RNA–Protein interactions for RNA: ENST00000566408.5

STUB1-208, Transcript of STIP1 homology and U-box containing protein 1, humanhuman

TSL 2

Gene STUB1, Length 684 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STUB1-208ENST00000566408 NISCHQ9Y2I1 1504 aa41.51■■■■■ 4.24
STUB1-208ENST00000566408 CCDC180Q9P1Z9 1646 aa36.73■■■■□ 3.47
STUB1-208ENST00000566408 ABCC9O60706 1549 aa35.41■■■■□ 3.26
STUB1-208ENST00000566408 ZCCHC6Q5VYS8 1495 aaKnown RBP34.7■■■■□ 3.15
STUB1-208ENST00000566408 DCAF1Q9Y4B6 1507 aa34.44■■■■□ 3.1
STUB1-208ENST00000566408 MYO15BQ96JP2 1530 aa34.43■■■■□ 3.1
STUB1-208ENST00000566408 NACADO15069 1562 aa34.41■■■■□ 3.1
STUB1-208ENST00000566408 RB1CC1Q8TDY2 1594 aa34.32■■■■□ 3.08
STUB1-208ENST00000566408 DCAF8L2P0C7V8 631 aa34.28■■■■□ 3.08
STUB1-208ENST00000566408 UNC13AQ9UPW8 1703 aa33.56■■■□□ 2.96
STUB1-208ENST00000566408 SCRIBQ14160 1630 aa33.46■■■□□ 2.95
STUB1-208ENST00000566408 BICRAQ9NZM4 1560 aa33.3■■■□□ 2.92
STUB1-208ENST00000566408 PABPN1Q86U42 306 aaKnown RBP eCLIP33.13■■■□□ 2.89
STUB1-208ENST00000566408 SHROOM4Q9ULL8 1493 aa33.04■■■□□ 2.88
STUB1-208ENST00000566408 EIF4G1Q04637 1599 aaKnown RBP32.36■■■□□ 2.77
STUB1-208ENST00000566408 CECR2Q9BXF3 1484 aa32.25■■■□□ 2.75
STUB1-208ENST00000566408 BAZ1AQ9NRL2 1556 aaPredicted RBP32.14■■■□□ 2.74
STUB1-208ENST00000566408 DNAJC5BQ9UF47 199 aa32.11■■■□□ 2.73
STUB1-208ENST00000566408 SMARCA4P51532 1647 aa32.11■■■□□ 2.73
STUB1-208ENST00000566408 CC2D2AQ9P2K1 1620 aa32.1■■■□□ 2.73
STUB1-208ENST00000566408 MROH2BQ7Z745 1585 aa31.98■■■□□ 2.71
STUB1-208ENST00000566408 PEG3Q9GZU2 1588 aa31.85■■■□□ 2.69
STUB1-208ENST00000566408 ATAD2BQ9ULI0 1458 aa31.83■■■□□ 2.69
STUB1-208ENST00000566408 SMARCA2P51531 1590 aa31.8■■■□□ 2.68
STUB1-208ENST00000566408 RSF1Q96T23 1441 aaPredicted RBP31.78■■■□□ 2.68
STUB1-208ENST00000566408 NCAPD3P42695 1498 aa31.77■■■□□ 2.68
STUB1-208ENST00000566408 HMGXB3Q12766 1538 aa31.65■■■□□ 2.66
STUB1-208ENST00000566408 WIZO95785 1651 aa31.64■■■□□ 2.65
STUB1-208ENST00000566408 BAZ1BQ9UIG0 1483 aaKnown RBP31.54■■■□□ 2.64
STUB1-208ENST00000566408 TOP2AP11388 1531 aaKnown RBP31.36■■■□□ 2.61
STUB1-208ENST00000566408 SUPT5HO00267 1087 aaKnown RBP31.15■■■□□ 2.58
STUB1-208ENST00000566408 CCDC88BA6NC98 1476 aa30.97■■■□□ 2.55
STUB1-208ENST00000566408 LAMC3Q9Y6N6 1575 aa30.83■■■□□ 2.53
STUB1-208ENST00000566408 CADPSQ9ULU8 1353 aa30.82■■■□□ 2.52
STUB1-208ENST00000566408 NESP48681 1621 aa30.79■■■□□ 2.52
STUB1-208ENST00000566408 CFTRP13569 1480 aa30.76■■■□□ 2.52
STUB1-208ENST00000566408 PDS5BQ9NTI5 1447 aa30.58■■■□□ 2.49
STUB1-208ENST00000566408 PRDM2Q13029 1718 aa30.56■■■□□ 2.48
STUB1-208ENST00000566408 ERCC6Q03468 1493 aa30.46■■■□□ 2.47
STUB1-208ENST00000566408 KIF21AQ7Z4S6 1674 aa30.46■■■□□ 2.47
STUB1-208ENST00000566408 FANCD2Q9BXW9 1451 aa30.45■■■□□ 2.47
STUB1-208ENST00000566408 CEP164Q9UPV0 1460 aa30.37■■■□□ 2.45
STUB1-208ENST00000566408 THOC2Q8NI27 1593 aaKnown RBP30.29■■■□□ 2.44
STUB1-208ENST00000566408 MRC2Q9UBG0 1479 aa30.25■■■□□ 2.43
STUB1-208ENST00000566408 WDR62O43379 1518 aa30.17■■■□□ 2.42
STUB1-208ENST00000566408 URB2Q14146 1524 aaKnown RBP30.14■■■□□ 2.42
STUB1-208ENST00000566408 CUX2O14529 1486 aa30.07■■■□□ 2.4
STUB1-208ENST00000566408 ABCC8Q09428 1581 aa30.07■■■□□ 2.4
STUB1-208ENST00000566408 DNMBPQ6XZF7 1577 aa30.04■■■□□ 2.4
STUB1-208ENST00000566408 TOPBP1Q92547 1522 aa30.03■■■□□ 2.4
STUB1-208ENST00000566408 CUX1P39880 1505 aa29.98■■■□□ 2.39
STUB1-208ENST00000566408 WRNQ14191 1432 aaPredicted RBP eCLIP29.93■■■□□ 2.38
STUB1-208ENST00000566408 TOP2BQ02880 1626 aa29.85■■■□□ 2.37
STUB1-208ENST00000566408 BIVM-ERCC5R4GMW8 1640 aa29.85■■■□□ 2.37
STUB1-208ENST00000566408 SYNJ1O43426 1573 aa29.85■■■□□ 2.37
STUB1-208ENST00000566408 POLA1P09884 1462 aaPredicted RBP29.81■■■□□ 2.36
STUB1-208ENST00000566408 FGD5Q6ZNL6 1462 aa29.78■■■□□ 2.36
STUB1-208ENST00000566408 IFT140Q96RY7 1462 aa29.74■■■□□ 2.35
STUB1-208ENST00000566408 TARBP1Q13395 1621 aaKnown RBP29.7■■■□□ 2.34
STUB1-208ENST00000566408 SOGA1O94964 1423 aa29.65■■■□□ 2.34
STUB1-208ENST00000566408 RAD54L2Q9Y4B4 1467 aa29.64■■■□□ 2.34
STUB1-208ENST00000566408 WDR97A6NE52 1622 aa29.57■■■□□ 2.32
STUB1-208ENST00000566408 ABCA10Q8WWZ4 1543 aa29.55■■■□□ 2.32
STUB1-208ENST00000566408 ZNF608Q9ULD9 1512 aaPredicted RBP29.54■■■□□ 2.32
STUB1-208ENST00000566408 EIF4G3O43432 1585 aaKnown RBP29.46■■■□□ 2.31
STUB1-208ENST00000566408 TRIM41Q8WV44 630 aa29.44■■■□□ 2.3
STUB1-208ENST00000566408 CHIC1Q5VXU3 224 aa29.43■■■□□ 2.3
STUB1-208ENST00000566408 AQRO60306 1485 aaKnown RBP eCLIP29.42■■■□□ 2.32e-7■■■■□ 22
STUB1-208ENST00000566408 TDRD9Q8NDG6 1382 aaKnown RBP29.41■■■□□ 2.3
STUB1-208ENST00000566408 ABCA5Q8WWZ7 1642 aa29.41■■■□□ 2.3
STUB1-208ENST00000566408 GAPVD1Q14C86 1478 aa29.34■■■□□ 2.29
STUB1-208ENST00000566408 GRIN2BQ13224 1484 aa29.29■■■□□ 2.28
STUB1-208ENST00000566408 KIF27Q86VH2 1401 aa29.26■■■□□ 2.27
STUB1-208ENST00000566408 PBRM1Q86U86 1689 aa29.25■■■□□ 2.27
STUB1-208ENST00000566408 ERICH3Q5RHP9 1530 aa29.21■■■□□ 2.27
STUB1-208ENST00000566408 MAGI1Q96QZ7 1491 aaPredicted RBP29.18■■■□□ 2.26
STUB1-208ENST00000566408 SNAPC4Q5SXM2 1469 aa29.17■■■□□ 2.26
STUB1-208ENST00000566408 RUSC2Q8N2Y8 1516 aa29.12■■■□□ 2.25
STUB1-208ENST00000566408 IGF1RP08069 1367 aa29.12■■■□□ 2.25
STUB1-208ENST00000566408 ADAMTS12P58397 1594 aa29.08■■■□□ 2.25
STUB1-208ENST00000566408 SYNJ2O15056 1496 aa29.05■■■□□ 2.24
STUB1-208ENST00000566408 FHAD1B1AJZ9 1412 aa29.03■■■□□ 2.24
STUB1-208ENST00000566408 EEA1Q15075 1411 aa29.03■■■□□ 2.24
STUB1-208ENST00000566408 CUL7Q14999 1698 aa29.02■■■□□ 2.24
STUB1-208ENST00000566408 CHD1O14646 1710 aa28.98■■■□□ 2.23
STUB1-208ENST00000566408 CARMIL1Q5VZK9 1371 aa28.92■■■□□ 2.22
STUB1-208ENST00000566408 CHMP7Q8WUX9 453 aaPredicted RBP28.92■■■□□ 2.22
STUB1-208ENST00000566408 GRIN2AQ12879 1464 aa28.91■■■□□ 2.22
STUB1-208ENST00000566408 FBLN2P98095 1184 aa28.87■■■□□ 2.21
STUB1-208ENST00000566408 CSRNP3Q8WYN3 585 aa28.87■■■□□ 2.21
STUB1-208ENST00000566408 PRXQ9BXM0 1461 aa28.86■■■□□ 2.21
STUB1-208ENST00000566408 OSCARQ8IYS5 282 aa28.83■■■□□ 2.21
STUB1-208ENST00000566408 RAPGEF2Q9Y4G8 1499 aa28.81■■■□□ 2.2
STUB1-208ENST00000566408 NUP160Q12769 1436 aa28.81■■■□□ 2.2
STUB1-208ENST00000566408 CEP170Q5SW79 1584 aa28.75■■■□□ 2.19
STUB1-208ENST00000566408 FAM9AQ8IZU1 332 aaPredicted RBP28.75■■■□□ 2.19
STUB1-208ENST00000566408 CLASP1Q7Z460 1538 aa28.74■■■□□ 2.19
STUB1-208ENST00000566408 KIF21BO75037 1637 aa28.7■■■□□ 2.19
STUB1-208ENST00000566408 KIAA0586Q9BVV6 1533 aa28.61■■■□□ 2.17
STUB1-208ENST00000566408 DNAJC5Q9H3Z4 198 aa28.58■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms