■□□□ 1.02
CCP110-210ENST00000569190 SUPT5HO00267 1087 aaKnown RBP21.36■■□□□ 1.01
CCP110-210ENST00000569190 NACADO15069 1562 aa21.08■□□□□ 0.97
CCP110-210ENST00000569190 SCRIBQ14160 1630 aa20.97■□□□□ 0.95
CCP110-210ENST00000569190 CHIC1Q5VXU3 224 aa20.8■□□□□ 0.92
CCP110-210ENST00000569190 RB1CC1Q8TDY2 1594 aa20.78■□□□□ 0.92
CCP110-210ENST00000569190 RSF1Q96T23 1441 aaPredicted RBP20.7■□□□□ 0.9
CCP110-210ENST00000569190 CECR2Q9BXF3 1484 aa20.41■□□□□ 0.86
CCP110-210ENST00000569190 PABPN1Q86U42 306 aaKnown RBP eCLIP20.4■□□□□ 0.86
CCP110-210ENST00000569190 MROH2BQ7Z745 1585 aa20.39■□□□□ 0.85
CCP110-210ENST00000569190 BAZ1AQ9NRL2 1556 aaPredicted RBP20.37■□□□□ 0.85
CCP110-210ENST00000569190 UNC13AQ9UPW8 1703 aa20.36■□□□□ 0.85
CCP110-210ENST00000569190 WIZO95785 1651 aa20.24■□□□□ 0.83
CCP110-210ENST00000569190 BICRAQ9NZM4 1560 aa20.22■□□□□ 0.83
CCP110-210ENST00000569190 SMARCA4P51532 1647 aa20.17■□□□□ 0.82
CCP110-210ENST00000569190 TOP2AP11388 1531 aaKnown RBP20.12■□□□□ 0.81
CCP110-210ENST00000569190 TRIM41Q8WV44 630 aa20.09■□□□□ 0.81
CCP110-210ENST00000569190 EIF4G1Q04637 1599 aaKnown RBP20.02■□□□□ 0.8
CCP110-210ENST00000569190 LOC105371045A0A1W2PR82 267 aa19.96■□□□□ 0.79
CCP110-210ENST00000569190 PEG3Q9GZU2 1588 aa19.94■□□□□ 0.78
CCP110-210ENST00000569190 SMARCA2P51531 1590 aa19.92■□□□□ 0.78
CCP110-210ENST00000569190 DNAJC5BQ9UF47 199 aa19.89■□□□□ 0.78
CCP110-210ENST00000569190 CCDC88BA6NC98 1476 aa19.88■□□□□ 0.77
CCP110-210ENST00000569190 HRCP23327 699 aa19.79■□□□□ 0.76
CCP110-210ENST00000569190 PCGF6Q9BYE7 350 aa19.73■□□□□ 0.75
CCP110-210ENST00000569190 ATAD2BQ9ULI0 1458 aa19.69■□□□□ 0.74
CCP110-210ENST00000569190 FAM9AQ8IZU1 332 aaPredicted RBP19.66■□□□□ 0.74
CCP110-210ENST00000569190 TRIM26Q12899 539 aaPredicted RBP19.66■□□□□ 0.74
CCP110-210ENST00000569190 ABCC8Q09428 1581 aa19.62■□□□□ 0.73
CCP110-210ENST00000569190 BAZ1BQ9UIG0 1483 aaKnown RBP19.62■□□□□ 0.73
CCP110-210ENST00000569190 EEA1Q15075 1411 aa19.61■□□□□ 0.73
CCP110-210ENST00000569190 CC2D2AQ9P2K1 1620 aa19.57■□□□□ 0.72
CCP110-210ENST00000569190 WRNQ14191 1432 aaPredicted RBP eCLIP19.49■□□□□ 0.71
CCP110-210ENST00000569190 HMGXB3Q12766 1538 aa19.48■□□□□ 0.71
CCP110-210ENST00000569190 NCAPD3P42695 1498 aa19.43■□□□□ 0.7
CCP110-210ENST00000569190 SOGA1O94964 1423 aa19.39■□□□□ 0.69
CCP110-210ENST00000569190 TNIKQ9UKE5 1360 aa19.37■□□□□ 0.69
CCP110-210ENST00000569190 SYNJ1O43426 1573 aa19.35■□□□□ 0.69
CCP110-210ENST00000569190 CSRNP3Q8WYN3 585 aa19.35■□□□□ 0.69
CCP110-210ENST00000569190 GOLGA3Q08378 1498 aa19.32■□□□□ 0.68
CCP110-210ENST00000569190 EHMT2Q96KQ7 1210 aa19.31■□□□□ 0.68
CCP110-210ENST00000569190 PPARGC1BQ86YN6 1023 aaKnown RBP19.3■□□□□ 0.68
CCP110-210ENST00000569190 CEP162Q5TB80 1403 aa19.29■□□□□ 0.68
CCP110-210ENST00000569190 KIF21BO75037 1637 aa19.28■□□□□ 0.68
CCP110-210ENST00000569190 TOP2BQ02880 1626 aa19.27■□□□□ 0.68
CCP110-210ENST00000569190 ZEB1P37275 1124 aaPredicted RBP19.27■□□□□ 0.68
CCP110-210ENST00000569190 CEP164Q9UPV0 1460 aa19.26■□□□□ 0.67
CCP110-210ENST00000569190 RUSC2Q8N2Y8 1516 aa19.25■□□□□ 0.67
CCP110-210ENST00000569190 BIVM-ERCC5R4GMW8 1640 aa19.25■□□□□ 0.67
CCP110-210ENST00000569190 CFTRP13569 1480 aa19.17■□□□□ 0.66
CCP110-210ENST00000569190 UBTFP17480 764 aaKnown RBP19.13■□□□□ 0.65
CCP110-210ENST00000569190 PRDM2Q13029 1718 aa19.11■□□□□ 0.65
CCP110-210ENST00000569190 ERICH3Q5RHP9 1530 aa19.05■□□□□ 0.64
CCP110-210ENST00000569190 CUX1P39880 1505 aa19.04■□□□□ 0.64
CCP110-210ENST00000569190 CLIP1P30622 1438 aa19■□□□□ 0.63
CCP110-210ENST00000569190 RAPGEF2Q9Y4G8 1499 aa18.99■□□□□ 0.63
CCP110-210ENST00000569190 PRXQ9BXM0 1461 aa18.98■□□□□ 0.63
CCP110-210ENST00000569190 CADPSQ9ULU8 1353 aa18.97■□□□□ 0.63
CCP110-210ENST00000569190 KIF27Q86VH2 1401 aa18.97■□□□□ 0.63
CCP110-210ENST00000569190 VPS8Q8N3P4 1428 aa18.94■□□□□ 0.62
CCP110-210ENST00000569190 NESP48681 1621 aa18.85■□□□□ 0.61
CCP110-210ENST00000569190 APLP2Q06481 763 aa18.77■□□□□ 0.6
CCP110-210ENST00000569190 FANCD2Q9BXW9 1451 aa18.75■□□□□ 0.59
CCP110-210ENST00000569190 CCER1Q8TC90 406 aaPredicted RBP18.75■□□□□ 0.59
CCP110-210ENST00000569190 CUX2O14529 1486 aa18.74■□□□□ 0.59
CCP110-210ENST00000569190 FGD5Q6ZNL6 1462 aa18.74■□□□□ 0.59
CCP110-210ENST00000569190 DNMBPQ6XZF7 1577 aa18.72■□□□□ 0.59
CCP110-210ENST00000569190 ARAP1Q96P48 1450 aa18.72■□□□□ 0.59
CCP110-210ENST00000569190 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.7■□□□□ 0.58
CCP110-210ENST00000569190 IGF1RP08069 1367 aa18.69■□□□□ 0.58
CCP110-210ENST00000569190 LAMC3Q9Y6N6 1575 aa18.68■□□□□ 0.58
CCP110-210ENST00000569190 TTBK1Q5TCY1 1321 aaPredicted RBP18.68■□□□□ 0.58
CCP110-210ENST00000569190 ERCC6Q03468 1493 aa18.65■□□□□ 0.58
CCP110-210ENST00000569190 ABCA10Q8WWZ4 1543 aa18.63■□□□□ 0.57
CCP110-210ENST00000569190 TOPBP1Q92547 1522 aa18.62■□□□□ 0.57
CCP110-210ENST00000569190 CARMIL1Q5VZK9 1371 aa18.62■□□□□ 0.57
CCP110-210ENST00000569190 ARHGAP35Q9NRY4 1499 aa18.61■□□□□ 0.57
CCP110-210ENST00000569190 POLA1P09884 1462 aaPredicted RBP18.57■□□□□ 0.56
CCP110-210ENST00000569190 PDS5BQ9NTI5 1447 aa18.57■□□□□ 0.56
CCP110-210ENST00000569190 RANGAP1P46060 587 aaPredicted RBP18.55■□□□□ 0.56
CCP110-210ENST00000569190 MAP3K1Q13233 1512 aa18.55■□□□□ 0.56
CCP110-210ENST00000569190 CUL7Q14999 1698 aa18.55■□□□□ 0.56
CCP110-210ENST00000569190 KIF21AQ7Z4S6 1674 aa18.53■□□□□ 0.56
CCP110-210ENST00000569190 WDR97A6NE52 1622 aa18.49■□□□□ 0.55
CCP110-210ENST00000569190 RRBP1Q9P2E9 1410 aaKnown RBP18.48■□□□□ 0.55
CCP110-210ENST00000569190 RAD54L2Q9Y4B4 1467 aa18.47■□□□□ 0.55
CCP110-210ENST00000569190 FHAD1B1AJZ9 1412 aa18.47■□□□□ 0.55
CCP110-210ENST00000569190 EFCAB5A4FU69 1503 aa18.46■□□□□ 0.55
CCP110-210ENST00000569190 URB2Q14146 1524 aaKnown RBP18.46■□□□□ 0.55
CCP110-210ENST00000569190 HNRNPUL2Q1KMD3 747 aaKnown RBP18.45■□□□□ 0.54
CCP110-210ENST00000569190 TIAM1Q13009 1591 aa18.43■□□□□ 0.54
CCP110-210ENST00000569190 ABCA5Q8WWZ7 1642 aa18.41■□□□□ 0.54
CCP110-210ENST00000569190 CLSPNQ9HAW4 1339 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms