RNA–Protein interactions for RNA: ENST00000566533.5

MIR3976HG-202, Transcript of MIR3976 host gene, humanhuman

TSL 1 (best) BASIC

Gene MIR3976HG, Length 1,690 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR3976HG-202ENST00000566533 AEBP2Q6ZN18 517 aaPredicted RBP21.76■■□□□ 1.07
MIR3976HG-202ENST00000566533 NISCHQ9Y2I1 1504 aa21.01■□□□□ 0.95
MIR3976HG-202ENST00000566533 CHIC1Q5VXU3 224 aa20.71■□□□□ 0.91
MIR3976HG-202ENST00000566533 POTEDQ86YR6 584 aa19.39■□□□□ 0.69
MIR3976HG-202ENST00000566533 SENP3Q9H4L4 574 aaPredicted RBP18.86■□□□□ 0.61
MIR3976HG-202ENST00000566533 CCDC180Q9P1Z9 1646 aa18.5■□□□□ 0.55
MIR3976HG-202ENST00000566533 PHF23Q9BUL5 403 aaPredicted RBP18.38■□□□□ 0.53
MIR3976HG-202ENST00000566533 ABCC9O60706 1549 aa17.88■□□□□ 0.45
MIR3976HG-202ENST00000566533 FOXD1Q16676 465 aa17.74■□□□□ 0.43
MIR3976HG-202ENST00000566533 ZCCHC6Q5VYS8 1495 aaKnown RBP17.58■□□□□ 0.41
MIR3976HG-202ENST00000566533 DCAF8L2P0C7V8 631 aa17.43■□□□□ 0.38
MIR3976HG-202ENST00000566533 DCAF1Q9Y4B6 1507 aa17.33■□□□□ 0.36
MIR3976HG-202ENST00000566533 NACADO15069 1562 aa17.29■□□□□ 0.36
MIR3976HG-202ENST00000566533 MYO15BQ96JP2 1530 aa17.27■□□□□ 0.35
MIR3976HG-202ENST00000566533 RB1CC1Q8TDY2 1594 aa17.25■□□□□ 0.35
MIR3976HG-202ENST00000566533 MSH5O43196 834 aa17.23■□□□□ 0.35
MIR3976HG-202ENST00000566533 SCRIBQ14160 1630 aa17■□□□□ 0.31
MIR3976HG-202ENST00000566533 UNC13AQ9UPW8 1703 aa16.99■□□□□ 0.31
MIR3976HG-202ENST00000566533 SHROOM4Q9ULL8 1493 aa16.89■□□□□ 0.29
MIR3976HG-202ENST00000566533 BICRAQ9NZM4 1560 aa16.82■□□□□ 0.28
MIR3976HG-202ENST00000566533 PLPPR3Q6T4P5 718 aa16.78■□□□□ 0.28
MIR3976HG-202ENST00000566533 PABPN1Q86U42 306 aaKnown RBP eCLIP16.77■□□□□ 0.28
MIR3976HG-202ENST00000566533 CECR2Q9BXF3 1484 aa16.4■□□□□ 0.22
MIR3976HG-202ENST00000566533 EIF4G1Q04637 1599 aaKnown RBP16.3■□□□□ 0.2
MIR3976HG-202ENST00000566533 MROH2BQ7Z745 1585 aa16.26■□□□□ 0.19
MIR3976HG-202ENST00000566533 SMARCA4P51532 1647 aa16.25■□□□□ 0.19
MIR3976HG-202ENST00000566533 BAZ1AQ9NRL2 1556 aaPredicted RBP16.23■□□□□ 0.19
MIR3976HG-202ENST00000566533 PIAS4Q8N2W9 510 aaPredicted RBP16.21■□□□□ 0.18
MIR3976HG-202ENST00000566533 CC2D2AQ9P2K1 1620 aa16.17■□□□□ 0.18
MIR3976HG-202ENST00000566533 DNAJC5BQ9UF47 199 aa16.17■□□□□ 0.18
MIR3976HG-202ENST00000566533 RSF1Q96T23 1441 aaPredicted RBP16.15■□□□□ 0.18
MIR3976HG-202ENST00000566533 WIZO95785 1651 aa16.11■□□□□ 0.17
MIR3976HG-202ENST00000566533 PPP6R1Q9UPN7 881 aa16.1■□□□□ 0.17
MIR3976HG-202ENST00000566533 ADRA2BP18089 450 aa16.08■□□□□ 0.17
MIR3976HG-202ENST00000566533 ATAD2BQ9ULI0 1458 aa16.06■□□□□ 0.16
MIR3976HG-202ENST00000566533 PEG3Q9GZU2 1588 aa16.05■□□□□ 0.16
MIR3976HG-202ENST00000566533 SMARCA2P51531 1590 aa16.02■□□□□ 0.15
MIR3976HG-202ENST00000566533 SUPT5HO00267 1087 aaKnown RBP16■□□□□ 0.15
MIR3976HG-202ENST00000566533 NCAPD3P42695 1498 aa15.97■□□□□ 0.15
MIR3976HG-202ENST00000566533 BAZ1BQ9UIG0 1483 aaKnown RBP15.94■□□□□ 0.14
MIR3976HG-202ENST00000566533 HMGXB3Q12766 1538 aa15.93■□□□□ 0.14
MIR3976HG-202ENST00000566533 TOP2AP11388 1531 aaKnown RBP15.88■□□□□ 0.13
MIR3976HG-202ENST00000566533 CCDC88BA6NC98 1476 aa15.73■□□□□ 0.11
MIR3976HG-202ENST00000566533 CACNB1Q02641 598 aaPredicted RBP15.71■□□□□ 0.11
MIR3976HG-202ENST00000566533 NESP48681 1621 aa15.61■□□□□ 0.09
MIR3976HG-202ENST00000566533 CADPSQ9ULU8 1353 aa15.53■□□□□ 0.08
MIR3976HG-202ENST00000566533 CFTRP13569 1480 aa15.52■□□□□ 0.08
MIR3976HG-202ENST00000566533 LAMC3Q9Y6N6 1575 aa15.5■□□□□ 0.07
MIR3976HG-202ENST00000566533 PRDM2Q13029 1718 aa15.44■□□□□ 0.06
MIR3976HG-202ENST00000566533 KIF21AQ7Z4S6 1674 aa15.42■□□□□ 0.06
MIR3976HG-202ENST00000566533 FANCD2Q9BXW9 1451 aa15.38■□□□□ 0.05
MIR3976HG-202ENST00000566533 PDS5BQ9NTI5 1447 aa15.34■□□□□ 0.05
MIR3976HG-202ENST00000566533 ERCC6Q03468 1493 aa15.32■□□□□ 0.04
MIR3976HG-202ENST00000566533 ABCC8Q09428 1581 aa15.31■□□□□ 0.04
MIR3976HG-202ENST00000566533 CEP164Q9UPV0 1460 aa15.3■□□□□ 0.04
MIR3976HG-202ENST00000566533 THOC2Q8NI27 1593 aaKnown RBP15.26■□□□□ 0.03
MIR3976HG-202ENST00000566533 URB2Q14146 1524 aaKnown RBP15.25■□□□□ 0.03
MIR3976HG-202ENST00000566533 MRC2Q9UBG0 1479 aa15.22■□□□□ 0.03
MIR3976HG-202ENST00000566533 CUX1P39880 1505 aa15.22■□□□□ 0.03
MIR3976HG-202ENST00000566533 SYNJ1O43426 1573 aa15.21■□□□□ 0.03
MIR3976HG-202ENST00000566533 WRNQ14191 1432 aaPredicted RBP eCLIP15.19■□□□□ 0.02
MIR3976HG-202ENST00000566533 WDR62O43379 1518 aa15.18■□□□□ 0.02
MIR3976HG-202ENST00000566533 TOPBP1Q92547 1522 aa15.18■□□□□ 0.02
MIR3976HG-202ENST00000566533 DNMBPQ6XZF7 1577 aa15.17■□□□□ 0.02
MIR3976HG-202ENST00000566533 TOP2BQ02880 1626 aa15.13■□□□□ 0.01
MIR3976HG-202ENST00000566533 BIVM-ERCC5R4GMW8 1640 aa15.13■□□□□ 0.01
MIR3976HG-202ENST00000566533 FGD5Q6ZNL6 1462 aa15.09■□□□□ 0.01
MIR3976HG-202ENST00000566533 POLA1P09884 1462 aaPredicted RBP15.08■□□□□ 0
MIR3976HG-202ENST00000566533 CUX2O14529 1486 aa15.07■□□□□ 0
MIR3976HG-202ENST00000566533 RAD54L2Q9Y4B4 1467 aa15.05■□□□□ -0
MIR3976HG-202ENST00000566533 TRIM41Q8WV44 630 aa15.03■□□□□ -0
MIR3976HG-202ENST00000566533 TARBP1Q13395 1621 aaKnown RBP15.01□□□□□ -0.01
MIR3976HG-202ENST00000566533 SOGA1O94964 1423 aa14.98□□□□□ -0.01
MIR3976HG-202ENST00000566533 WDR97A6NE52 1622 aa14.98□□□□□ -0.01
MIR3976HG-202ENST00000566533 ZNF608Q9ULD9 1512 aaPredicted RBP14.96□□□□□ -0.01
MIR3976HG-202ENST00000566533 IFT140Q96RY7 1462 aa14.96□□□□□ -0.02
MIR3976HG-202ENST00000566533 ABCA10Q8WWZ4 1543 aa14.93□□□□□ -0.02
MIR3976HG-202ENST00000566533 TDRD9Q8NDG6 1382 aaKnown RBP14.91□□□□□ -0.02
MIR3976HG-202ENST00000566533 RUSC2Q8N2Y8 1516 aa14.91□□□□□ -0.02
MIR3976HG-202ENST00000566533 EIF4G3O43432 1585 aaKnown RBP14.9□□□□□ -0.02
MIR3976HG-202ENST00000566533 AQRO60306 1485 aaKnown RBP eCLIP14.9□□□□□ -0.02
MIR3976HG-202ENST00000566533 POTEHQ6S545 545 aa14.9□□□□□ -0.02
MIR3976HG-202ENST00000566533 ABCA5Q8WWZ7 1642 aa14.88□□□□□ -0.03
MIR3976HG-202ENST00000566533 GAPVD1Q14C86 1478 aa14.82□□□□□ -0.04
MIR3976HG-202ENST00000566533 PBRM1Q86U86 1689 aa14.82□□□□□ -0.04
MIR3976HG-202ENST00000566533 KIF27Q86VH2 1401 aa14.81□□□□□ -0.04
MIR3976HG-202ENST00000566533 FAM9AQ8IZU1 332 aaPredicted RBP14.8□□□□□ -0.04
MIR3976HG-202ENST00000566533 GRIN2BQ13224 1484 aa14.76□□□□□ -0.05
MIR3976HG-202ENST00000566533 SNAPC4Q5SXM2 1469 aa14.75□□□□□ -0.05
MIR3976HG-202ENST00000566533 PPP4R3CPQ6ZMV5 832 aa14.75□□□□□ -0.05
MIR3976HG-202ENST00000566533 IGF1RP08069 1367 aa14.74□□□□□ -0.05
MIR3976HG-202ENST00000566533 SCAF1Q9H7N4 1312 aaKnown RBP14.74□□□□□ -0.05
MIR3976HG-202ENST00000566533 ERICH3Q5RHP9 1530 aa14.73□□□□□ -0.05
MIR3976HG-202ENST00000566533 ADAMTS12P58397 1594 aa14.72□□□□□ -0.05
MIR3976HG-202ENST00000566533 DMRT2Q9Y5R5 561 aa14.71□□□□□ -0.05
MIR3976HG-202ENST00000566533 EEA1Q15075 1411 aa14.69□□□□□ -0.06
MIR3976HG-202ENST00000566533 MAGI1Q96QZ7 1491 aaPredicted RBP14.68□□□□□ -0.06
MIR3976HG-202ENST00000566533 CSRNP3Q8WYN3 585 aa14.68□□□□□ -0.06
MIR3976HG-202ENST00000566533 CUL7Q14999 1698 aa14.67□□□□□ -0.06
MIR3976HG-202ENST00000566533 CHD1O14646 1710 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms