RNA–Protein interactions for RNA: ENST00000566464.5

CSK-207, Transcript of C-terminal Src kinase, humanhuman

TSL 3

Gene CSK, Length 459 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSK-207ENST00000566464 NISCHQ9Y2I1 1504 aa48.61■■■■■ 5.37
CSK-207ENST00000566464 CCDC180Q9P1Z9 1646 aa42.92■■■■■ 4.46
CSK-207ENST00000566464 ABCC9O60706 1549 aa41.73■■■■■ 4.27
CSK-207ENST00000566464 ZCCHC6Q5VYS8 1495 aaKnown RBP40.53■■■■■ 4.08
CSK-207ENST00000566464 DCAF8L2P0C7V8 631 aa40.51■■■■■ 4.08
CSK-207ENST00000566464 NACADO15069 1562 aa40.35■■■■■ 4.05
CSK-207ENST00000566464 MYO15BQ96JP2 1530 aa40.29■■■■■ 4.04
CSK-207ENST00000566464 RB1CC1Q8TDY2 1594 aa40.27■■■■■ 4.04
CSK-207ENST00000566464 DCAF1Q9Y4B6 1507 aa40.25■■■■■ 4.03
CSK-207ENST00000566464 UNC13AQ9UPW8 1703 aa39.28■■■■□ 3.88
CSK-207ENST00000566464 SCRIBQ14160 1630 aa39.19■■■■□ 3.86
CSK-207ENST00000566464 PABPN1Q86U42 306 aaKnown RBP eCLIP39.15■■■■□ 3.86
CSK-207ENST00000566464 BICRAQ9NZM4 1560 aa39.08■■■■□ 3.85
CSK-207ENST00000566464 SHROOM4Q9ULL8 1493 aa38.67■■■■□ 3.78
CSK-207ENST00000566464 DNAJC5BQ9UF47 199 aa38.13■■■■□ 3.69
CSK-207ENST00000566464 EIF4G1Q04637 1599 aaKnown RBP37.99■■■■□ 3.67
CSK-207ENST00000566464 CECR2Q9BXF3 1484 aa37.85■■■■□ 3.65
CSK-207ENST00000566464 CC2D2AQ9P2K1 1620 aa37.73■■■■□ 3.63
CSK-207ENST00000566464 BAZ1AQ9NRL2 1556 aaPredicted RBP37.59■■■■□ 3.61
CSK-207ENST00000566464 SMARCA4P51532 1647 aa37.57■■■■□ 3.6
CSK-207ENST00000566464 MROH2BQ7Z745 1585 aa37.46■■■■□ 3.59
CSK-207ENST00000566464 ATAD2BQ9ULI0 1458 aa37.36■■■■□ 3.57
CSK-207ENST00000566464 NCAPD3P42695 1498 aa37.32■■■■□ 3.56
CSK-207ENST00000566464 SMARCA2P51531 1590 aa37.25■■■■□ 3.55
CSK-207ENST00000566464 PEG3Q9GZU2 1588 aa37.24■■■■□ 3.55
CSK-207ENST00000566464 RSF1Q96T23 1441 aaPredicted RBP37.22■■■■□ 3.55
CSK-207ENST00000566464 HMGXB3Q12766 1538 aa37.05■■■■□ 3.52
CSK-207ENST00000566464 WIZO95785 1651 aa37.02■■■■□ 3.52
CSK-207ENST00000566464 BAZ1BQ9UIG0 1483 aaKnown RBP37.01■■■■□ 3.51
CSK-207ENST00000566464 TOP2AP11388 1531 aaKnown RBP36.65■■■■□ 3.46
CSK-207ENST00000566464 SUPT5HO00267 1087 aaKnown RBP36.56■■■■□ 3.44
CSK-207ENST00000566464 CCDC88BA6NC98 1476 aa36.31■■■■□ 3.4
CSK-207ENST00000566464 CADPSQ9ULU8 1353 aa36.25■■■■□ 3.39
CSK-207ENST00000566464 NESP48681 1621 aa36.23■■■■□ 3.39
CSK-207ENST00000566464 LAMC3Q9Y6N6 1575 aa36.16■■■■□ 3.38
CSK-207ENST00000566464 CFTRP13569 1480 aa36.08■■■■□ 3.37
CSK-207ENST00000566464 PDS5BQ9NTI5 1447 aa35.98■■■■□ 3.35
CSK-207ENST00000566464 ERCC6Q03468 1493 aa35.88■■■■□ 3.33
CSK-207ENST00000566464 FANCD2Q9BXW9 1451 aa35.76■■■■□ 3.32
CSK-207ENST00000566464 KIF21AQ7Z4S6 1674 aa35.7■■■■□ 3.31
CSK-207ENST00000566464 CEP164Q9UPV0 1460 aa35.64■■■■□ 3.3
CSK-207ENST00000566464 PRDM2Q13029 1718 aa35.63■■■■□ 3.29
CSK-207ENST00000566464 MRC2Q9UBG0 1479 aa35.53■■■■□ 3.28
CSK-207ENST00000566464 THOC2Q8NI27 1593 aaKnown RBP35.52■■■■□ 3.28
CSK-207ENST00000566464 CUX2O14529 1486 aa35.41■■■■□ 3.26
CSK-207ENST00000566464 WDR62O43379 1518 aa35.38■■■■□ 3.25
CSK-207ENST00000566464 URB2Q14146 1524 aaKnown RBP35.38■■■■□ 3.25
CSK-207ENST00000566464 ABCC8Q09428 1581 aa35.27■■■■□ 3.24
CSK-207ENST00000566464 TOPBP1Q92547 1522 aa35.23■■■■□ 3.23
CSK-207ENST00000566464 DNMBPQ6XZF7 1577 aa35.18■■■■□ 3.22
CSK-207ENST00000566464 CUX1P39880 1505 aa35.11■■■■□ 3.21
CSK-207ENST00000566464 WRNQ14191 1432 aaPredicted RBP eCLIP35.04■■■■□ 3.2
CSK-207ENST00000566464 POLA1P09884 1462 aaPredicted RBP34.96■■■■□ 3.19
CSK-207ENST00000566464 FGD5Q6ZNL6 1462 aa34.91■■■■□ 3.18
CSK-207ENST00000566464 IFT140Q96RY7 1462 aa34.91■■■■□ 3.18
CSK-207ENST00000566464 SOGA1O94964 1423 aa34.88■■■■□ 3.17
CSK-207ENST00000566464 TOP2BQ02880 1626 aa34.88■■■■□ 3.17
CSK-207ENST00000566464 SYNJ1O43426 1573 aa34.87■■■■□ 3.17
CSK-207ENST00000566464 BIVM-ERCC5R4GMW8 1640 aa34.84■■■■□ 3.17
CSK-207ENST00000566464 RAD54L2Q9Y4B4 1467 aa34.83■■■■□ 3.17
CSK-207ENST00000566464 TARBP1Q13395 1621 aaKnown RBP34.8■■■■□ 3.16
CSK-207ENST00000566464 ZNF608Q9ULD9 1512 aaPredicted RBP34.74■■■■□ 3.15
CSK-207ENST00000566464 TDRD9Q8NDG6 1382 aaKnown RBP34.63■■■■□ 3.13
CSK-207ENST00000566464 AQRO60306 1485 aaKnown RBP eCLIP34.63■■■■□ 3.13
CSK-207ENST00000566464 ABCA10Q8WWZ4 1543 aa34.62■■■■□ 3.13
CSK-207ENST00000566464 TRIM41Q8WV44 630 aa34.54■■■■□ 3.12
CSK-207ENST00000566464 WDR97A6NE52 1622 aa34.52■■■■□ 3.12
CSK-207ENST00000566464 EIF4G3O43432 1585 aaKnown RBP34.51■■■■□ 3.12
CSK-207ENST00000566464 GAPVD1Q14C86 1478 aa34.44■■■■□ 3.1
CSK-207ENST00000566464 CHIC1Q5VXU3 224 aa34.42■■■■□ 3.1
CSK-207ENST00000566464 GRIN2BQ13224 1484 aa34.38■■■■□ 3.09
CSK-207ENST00000566464 ABCA5Q8WWZ7 1642 aa34.37■■■■□ 3.09
CSK-207ENST00000566464 KIF27Q86VH2 1401 aa34.28■■■■□ 3.08
CSK-207ENST00000566464 SNAPC4Q5SXM2 1469 aa34.24■■■■□ 3.07
CSK-207ENST00000566464 MAGI1Q96QZ7 1491 aaPredicted RBP34.22■■■■□ 3.07
CSK-207ENST00000566464 IGF1RP08069 1367 aa34.2■■■■□ 3.07
CSK-207ENST00000566464 PBRM1Q86U86 1689 aa34.19■■■■□ 3.06
CSK-207ENST00000566464 ERICH3Q5RHP9 1530 aa34.19■■■■□ 3.06
CSK-207ENST00000566464 OSCARQ8IYS5 282 aa34.14■■■■□ 3.06
CSK-207ENST00000566464 FBLN2P98095 1184 aa34.13■■■■□ 3.05
CSK-207ENST00000566464 CHMP7Q8WUX9 453 aaPredicted RBP34.12■■■■□ 3.05
CSK-207ENST00000566464 RUSC2Q8N2Y8 1516 aa34.12■■■■□ 3.05
CSK-207ENST00000566464 SYNJ2O15056 1496 aa34.1■■■■□ 3.05
CSK-207ENST00000566464 FHAD1B1AJZ9 1412 aa34.06■■■■□ 3.04
CSK-207ENST00000566464 DNAJC5Q9H3Z4 198 aa34.04■■■■□ 3.04
CSK-207ENST00000566464 ADAMTS12P58397 1594 aa34■■■■□ 3.03
CSK-207ENST00000566464 CHD1O14646 1710 aa33.98■■■■□ 3.03
CSK-207ENST00000566464 CARMIL1Q5VZK9 1371 aa33.96■■■■□ 3.03
CSK-207ENST00000566464 GRIN2AQ12879 1464 aa33.92■■■■□ 3.02
CSK-207ENST00000566464 CUL7Q14999 1698 aa33.88■■■■□ 3.01
CSK-207ENST00000566464 CSRNP3Q8WYN3 585 aa33.88■■■■□ 3.01
CSK-207ENST00000566464 EEA1Q15075 1411 aa33.87■■■■□ 3.01
CSK-207ENST00000566464 NUP160Q12769 1436 aa33.79■■■■□ 3
CSK-207ENST00000566464 FAM9AQ8IZU1 332 aaPredicted RBP33.78■■■■□ 3
CSK-207ENST00000566464 PRXQ9BXM0 1461 aa33.76■■■□□ 2.99
CSK-207ENST00000566464 RAPGEF2Q9Y4G8 1499 aa33.75■■■□□ 2.99
CSK-207ENST00000566464 CLASP1Q7Z460 1538 aa33.71■■■□□ 2.99
CSK-207ENST00000566464 CEP170Q5SW79 1584 aa33.7■■■□□ 2.99
CSK-207ENST00000566464 KIAA0586Q9BVV6 1533 aa33.58■■■□□ 2.97
CSK-207ENST00000566464 JPH4Q96JJ6 628 aa33.54■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms