RNA–Protein interactions for RNA: ENST00000566785.5

KATNB1-208, Transcript of katanin regulatory subunit B1, humanhuman

TSL 2

Gene KATNB1, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNB1-208ENST00000566785 NISCHQ9Y2I1 1504 aa36.41■■■■□ 3.42
KATNB1-208ENST00000566785 CCDC180Q9P1Z9 1646 aa32.33■■■□□ 2.77
KATNB1-208ENST00000566785 ABCC9O60706 1549 aa31.26■■■□□ 2.59
KATNB1-208ENST00000566785 ZCCHC6Q5VYS8 1495 aaKnown RBP30.38■■■□□ 2.45
KATNB1-208ENST00000566785 NACADO15069 1562 aa30.32■■■□□ 2.45
KATNB1-208ENST00000566785 RB1CC1Q8TDY2 1594 aa30.29■■■□□ 2.44
KATNB1-208ENST00000566785 MYO15BQ96JP2 1530 aa30.27■■■□□ 2.44
KATNB1-208ENST00000566785 DCAF8L2P0C7V8 631 aa30.25■■■□□ 2.43
KATNB1-208ENST00000566785 DCAF1Q9Y4B6 1507 aa30.21■■■□□ 2.43
KATNB1-208ENST00000566785 UNC13AQ9UPW8 1703 aa29.55■■■□□ 2.32
KATNB1-208ENST00000566785 SCRIBQ14160 1630 aa29.41■■■□□ 2.3
KATNB1-208ENST00000566785 BICRAQ9NZM4 1560 aa29.28■■■□□ 2.28
KATNB1-208ENST00000566785 PABPN1Q86U42 306 aaKnown RBP eCLIP29.21■■■□□ 2.27
KATNB1-208ENST00000566785 SHROOM4Q9ULL8 1493 aa29.15■■■□□ 2.26
KATNB1-208ENST00000566785 EIF4G1Q04637 1599 aaKnown RBP28.52■■■□□ 2.16
KATNB1-208ENST00000566785 DNAJC5BQ9UF47 199 aa28.39■■■□□ 2.14
KATNB1-208ENST00000566785 CC2D2AQ9P2K1 1620 aa28.33■■■□□ 2.13
KATNB1-208ENST00000566785 CECR2Q9BXF3 1484 aa28.26■■■□□ 2.11
KATNB1-208ENST00000566785 BAZ1AQ9NRL2 1556 aaPredicted RBP28.24■■■□□ 2.11
KATNB1-208ENST00000566785 SMARCA4P51532 1647 aa28.2■■■□□ 2.1
KATNB1-208ENST00000566785 SMARCA2P51531 1590 aa28.01■■■□□ 2.07
KATNB1-208ENST00000566785 MROH2BQ7Z745 1585 aa28.01■■■□□ 2.07
KATNB1-208ENST00000566785 ATAD2BQ9ULI0 1458 aa27.97■■■□□ 2.07
KATNB1-208ENST00000566785 PEG3Q9GZU2 1588 aa27.96■■■□□ 2.07
KATNB1-208ENST00000566785 NCAPD3P42695 1498 aa27.95■■■□□ 2.06
KATNB1-208ENST00000566785 HMGXB3Q12766 1538 aa27.85■■■□□ 2.05
KATNB1-208ENST00000566785 RSF1Q96T23 1441 aaPredicted RBP27.8■■■□□ 2.04
KATNB1-208ENST00000566785 BAZ1BQ9UIG0 1483 aaKnown RBP27.77■■■□□ 2.04
KATNB1-208ENST00000566785 WIZO95785 1651 aa27.73■■■□□ 2.03
KATNB1-208ENST00000566785 TOP2AP11388 1531 aaKnown RBP27.51■■□□□ 1.99
KATNB1-208ENST00000566785 SUPT5HO00267 1087 aaKnown RBP27.25■■□□□ 1.95
KATNB1-208ENST00000566785 LAMC3Q9Y6N6 1575 aa27.2■■□□□ 1.94
KATNB1-208ENST00000566785 CCDC88BA6NC98 1476 aa27.14■■□□□ 1.94
KATNB1-208ENST00000566785 CADPSQ9ULU8 1353 aa27.13■■□□□ 1.93
KATNB1-208ENST00000566785 NESP48681 1621 aa27.1■■□□□ 1.93
KATNB1-208ENST00000566785 CFTRP13569 1480 aa27.03■■□□□ 1.92
KATNB1-208ENST00000566785 PDS5BQ9NTI5 1447 aa27■■□□□ 1.91
KATNB1-208ENST00000566785 ERCC6Q03468 1493 aa26.99■■□□□ 1.91
KATNB1-208ENST00000566785 PRDM2Q13029 1718 aa26.9■■□□□ 1.9
KATNB1-208ENST00000566785 KIF21AQ7Z4S6 1674 aa26.85■■□□□ 1.89
KATNB1-208ENST00000566785 FANCD2Q9BXW9 1451 aa26.81■■□□□ 1.88
KATNB1-208ENST00000566785 CEP164Q9UPV0 1460 aa26.78■■□□□ 1.88
KATNB1-208ENST00000566785 THOC2Q8NI27 1593 aaKnown RBP26.71■■□□□ 1.87
KATNB1-208ENST00000566785 MRC2Q9UBG0 1479 aa26.68■■□□□ 1.86
KATNB1-208ENST00000566785 CUX2O14529 1486 aa26.65■■□□□ 1.86
KATNB1-208ENST00000566785 WDR62O43379 1518 aa26.59■■□□□ 1.85
KATNB1-208ENST00000566785 ABCC8Q09428 1581 aa26.53■■□□□ 1.84
KATNB1-208ENST00000566785 URB2Q14146 1524 aaKnown RBP26.49■■□□□ 1.83
KATNB1-208ENST00000566785 DNMBPQ6XZF7 1577 aa26.43■■□□□ 1.82
KATNB1-208ENST00000566785 TOPBP1Q92547 1522 aa26.41■■□□□ 1.82
KATNB1-208ENST00000566785 CUX1P39880 1505 aa26.27■■□□□ 1.8
KATNB1-208ENST00000566785 WRNQ14191 1432 aaPredicted RBP eCLIP26.24■■□□□ 1.79
KATNB1-208ENST00000566785 IFT140Q96RY7 1462 aa26.22■■□□□ 1.79
KATNB1-208ENST00000566785 POLA1P09884 1462 aaPredicted RBP26.19■■□□□ 1.78
KATNB1-208ENST00000566785 BIVM-ERCC5R4GMW8 1640 aa26.17■■□□□ 1.78
KATNB1-208ENST00000566785 TOP2BQ02880 1626 aa26.17■■□□□ 1.78
KATNB1-208ENST00000566785 FGD5Q6ZNL6 1462 aa26.17■■□□□ 1.78
KATNB1-208ENST00000566785 SYNJ1O43426 1573 aa26.12■■□□□ 1.77
KATNB1-208ENST00000566785 SOGA1O94964 1423 aa26.11■■□□□ 1.77
KATNB1-208ENST00000566785 TARBP1Q13395 1621 aaKnown RBP26.1■■□□□ 1.77
KATNB1-208ENST00000566785 RAD54L2Q9Y4B4 1467 aa26.03■■□□□ 1.76
KATNB1-208ENST00000566785 WDR97A6NE52 1622 aa26.03■■□□□ 1.76
KATNB1-208ENST00000566785 ZNF608Q9ULD9 1512 aaPredicted RBP25.98■■□□□ 1.75
KATNB1-208ENST00000566785 ABCA10Q8WWZ4 1543 aa25.96■■□□□ 1.75
KATNB1-208ENST00000566785 EIF4G3O43432 1585 aaKnown RBP25.95■■□□□ 1.75
KATNB1-208ENST00000566785 AQRO60306 1485 aaKnown RBP eCLIP25.88■■□□□ 1.73
KATNB1-208ENST00000566785 TDRD9Q8NDG6 1382 aaKnown RBP25.88■■□□□ 1.73
KATNB1-208ENST00000566785 ABCA5Q8WWZ7 1642 aa25.83■■□□□ 1.73
KATNB1-208ENST00000566785 GAPVD1Q14C86 1478 aa25.81■■□□□ 1.72
KATNB1-208ENST00000566785 GRIN2BQ13224 1484 aa25.79■■□□□ 1.72
KATNB1-208ENST00000566785 TRIM41Q8WV44 630 aa25.79■■□□□ 1.72
KATNB1-208ENST00000566785 PBRM1Q86U86 1689 aa25.76■■□□□ 1.71
KATNB1-208ENST00000566785 MAGI1Q96QZ7 1491 aaPredicted RBP25.72■■□□□ 1.71
KATNB1-208ENST00000566785 KIF27Q86VH2 1401 aa25.7■■□□□ 1.7
KATNB1-208ENST00000566785 ERICH3Q5RHP9 1530 aa25.68■■□□□ 1.7
KATNB1-208ENST00000566785 SNAPC4Q5SXM2 1469 aa25.68■■□□□ 1.7
KATNB1-208ENST00000566785 SYNJ2O15056 1496 aa25.6■■□□□ 1.69
KATNB1-208ENST00000566785 CHIC1Q5VXU3 224 aa25.58■■□□□ 1.69
KATNB1-208ENST00000566785 CHD1O14646 1710 aa25.57■■□□□ 1.68
KATNB1-208ENST00000566785 OSCARQ8IYS5 282 aa25.57■■□□□ 1.68
KATNB1-208ENST00000566785 CHMP7Q8WUX9 453 aaPredicted RBP25.56■■□□□ 1.68
KATNB1-208ENST00000566785 ADAMTS12P58397 1594 aa25.55■■□□□ 1.68
KATNB1-208ENST00000566785 FHAD1B1AJZ9 1412 aa25.54■■□□□ 1.68
KATNB1-208ENST00000566785 FBLN2P98095 1184 aa25.54■■□□□ 1.68
KATNB1-208ENST00000566785 CUL7Q14999 1698 aa25.52■■□□□ 1.68
KATNB1-208ENST00000566785 IGF1RP08069 1367 aa25.51■■□□□ 1.67
KATNB1-208ENST00000566785 DNAJC5Q9H3Z4 198 aa25.48■■□□□ 1.67
KATNB1-208ENST00000566785 GRIN2AQ12879 1464 aa25.44■■□□□ 1.66
KATNB1-208ENST00000566785 EEA1Q15075 1411 aa25.43■■□□□ 1.66
KATNB1-208ENST00000566785 RUSC2Q8N2Y8 1516 aa25.42■■□□□ 1.66
KATNB1-208ENST00000566785 CARMIL1Q5VZK9 1371 aa25.39■■□□□ 1.65
KATNB1-208ENST00000566785 NUP160Q12769 1436 aa25.32■■□□□ 1.64
KATNB1-208ENST00000566785 CLASP1Q7Z460 1538 aa25.31■■□□□ 1.64
KATNB1-208ENST00000566785 RAPGEF2Q9Y4G8 1499 aa25.28■■□□□ 1.64
KATNB1-208ENST00000566785 CEP170Q5SW79 1584 aa25.28■■□□□ 1.64
KATNB1-208ENST00000566785 CSRNP3Q8WYN3 585 aa25.28■■□□□ 1.64
KATNB1-208ENST00000566785 PRXQ9BXM0 1461 aa25.24■■□□□ 1.63
KATNB1-208ENST00000566785 KIAA0586Q9BVV6 1533 aa25.17■■□□□ 1.62
KATNB1-208ENST00000566785 FAM9AQ8IZU1 332 aaPredicted RBP25.15■■□□□ 1.62
KATNB1-208ENST00000566785 ARHGEF11O15085 1522 aa25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms