RNA–Protein interactions for RNA: ENST00000566468.1

ARID3B-204, Transcript of AT-rich interaction domain 3B, humanhuman

TSL 1 (best)

Gene ARID3B, Length 692 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3B-204ENST00000566468 NISCHQ9Y2I1 1504 aa42.36■■■■■ 4.37
ARID3B-204ENST00000566468 CCDC180Q9P1Z9 1646 aa37.6■■■■□ 3.61
ARID3B-204ENST00000566468 ABCC9O60706 1549 aa36.48■■■■□ 3.43
ARID3B-204ENST00000566468 NACADO15069 1562 aa35.34■■■■□ 3.25
ARID3B-204ENST00000566468 ZCCHC6Q5VYS8 1495 aaKnown RBP35.34■■■■□ 3.25
ARID3B-204ENST00000566468 RB1CC1Q8TDY2 1594 aa35.3■■■■□ 3.24
ARID3B-204ENST00000566468 MYO15BQ96JP2 1530 aa35.27■■■■□ 3.24
ARID3B-204ENST00000566468 DCAF1Q9Y4B6 1507 aa35.16■■■■□ 3.22
ARID3B-204ENST00000566468 DCAF8L2P0C7V8 631 aa35.16■■■■□ 3.22
ARID3B-204ENST00000566468 UNC13AQ9UPW8 1703 aa34.34■■■■□ 3.09
ARID3B-204ENST00000566468 SCRIBQ14160 1630 aa34.19■■■■□ 3.06
ARID3B-204ENST00000566468 BICRAQ9NZM4 1560 aa34.14■■■■□ 3.06
ARID3B-204ENST00000566468 PABPN1Q86U42 306 aaKnown RBP eCLIP34.08■■■■□ 3.05
ARID3B-204ENST00000566468 SHROOM4Q9ULL8 1493 aa34.02■■■■□ 3.04
ARID3B-204ENST00000566468 DNAJC5BQ9UF47 199 aa33.27■■■□□ 2.92
ARID3B-204ENST00000566468 EIF4G1Q04637 1599 aaKnown RBP33.26■■■□□ 2.91
ARID3B-204ENST00000566468 CC2D2AQ9P2K1 1620 aa33.04■■■□□ 2.88
ARID3B-204ENST00000566468 CECR2Q9BXF3 1484 aa32.88■■■□□ 2.85
ARID3B-204ENST00000566468 BAZ1AQ9NRL2 1556 aaPredicted RBP32.85■■■□□ 2.85
ARID3B-204ENST00000566468 SMARCA4P51532 1647 aa32.79■■■□□ 2.84
ARID3B-204ENST00000566468 SMARCA2P51531 1590 aa32.62■■■□□ 2.81
ARID3B-204ENST00000566468 NCAPD3P42695 1498 aa32.61■■■□□ 2.81
ARID3B-204ENST00000566468 ATAD2BQ9ULI0 1458 aa32.61■■■□□ 2.81
ARID3B-204ENST00000566468 MROH2BQ7Z745 1585 aa32.58■■■□□ 2.81
ARID3B-204ENST00000566468 PEG3Q9GZU2 1588 aa32.56■■■□□ 2.8
ARID3B-204ENST00000566468 HMGXB3Q12766 1538 aa32.46■■■□□ 2.79
ARID3B-204ENST00000566468 BAZ1BQ9UIG0 1483 aaKnown RBP32.33■■■□□ 2.77
ARID3B-204ENST00000566468 RSF1Q96T23 1441 aaPredicted RBP32.32■■■□□ 2.76
ARID3B-204ENST00000566468 WIZO95785 1651 aa32.19■■■□□ 2.74
ARID3B-204ENST00000566468 TOP2AP11388 1531 aaKnown RBP31.97■■■□□ 2.71
ARID3B-204ENST00000566468 LAMC3Q9Y6N6 1575 aa31.69■■■□□ 2.66
ARID3B-204ENST00000566468 CADPSQ9ULU8 1353 aa31.64■■■□□ 2.66
ARID3B-204ENST00000566468 NESP48681 1621 aa31.6■■■□□ 2.65
ARID3B-204ENST00000566468 CCDC88BA6NC98 1476 aa31.56■■■□□ 2.64
ARID3B-204ENST00000566468 SUPT5HO00267 1087 aaKnown RBP31.53■■■□□ 2.64
ARID3B-204ENST00000566468 PDS5BQ9NTI5 1447 aa31.5■■■□□ 2.63
ARID3B-204ENST00000566468 CFTRP13569 1480 aa31.5■■■□□ 2.63
ARID3B-204ENST00000566468 ERCC6Q03468 1493 aa31.49■■■□□ 2.63
ARID3B-204ENST00000566468 FANCD2Q9BXW9 1451 aa31.24■■■□□ 2.59
ARID3B-204ENST00000566468 KIF21AQ7Z4S6 1674 aa31.22■■■□□ 2.59
ARID3B-204ENST00000566468 PRDM2Q13029 1718 aa31.21■■■□□ 2.59
ARID3B-204ENST00000566468 CEP164Q9UPV0 1460 aa31.2■■■□□ 2.58
ARID3B-204ENST00000566468 CUX2O14529 1486 aa31.18■■■□□ 2.58
ARID3B-204ENST00000566468 THOC2Q8NI27 1593 aaKnown RBP31.15■■■□□ 2.58
ARID3B-204ENST00000566468 MRC2Q9UBG0 1479 aa31.12■■■□□ 2.57
ARID3B-204ENST00000566468 WDR62O43379 1518 aa31.01■■■□□ 2.55
ARID3B-204ENST00000566468 URB2Q14146 1524 aaKnown RBP30.88■■■□□ 2.53
ARID3B-204ENST00000566468 ABCC8Q09428 1581 aa30.88■■■□□ 2.53
ARID3B-204ENST00000566468 TOPBP1Q92547 1522 aa30.76■■■□□ 2.51
ARID3B-204ENST00000566468 DNMBPQ6XZF7 1577 aa30.75■■■□□ 2.51
ARID3B-204ENST00000566468 IFT140Q96RY7 1462 aa30.57■■■□□ 2.48
ARID3B-204ENST00000566468 CUX1P39880 1505 aa30.56■■■□□ 2.48
ARID3B-204ENST00000566468 POLA1P09884 1462 aaPredicted RBP30.5■■■□□ 2.47
ARID3B-204ENST00000566468 WRNQ14191 1432 aaPredicted RBP eCLIP30.49■■■□□ 2.47
ARID3B-204ENST00000566468 FGD5Q6ZNL6 1462 aa30.44■■■□□ 2.46
ARID3B-204ENST00000566468 SOGA1O94964 1423 aa30.39■■■□□ 2.46
ARID3B-204ENST00000566468 TOP2BQ02880 1626 aa30.39■■■□□ 2.46
ARID3B-204ENST00000566468 TARBP1Q13395 1621 aaKnown RBP30.39■■■□□ 2.46
ARID3B-204ENST00000566468 BIVM-ERCC5R4GMW8 1640 aa30.37■■■□□ 2.45
ARID3B-204ENST00000566468 SYNJ1O43426 1573 aa30.32■■■□□ 2.45
ARID3B-204ENST00000566468 RAD54L2Q9Y4B4 1467 aa30.31■■■□□ 2.44
ARID3B-204ENST00000566468 WDR97A6NE52 1622 aa30.3■■■□□ 2.44
ARID3B-204ENST00000566468 ZNF608Q9ULD9 1512 aaPredicted RBP30.3■■■□□ 2.44
ARID3B-204ENST00000566468 ABCA10Q8WWZ4 1543 aa30.22■■■□□ 2.43
ARID3B-204ENST00000566468 EIF4G3O43432 1585 aaKnown RBP30.22■■■□□ 2.43
ARID3B-204ENST00000566468 AQRO60306 1485 aaKnown RBP eCLIP30.16■■■□□ 2.42
ARID3B-204ENST00000566468 TDRD9Q8NDG6 1382 aaKnown RBP30.15■■■□□ 2.42
ARID3B-204ENST00000566468 GRIN2BQ13224 1484 aa30.05■■■□□ 2.4
ARID3B-204ENST00000566468 GAPVD1Q14C86 1478 aa30.05■■■□□ 2.4
ARID3B-204ENST00000566468 ABCA5Q8WWZ7 1642 aa30.04■■■□□ 2.4
ARID3B-204ENST00000566468 MAGI1Q96QZ7 1491 aaPredicted RBP29.98■■■□□ 2.39
ARID3B-204ENST00000566468 DNAJC5Q9H3Z4 198 aa29.94■■■□□ 2.38
ARID3B-204ENST00000566468 SNAPC4Q5SXM2 1469 aa29.92■■■□□ 2.38
ARID3B-204ENST00000566468 PBRM1Q86U86 1689 aa29.91■■■□□ 2.38
ARID3B-204ENST00000566468 ERICH3Q5RHP9 1530 aa29.89■■■□□ 2.38
ARID3B-204ENST00000566468 OSCARQ8IYS5 282 aa29.88■■■□□ 2.37
ARID3B-204ENST00000566468 KIF27Q86VH2 1401 aa29.87■■■□□ 2.37
ARID3B-204ENST00000566468 TRIM41Q8WV44 630 aa29.86■■■□□ 2.37
ARID3B-204ENST00000566468 SYNJ2O15056 1496 aa29.83■■■□□ 2.37
ARID3B-204ENST00000566468 CHMP7Q8WUX9 453 aaPredicted RBP29.77■■■□□ 2.36
ARID3B-204ENST00000566468 FHAD1B1AJZ9 1412 aa29.75■■■□□ 2.35
ARID3B-204ENST00000566468 CHD1O14646 1710 aa29.74■■■□□ 2.35
ARID3B-204ENST00000566468 FBLN2P98095 1184 aa29.74■■■□□ 2.35
ARID3B-204ENST00000566468 ADAMTS12P58397 1594 aa29.73■■■□□ 2.35
ARID3B-204ENST00000566468 IGF1RP08069 1367 aa29.69■■■□□ 2.34
ARID3B-204ENST00000566468 GRIN2AQ12879 1464 aa29.64■■■□□ 2.34
ARID3B-204ENST00000566468 CUL7Q14999 1698 aa29.62■■■□□ 2.33
ARID3B-204ENST00000566468 CHIC1Q5VXU3 224 aa29.59■■■□□ 2.33
ARID3B-204ENST00000566468 CLASP1Q7Z460 1538 aa29.53■■■□□ 2.32
ARID3B-204ENST00000566468 NUP160Q12769 1436 aa29.53■■■□□ 2.32
ARID3B-204ENST00000566468 CARMIL1Q5VZK9 1371 aa29.52■■■□□ 2.32
ARID3B-204ENST00000566468 EEA1Q15075 1411 aa29.49■■■□□ 2.31
ARID3B-204ENST00000566468 RUSC2Q8N2Y8 1516 aa29.49■■■□□ 2.31
ARID3B-204ENST00000566468 CEP170Q5SW79 1584 aa29.43■■■□□ 2.3
ARID3B-204ENST00000566468 RAPGEF2Q9Y4G8 1499 aa29.38■■■□□ 2.29
ARID3B-204ENST00000566468 ARHGEF11O15085 1522 aa29.35■■■□□ 2.29
ARID3B-204ENST00000566468 PRXQ9BXM0 1461 aa29.33■■■□□ 2.29
ARID3B-204ENST00000566468 CSRNP3Q8WYN3 585 aa29.32■■■□□ 2.28
ARID3B-204ENST00000566468 KIAA0586Q9BVV6 1533 aa29.3■■■□□ 2.28
ARID3B-204ENST00000566468 RIMBP3CA6NJZ7 1639 aa29.29■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms