RNA–Protein interactions for RNA: ENST00000566279.5

TCF4-231, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-231ENST00000566279 NISCHQ9Y2I1 1504 aa23.37■■□□□ 1.33
TCF4-231ENST00000566279 CCDC180Q9P1Z9 1646 aa20.65■□□□□ 0.9
TCF4-231ENST00000566279 ABCC9O60706 1549 aa20.12■□□□□ 0.81
TCF4-231ENST00000566279 DCAF8L2P0C7V8 631 aa19.55■□□□□ 0.72
TCF4-231ENST00000566279 ZCCHC6Q5VYS8 1495 aaKnown RBP19.52■□□□□ 0.72
TCF4-231ENST00000566279 NACADO15069 1562 aa19.34■□□□□ 0.69
TCF4-231ENST00000566279 RB1CC1Q8TDY2 1594 aa19.34■□□□□ 0.69
TCF4-231ENST00000566279 DCAF1Q9Y4B6 1507 aa19.25■□□□□ 0.67
TCF4-231ENST00000566279 MYO15BQ96JP2 1530 aa19.23■□□□□ 0.67
TCF4-231ENST00000566279 UNC13AQ9UPW8 1703 aa19.03■□□□□ 0.64
TCF4-231ENST00000566279 SCRIBQ14160 1630 aa19■□□□□ 0.63
TCF4-231ENST00000566279 PABPN1Q86U42 306 aaKnown RBP eCLIP18.85■□□□□ 0.61
TCF4-231ENST00000566279 BICRAQ9NZM4 1560 aa18.82■□□□□ 0.6
TCF4-231ENST00000566279 SHROOM4Q9ULL8 1493 aa18.76■□□□□ 0.59
TCF4-231ENST00000566279 DNAJC5BQ9UF47 199 aa18.29■□□□□ 0.52
TCF4-231ENST00000566279 EIF4G1Q04637 1599 aaKnown RBP18.29■□□□□ 0.52
TCF4-231ENST00000566279 CECR2Q9BXF3 1484 aa18.27■□□□□ 0.51
TCF4-231ENST00000566279 CC2D2AQ9P2K1 1620 aa18.18■□□□□ 0.5
TCF4-231ENST00000566279 SMARCA4P51532 1647 aa18.12■□□□□ 0.49
TCF4-231ENST00000566279 BAZ1AQ9NRL2 1556 aaPredicted RBP18.08■□□□□ 0.49
TCF4-231ENST00000566279 MROH2BQ7Z745 1585 aa18.08■□□□□ 0.48
TCF4-231ENST00000566279 WIZO95785 1651 aa17.94■□□□□ 0.46
TCF4-231ENST00000566279 ATAD2BQ9ULI0 1458 aa17.93■□□□□ 0.46
TCF4-231ENST00000566279 RSF1Q96T23 1441 aaPredicted RBP17.91■□□□□ 0.46
TCF4-231ENST00000566279 SMARCA2P51531 1590 aa17.88■□□□□ 0.45
TCF4-231ENST00000566279 PEG3Q9GZU2 1588 aa17.87■□□□□ 0.45
TCF4-231ENST00000566279 NCAPD3P42695 1498 aa17.84■□□□□ 0.45
TCF4-231ENST00000566279 SUPT5HO00267 1087 aaKnown RBP17.84■□□□□ 0.45
TCF4-231ENST00000566279 BAZ1BQ9UIG0 1483 aaKnown RBP17.81■□□□□ 0.44
TCF4-231ENST00000566279 HMGXB3Q12766 1538 aa17.79■□□□□ 0.44
TCF4-231ENST00000566279 TOP2AP11388 1531 aaKnown RBP17.66■□□□□ 0.42
TCF4-231ENST00000566279 NESP48681 1621 aa17.5■□□□□ 0.39
TCF4-231ENST00000566279 CCDC88BA6NC98 1476 aa17.48■□□□□ 0.39
TCF4-231ENST00000566279 LAMC3Q9Y6N6 1575 aa17.36■□□□□ 0.37
TCF4-231ENST00000566279 CADPSQ9ULU8 1353 aa17.36■□□□□ 0.37
TCF4-231ENST00000566279 CFTRP13569 1480 aa17.31■□□□□ 0.36
TCF4-231ENST00000566279 KIF21AQ7Z4S6 1674 aa17.3■□□□□ 0.36
TCF4-231ENST00000566279 ERCC6Q03468 1493 aa17.27■□□□□ 0.36
TCF4-231ENST00000566279 PRDM2Q13029 1718 aa17.24■□□□□ 0.35
TCF4-231ENST00000566279 CHIC1Q5VXU3 224 aa17.22■□□□□ 0.35
TCF4-231ENST00000566279 PDS5BQ9NTI5 1447 aa17.21■□□□□ 0.35
TCF4-231ENST00000566279 FANCD2Q9BXW9 1451 aa17.2■□□□□ 0.34
TCF4-231ENST00000566279 CEP164Q9UPV0 1460 aa17.15■□□□□ 0.34
TCF4-231ENST00000566279 THOC2Q8NI27 1593 aaKnown RBP17.14■□□□□ 0.33
TCF4-231ENST00000566279 MRC2Q9UBG0 1479 aa17.06■□□□□ 0.32
TCF4-231ENST00000566279 URB2Q14146 1524 aaKnown RBP17.05■□□□□ 0.32
TCF4-231ENST00000566279 WDR62O43379 1518 aa17.01■□□□□ 0.31
TCF4-231ENST00000566279 ABCC8Q09428 1581 aa17■□□□□ 0.31
TCF4-231ENST00000566279 TOPBP1Q92547 1522 aa16.96■□□□□ 0.3
TCF4-231ENST00000566279 DNMBPQ6XZF7 1577 aa16.94■□□□□ 0.3
TCF4-231ENST00000566279 CUX1P39880 1505 aa16.94■□□□□ 0.3
TCF4-231ENST00000566279 CUX2O14529 1486 aa16.93■□□□□ 0.3
TCF4-231ENST00000566279 SYNJ1O43426 1573 aa16.89■□□□□ 0.29
TCF4-231ENST00000566279 WRNQ14191 1432 aaPredicted RBP eCLIP16.87■□□□□ 0.29
TCF4-231ENST00000566279 FGD5Q6ZNL6 1462 aa16.84■□□□□ 0.29
TCF4-231ENST00000566279 POLA1P09884 1462 aaPredicted RBP16.84■□□□□ 0.29
TCF4-231ENST00000566279 TOP2BQ02880 1626 aa16.82■□□□□ 0.28
TCF4-231ENST00000566279 BIVM-ERCC5R4GMW8 1640 aa16.82■□□□□ 0.28
TCF4-231ENST00000566279 RAD54L2Q9Y4B4 1467 aa16.81■□□□□ 0.28
TCF4-231ENST00000566279 TARBP1Q13395 1621 aaKnown RBP16.76■□□□□ 0.27
TCF4-231ENST00000566279 ZNF608Q9ULD9 1512 aaPredicted RBP16.75■□□□□ 0.27
TCF4-231ENST00000566279 SOGA1O94964 1423 aa16.74■□□□□ 0.27
TCF4-231ENST00000566279 IFT140Q96RY7 1462 aa16.74■□□□□ 0.27
TCF4-231ENST00000566279 TRIM41Q8WV44 630 aa16.72■□□□□ 0.27
TCF4-231ENST00000566279 WDR97A6NE52 1622 aa16.7■□□□□ 0.26
TCF4-231ENST00000566279 EIF4G3O43432 1585 aaKnown RBP16.69■□□□□ 0.26
TCF4-231ENST00000566279 AQRO60306 1485 aaKnown RBP eCLIP16.67■□□□□ 0.26
TCF4-231ENST00000566279 TDRD9Q8NDG6 1382 aaKnown RBP16.67■□□□□ 0.26
TCF4-231ENST00000566279 ABCA10Q8WWZ4 1543 aa16.63■□□□□ 0.25
TCF4-231ENST00000566279 LOC105371045A0A1W2PR82 267 aa16.59■□□□□ 0.25
TCF4-231ENST00000566279 ABCA5Q8WWZ7 1642 aa16.59■□□□□ 0.25
TCF4-231ENST00000566279 PBRM1Q86U86 1689 aa16.57■□□□□ 0.24
TCF4-231ENST00000566279 GAPVD1Q14C86 1478 aa16.56■□□□□ 0.24
TCF4-231ENST00000566279 RUSC2Q8N2Y8 1516 aa16.53■□□□□ 0.24
TCF4-231ENST00000566279 SNAPC4Q5SXM2 1469 aa16.51■□□□□ 0.23
TCF4-231ENST00000566279 GRIN2BQ13224 1484 aa16.5■□□□□ 0.23
TCF4-231ENST00000566279 KIF27Q86VH2 1401 aa16.46■□□□□ 0.23
TCF4-231ENST00000566279 CHD1O14646 1710 aa16.46■□□□□ 0.23
TCF4-231ENST00000566279 FAM9AQ8IZU1 332 aaPredicted RBP16.46■□□□□ 0.23
TCF4-231ENST00000566279 FBLN2P98095 1184 aa16.45■□□□□ 0.22
TCF4-231ENST00000566279 ERICH3Q5RHP9 1530 aa16.42■□□□□ 0.22
TCF4-231ENST00000566279 MAGI1Q96QZ7 1491 aaPredicted RBP16.42■□□□□ 0.22
TCF4-231ENST00000566279 ADAMTS12P58397 1594 aa16.42■□□□□ 0.22
TCF4-231ENST00000566279 IGF1RP08069 1367 aa16.39■□□□□ 0.21
TCF4-231ENST00000566279 SYNJ2O15056 1496 aa16.37■□□□□ 0.21
TCF4-231ENST00000566279 CHMP7Q8WUX9 453 aaPredicted RBP16.36■□□□□ 0.21
TCF4-231ENST00000566279 FHAD1B1AJZ9 1412 aa16.34■□□□□ 0.21
TCF4-231ENST00000566279 CUL7Q14999 1698 aa16.34■□□□□ 0.21
TCF4-231ENST00000566279 GRIN2AQ12879 1464 aa16.32■□□□□ 0.2
TCF4-231ENST00000566279 CARMIL1Q5VZK9 1371 aa16.3■□□□□ 0.2
TCF4-231ENST00000566279 OSCARQ8IYS5 282 aa16.29■□□□□ 0.2
TCF4-231ENST00000566279 CEP170Q5SW79 1584 aa16.28■□□□□ 0.2
TCF4-231ENST00000566279 EHMT2Q96KQ7 1210 aa16.27■□□□□ 0.19
TCF4-231ENST00000566279 CSRNP3Q8WYN3 585 aa16.25■□□□□ 0.19
TCF4-231ENST00000566279 EEA1Q15075 1411 aa16.25■□□□□ 0.19
TCF4-231ENST00000566279 PRXQ9BXM0 1461 aa16.22■□□□□ 0.19
TCF4-231ENST00000566279 RAPGEF2Q9Y4G8 1499 aa16.22■□□□□ 0.19
TCF4-231ENST00000566279 CLASP1Q7Z460 1538 aa16.21■□□□□ 0.19
TCF4-231ENST00000566279 NUP160Q12769 1436 aa16.21■□□□□ 0.19
TCF4-231ENST00000566279 DNAJC5Q9H3Z4 198 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms