RNA–Protein interactions for RNA: ENST00000566369.1

IRF8-208, Transcript of interferon regulatory factor 8, humanhuman

TSL 3

Gene IRF8, Length 1,582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF8-208ENST00000566369 NISCHQ9Y2I1 1504 aa33.28■■■□□ 2.92
IRF8-208ENST00000566369 CCDC180Q9P1Z9 1646 aa29.5■■■□□ 2.31
IRF8-208ENST00000566369 ABCC9O60706 1549 aa28.66■■■□□ 2.18
IRF8-208ENST00000566369 DCAF8L2P0C7V8 631 aa27.79■■■□□ 2.04
IRF8-208ENST00000566369 ZCCHC6Q5VYS8 1495 aaKnown RBP27.74■■■□□ 2.03
IRF8-208ENST00000566369 NACADO15069 1562 aa27.73■■■□□ 2.03
IRF8-208ENST00000566369 RB1CC1Q8TDY2 1594 aa27.7■■■□□ 2.02
IRF8-208ENST00000566369 MYO15BQ96JP2 1530 aa27.64■■■□□ 2.02
IRF8-208ENST00000566369 DCAF1Q9Y4B6 1507 aa27.58■■■□□ 2.01
IRF8-208ENST00000566369 UNC13AQ9UPW8 1703 aa26.97■■□□□ 1.91
IRF8-208ENST00000566369 SCRIBQ14160 1630 aa26.88■■□□□ 1.89
IRF8-208ENST00000566369 PABPN1Q86U42 306 aaKnown RBP eCLIP26.84■■□□□ 1.89
IRF8-208ENST00000566369 BICRAQ9NZM4 1560 aa26.78■■□□□ 1.88
IRF8-208ENST00000566369 SHROOM4Q9ULL8 1493 aa26.63■■□□□ 1.85
IRF8-208ENST00000566369 DNAJC5BQ9UF47 199 aa26.12■■□□□ 1.77
IRF8-208ENST00000566369 EIF4G1Q04637 1599 aaKnown RBP26.09■■□□□ 1.77
IRF8-208ENST00000566369 CC2D2AQ9P2K1 1620 aa25.93■■□□□ 1.74
IRF8-208ENST00000566369 CECR2Q9BXF3 1484 aa25.86■■□□□ 1.73
IRF8-208ENST00000566369 BAZ1AQ9NRL2 1556 aaPredicted RBP25.8■■□□□ 1.72
IRF8-208ENST00000566369 SMARCA4P51532 1647 aa25.76■■□□□ 1.71
IRF8-208ENST00000566369 SMARCA2P51531 1590 aa25.61■■□□□ 1.69
IRF8-208ENST00000566369 MROH2BQ7Z745 1585 aa25.61■■□□□ 1.69
IRF8-208ENST00000566369 ATAD2BQ9ULI0 1458 aa25.6■■□□□ 1.69
IRF8-208ENST00000566369 NCAPD3P42695 1498 aa25.58■■□□□ 1.69
IRF8-208ENST00000566369 PEG3Q9GZU2 1588 aa25.53■■□□□ 1.68
IRF8-208ENST00000566369 HMGXB3Q12766 1538 aa25.45■■□□□ 1.66
IRF8-208ENST00000566369 RSF1Q96T23 1441 aaPredicted RBP25.42■■□□□ 1.66
IRF8-208ENST00000566369 BAZ1BQ9UIG0 1483 aaKnown RBP25.41■■□□□ 1.66
IRF8-208ENST00000566369 WIZO95785 1651 aa25.33■■□□□ 1.64
IRF8-208ENST00000566369 TOP2AP11388 1531 aaKnown RBP25.12■■□□□ 1.61
IRF8-208ENST00000566369 SUPT5HO00267 1087 aaKnown RBP24.96■■□□□ 1.59
IRF8-208ENST00000566369 LAMC3Q9Y6N6 1575 aa24.86■■□□□ 1.57
IRF8-208ENST00000566369 CADPSQ9ULU8 1353 aa24.85■■□□□ 1.57
IRF8-208ENST00000566369 NESP48681 1621 aa24.83■■□□□ 1.57
IRF8-208ENST00000566369 CCDC88BA6NC98 1476 aa24.83■■□□□ 1.57
IRF8-208ENST00000566369 ERCC6Q03468 1493 aa24.74■■□□□ 1.55
IRF8-208ENST00000566369 PDS5BQ9NTI5 1447 aa24.74■■□□□ 1.55
IRF8-208ENST00000566369 CFTRP13569 1480 aa24.73■■□□□ 1.55
IRF8-208ENST00000566369 FANCD2Q9BXW9 1451 aa24.54■■□□□ 1.52
IRF8-208ENST00000566369 KIF21AQ7Z4S6 1674 aa24.53■■□□□ 1.52
IRF8-208ENST00000566369 PRDM2Q13029 1718 aa24.51■■□□□ 1.51
IRF8-208ENST00000566369 CEP164Q9UPV0 1460 aa24.5■■□□□ 1.51
IRF8-208ENST00000566369 MRC2Q9UBG0 1479 aa24.42■■□□□ 1.5
IRF8-208ENST00000566369 CUX2O14529 1486 aa24.41■■□□□ 1.5
IRF8-208ENST00000566369 THOC2Q8NI27 1593 aaKnown RBP24.4■■□□□ 1.5
IRF8-208ENST00000566369 WDR62O43379 1518 aa24.3■■□□□ 1.48
IRF8-208ENST00000566369 ABCC8Q09428 1581 aa24.25■■□□□ 1.47
IRF8-208ENST00000566369 URB2Q14146 1524 aaKnown RBP24.25■■□□□ 1.47
IRF8-208ENST00000566369 TOPBP1Q92547 1522 aa24.16■■□□□ 1.46
IRF8-208ENST00000566369 DNMBPQ6XZF7 1577 aa24.15■■□□□ 1.46
IRF8-208ENST00000566369 CUX1P39880 1505 aa24.02■■□□□ 1.44
IRF8-208ENST00000566369 IFT140Q96RY7 1462 aa23.99■■□□□ 1.43
IRF8-208ENST00000566369 WRNQ14191 1432 aaPredicted RBP eCLIP23.99■■□□□ 1.43
IRF8-208ENST00000566369 POLA1P09884 1462 aaPredicted RBP23.96■■□□□ 1.43
IRF8-208ENST00000566369 FGD5Q6ZNL6 1462 aa23.92■■□□□ 1.42
IRF8-208ENST00000566369 SOGA1O94964 1423 aa23.92■■□□□ 1.42
IRF8-208ENST00000566369 TOP2BQ02880 1626 aa23.89■■□□□ 1.41
IRF8-208ENST00000566369 BIVM-ERCC5R4GMW8 1640 aa23.86■■□□□ 1.41
IRF8-208ENST00000566369 TARBP1Q13395 1621 aaKnown RBP23.86■■□□□ 1.41
IRF8-208ENST00000566369 SYNJ1O43426 1573 aa23.84■■□□□ 1.41
IRF8-208ENST00000566369 RAD54L2Q9Y4B4 1467 aa23.83■■□□□ 1.41
IRF8-208ENST00000566369 ZNF608Q9ULD9 1512 aaPredicted RBP23.8■■□□□ 1.4
IRF8-208ENST00000566369 WDR97A6NE52 1622 aa23.75■■□□□ 1.39
IRF8-208ENST00000566369 ABCA10Q8WWZ4 1543 aa23.73■■□□□ 1.39
IRF8-208ENST00000566369 TDRD9Q8NDG6 1382 aaKnown RBP23.73■■□□□ 1.39
IRF8-208ENST00000566369 AQRO60306 1485 aaKnown RBP eCLIP23.72■■□□□ 1.39
IRF8-208ENST00000566369 EIF4G3O43432 1585 aaKnown RBP23.71■■□□□ 1.39
IRF8-208ENST00000566369 GAPVD1Q14C86 1478 aa23.62■■□□□ 1.37
IRF8-208ENST00000566369 TRIM41Q8WV44 630 aa23.61■■□□□ 1.37
IRF8-208ENST00000566369 GRIN2BQ13224 1484 aa23.61■■□□□ 1.37
IRF8-208ENST00000566369 ABCA5Q8WWZ7 1642 aa23.57■■□□□ 1.36
IRF8-208ENST00000566369 MAGI1Q96QZ7 1491 aaPredicted RBP23.53■■□□□ 1.36
IRF8-208ENST00000566369 KIF27Q86VH2 1401 aa23.5■■□□□ 1.35
IRF8-208ENST00000566369 OSCARQ8IYS5 282 aa23.5■■□□□ 1.35
IRF8-208ENST00000566369 PBRM1Q86U86 1689 aa23.5■■□□□ 1.35
IRF8-208ENST00000566369 SNAPC4Q5SXM2 1469 aa23.49■■□□□ 1.35
IRF8-208ENST00000566369 DNAJC5Q9H3Z4 198 aa23.48■■□□□ 1.35
IRF8-208ENST00000566369 FBLN2P98095 1184 aa23.47■■□□□ 1.35
IRF8-208ENST00000566369 ERICH3Q5RHP9 1530 aa23.47■■□□□ 1.35
IRF8-208ENST00000566369 CHMP7Q8WUX9 453 aaPredicted RBP23.45■■□□□ 1.34
IRF8-208ENST00000566369 SYNJ2O15056 1496 aa23.43■■□□□ 1.34
IRF8-208ENST00000566369 CHIC1Q5VXU3 224 aa23.4■■□□□ 1.34
IRF8-208ENST00000566369 FHAD1B1AJZ9 1412 aa23.37■■□□□ 1.33
IRF8-208ENST00000566369 IGF1RP08069 1367 aa23.37■■□□□ 1.33
IRF8-208ENST00000566369 CHD1O14646 1710 aa23.37■■□□□ 1.33
IRF8-208ENST00000566369 ADAMTS12P58397 1594 aa23.33■■□□□ 1.33
IRF8-208ENST00000566369 CUL7Q14999 1698 aa23.27■■□□□ 1.32
IRF8-208ENST00000566369 GRIN2AQ12879 1464 aa23.27■■□□□ 1.32
IRF8-208ENST00000566369 CARMIL1Q5VZK9 1371 aa23.25■■□□□ 1.31
IRF8-208ENST00000566369 RUSC2Q8N2Y8 1516 aa23.24■■□□□ 1.31
IRF8-208ENST00000566369 EEA1Q15075 1411 aa23.21■■□□□ 1.31
IRF8-208ENST00000566369 NUP160Q12769 1436 aa23.16■■□□□ 1.3
IRF8-208ENST00000566369 CSRNP3Q8WYN3 585 aa23.14■■□□□ 1.3
IRF8-208ENST00000566369 CLASP1Q7Z460 1538 aa23.14■■□□□ 1.29
IRF8-208ENST00000566369 RAPGEF2Q9Y4G8 1499 aa23.12■■□□□ 1.29
IRF8-208ENST00000566369 CEP170Q5SW79 1584 aa23.11■■□□□ 1.29
IRF8-208ENST00000566369 PRXQ9BXM0 1461 aa23.06■■□□□ 1.28
IRF8-208ENST00000566369 FAM9AQ8IZU1 332 aaPredicted RBP23.05■■□□□ 1.28
IRF8-208ENST00000566369 KIAA0586Q9BVV6 1533 aa23.03■■□□□ 1.28
IRF8-208ENST00000566369 ARHGEF11O15085 1522 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms