RNA–Protein interactions for RNA: ENST00000566270.5

LAT-212, Transcript of linker for activation of T cells, humanhuman

TSL 1 (best)

Gene LAT, Length 946 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAT-212ENST00000566270 NISCHQ9Y2I1 1504 aa52.7■■■■■ 6.03
LAT-212ENST00000566270 CCDC180Q9P1Z9 1646 aa46.78■■■■■ 5.08
LAT-212ENST00000566270 ABCC9O60706 1549 aa45.07■■■■■ 4.81
LAT-212ENST00000566270 ZCCHC6Q5VYS8 1495 aaKnown RBP44.03■■■■■ 4.64
LAT-212ENST00000566270 NACADO15069 1562 aa43.81■■■■■ 4.6
LAT-212ENST00000566270 MYO15BQ96JP2 1530 aa43.76■■■■■ 4.6
LAT-212ENST00000566270 RB1CC1Q8TDY2 1594 aa43.74■■■■■ 4.59
LAT-212ENST00000566270 DCAF1Q9Y4B6 1507 aa43.73■■■■■ 4.59
LAT-212ENST00000566270 DCAF8L2P0C7V8 631 aa43.64■■■■■ 4.58
LAT-212ENST00000566270 UNC13AQ9UPW8 1703 aa42.74■■■■■ 4.43
LAT-212ENST00000566270 SCRIBQ14160 1630 aa42.57■■■■■ 4.4
LAT-212ENST00000566270 BICRAQ9NZM4 1560 aa42.31■■■■■ 4.36
LAT-212ENST00000566270 PABPN1Q86U42 306 aaKnown RBP eCLIP42.11■■■■■ 4.33
LAT-212ENST00000566270 SHROOM4Q9ULL8 1493 aa42.1■■■■■ 4.33
LAT-212ENST00000566270 DNAJC5BQ9UF47 199 aa41.79■■■■■ 4.28
LAT-212ENST00000566270 EIF4G1Q04637 1599 aaKnown RBP41.19■■■■■ 4.18
LAT-212ENST00000566270 CECR2Q9BXF3 1484 aa40.9■■■■■ 4.14
LAT-212ENST00000566270 CC2D2AQ9P2K1 1620 aa40.89■■■■■ 4.14
LAT-212ENST00000566270 BAZ1AQ9NRL2 1556 aaPredicted RBP40.87■■■■■ 4.13
LAT-212ENST00000566270 SMARCA4P51532 1647 aa40.82■■■■■ 4.13
LAT-212ENST00000566270 MROH2BQ7Z745 1585 aa40.57■■■■■ 4.08
LAT-212ENST00000566270 SMARCA2P51531 1590 aa40.49■■■■■ 4.07
LAT-212ENST00000566270 PEG3Q9GZU2 1588 aa40.47■■■■■ 4.07
LAT-212ENST00000566270 ATAD2BQ9ULI0 1458 aa40.43■■■■■ 4.06
LAT-212ENST00000566270 NCAPD3P42695 1498 aa40.36■■■■■ 4.05
LAT-212ENST00000566270 HMGXB3Q12766 1538 aa40.28■■■■■ 4.04
LAT-212ENST00000566270 RSF1Q96T23 1441 aaPredicted RBP40.28■■■■■ 4.04
LAT-212ENST00000566270 WIZO95785 1651 aa40.18■■■■■ 4.02
LAT-212ENST00000566270 BAZ1BQ9UIG0 1483 aaKnown RBP40.15■■■■■ 4.02
LAT-212ENST00000566270 TOP2AP11388 1531 aaKnown RBP39.85■■■■□ 3.97
LAT-212ENST00000566270 SUPT5HO00267 1087 aaKnown RBP39.5■■■■□ 3.91
LAT-212ENST00000566270 CCDC88BA6NC98 1476 aa39.29■■■■□ 3.88
LAT-212ENST00000566270 LAMC3Q9Y6N6 1575 aa39.29■■■■□ 3.88
LAT-212ENST00000566270 CADPSQ9ULU8 1353 aa39.18■■■■□ 3.86
LAT-212ENST00000566270 NESP48681 1621 aa39.14■■■■□ 3.86
LAT-212ENST00000566270 CFTRP13569 1480 aa39.07■■■■□ 3.85
LAT-212ENST00000566270 PRDM2Q13029 1718 aa38.97■■■■□ 3.83
LAT-212ENST00000566270 PDS5BQ9NTI5 1447 aa38.96■■■■□ 3.83
LAT-212ENST00000566270 DNAJC5Q9H3Z4 198 aa38.95■■■■□ 3.83
LAT-212ENST00000566270 ERCC6Q03468 1493 aa38.89■■■■□ 3.82
LAT-212ENST00000566270 KIF21AQ7Z4S6 1674 aa38.81■■■■□ 3.8
LAT-212ENST00000566270 FANCD2Q9BXW9 1451 aa38.73■■■■□ 3.79
LAT-212ENST00000566270 CEP164Q9UPV0 1460 aa38.68■■■■□ 3.78
LAT-212ENST00000566270 THOC2Q8NI27 1593 aaKnown RBP38.57■■■■□ 3.77
LAT-212ENST00000566270 MRC2Q9UBG0 1479 aa38.52■■■■□ 3.76
LAT-212ENST00000566270 WDR62O43379 1518 aa38.4■■■■□ 3.74
LAT-212ENST00000566270 CUX2O14529 1486 aa38.37■■■■□ 3.73
LAT-212ENST00000566270 ABCC8Q09428 1581 aa38.3■■■■□ 3.72
LAT-212ENST00000566270 URB2Q14146 1524 aaKnown RBP38.29■■■■□ 3.72
LAT-212ENST00000566270 DNMBPQ6XZF7 1577 aa38.23■■■■□ 3.71
LAT-212ENST00000566270 TOPBP1Q92547 1522 aa38.17■■■■□ 3.7
LAT-212ENST00000566270 CUX1P39880 1505 aa38.05■■■■□ 3.68
LAT-212ENST00000566270 WRNQ14191 1432 aaPredicted RBP eCLIP38.01■■■■□ 3.68
LAT-212ENST00000566270 BIVM-ERCC5R4GMW8 1640 aa37.94■■■■□ 3.66
LAT-212ENST00000566270 TOP2BQ02880 1626 aa37.93■■■■□ 3.66
LAT-212ENST00000566270 POLA1P09884 1462 aaPredicted RBP37.88■■■■□ 3.65
LAT-212ENST00000566270 SYNJ1O43426 1573 aa37.88■■■■□ 3.65
LAT-212ENST00000566270 IFT140Q96RY7 1462 aa37.86■■■■□ 3.65
LAT-212ENST00000566270 FGD5Q6ZNL6 1462 aa37.85■■■■□ 3.65
LAT-212ENST00000566270 TARBP1Q13395 1621 aaKnown RBP37.75■■■■□ 3.63
LAT-212ENST00000566270 SOGA1O94964 1423 aa37.7■■■■□ 3.63
LAT-212ENST00000566270 RAD54L2Q9Y4B4 1467 aa37.64■■■■□ 3.62
LAT-212ENST00000566270 WDR97A6NE52 1622 aa37.63■■■■□ 3.61
LAT-212ENST00000566270 ABCA10Q8WWZ4 1543 aa37.56■■■■□ 3.6
LAT-212ENST00000566270 ZNF608Q9ULD9 1512 aaPredicted RBP37.53■■■■□ 3.6
LAT-212ENST00000566270 EIF4G3O43432 1585 aaKnown RBP37.52■■■■□ 3.6
LAT-212ENST00000566270 ABCA5Q8WWZ7 1642 aa37.39■■■■□ 3.58
LAT-212ENST00000566270 AQRO60306 1485 aaKnown RBP eCLIP37.38■■■■□ 3.57
LAT-212ENST00000566270 TRIM41Q8WV44 630 aa37.37■■■■□ 3.57
LAT-212ENST00000566270 TDRD9Q8NDG6 1382 aaKnown RBP37.37■■■■□ 3.57
LAT-212ENST00000566270 GAPVD1Q14C86 1478 aa37.32■■■■□ 3.56
LAT-212ENST00000566270 PBRM1Q86U86 1689 aa37.28■■■■□ 3.56
LAT-212ENST00000566270 GRIN2BQ13224 1484 aa37.26■■■■□ 3.56
LAT-212ENST00000566270 KIF27Q86VH2 1401 aa37.19■■■■□ 3.54
LAT-212ENST00000566270 CHIC1Q5VXU3 224 aa37.19■■■■□ 3.54
LAT-212ENST00000566270 ERICH3Q5RHP9 1530 aa37.15■■■■□ 3.54
LAT-212ENST00000566270 MAGI1Q96QZ7 1491 aaPredicted RBP37.15■■■■□ 3.54
LAT-212ENST00000566270 SNAPC4Q5SXM2 1469 aa37.11■■■■□ 3.53
LAT-212ENST00000566270 ADAMTS12P58397 1594 aa37■■■■□ 3.51
LAT-212ENST00000566270 SYNJ2O15056 1496 aa36.97■■■■□ 3.51
LAT-212ENST00000566270 CHD1O14646 1710 aa36.96■■■■□ 3.51
LAT-212ENST00000566270 CUL7Q14999 1698 aa36.95■■■■□ 3.51
LAT-212ENST00000566270 FHAD1B1AJZ9 1412 aa36.92■■■■□ 3.5
LAT-212ENST00000566270 IGF1RP08069 1367 aa36.91■■■■□ 3.5
LAT-212ENST00000566270 EEA1Q15075 1411 aa36.87■■■■□ 3.49
LAT-212ENST00000566270 RUSC2Q8N2Y8 1516 aa36.86■■■■□ 3.49
LAT-212ENST00000566270 CHMP7Q8WUX9 453 aaPredicted RBP36.83■■■■□ 3.49
LAT-212ENST00000566270 FBLN2P98095 1184 aa36.79■■■■□ 3.48
LAT-212ENST00000566270 GRIN2AQ12879 1464 aa36.78■■■■□ 3.48
LAT-212ENST00000566270 OSCARQ8IYS5 282 aa36.76■■■■□ 3.48
LAT-212ENST00000566270 CARMIL1Q5VZK9 1371 aa36.73■■■■□ 3.47
LAT-212ENST00000566270 RAPGEF2Q9Y4G8 1499 aa36.62■■■■□ 3.45
LAT-212ENST00000566270 CSRNP3Q8WYN3 585 aa36.61■■■■□ 3.45
LAT-212ENST00000566270 NUP160Q12769 1436 aa36.6■■■■□ 3.45
LAT-212ENST00000566270 PRXQ9BXM0 1461 aa36.58■■■■□ 3.45
LAT-212ENST00000566270 CLASP1Q7Z460 1538 aa36.56■■■■□ 3.44
LAT-212ENST00000566270 CEP170Q5SW79 1584 aa36.56■■■■□ 3.44
LAT-212ENST00000566270 FAM9AQ8IZU1 332 aaPredicted RBP36.46■■■■□ 3.43
LAT-212ENST00000566270 KIF21BO75037 1637 aa36.45■■■■□ 3.42
LAT-212ENST00000566270 KIAA0586Q9BVV6 1533 aa36.37■■■■□ 3.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms