RNA–Protein interactions for RNA: ENST00000565318.5

CPT1A-208, Transcript of carnitine palmitoyltransferase 1A, humanhuman

TSL 5

Gene CPT1A, Length 511 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-208ENST00000565318 NISCHQ9Y2I1 1504 aa21.86■■□□□ 1.09
CPT1A-208ENST00000565318 CCDC180Q9P1Z9 1646 aa19.09■□□□□ 0.65
CPT1A-208ENST00000565318 CHIC1Q5VXU3 224 aa18.84■□□□□ 0.61
CPT1A-208ENST00000565318 ABCC9O60706 1549 aa18.65■□□□□ 0.58
CPT1A-208ENST00000565318 AEBP2Q6ZN18 517 aaPredicted RBP18.42■□□□□ 0.54
CPT1A-208ENST00000565318 DCAF8L2P0C7V8 631 aa18.37■□□□□ 0.53
CPT1A-208ENST00000565318 ZCCHC6Q5VYS8 1495 aaKnown RBP18.21■□□□□ 0.51
CPT1A-208ENST00000565318 DCAF1Q9Y4B6 1507 aa18.07■□□□□ 0.48
CPT1A-208ENST00000565318 MYO15BQ96JP2 1530 aa18.05■□□□□ 0.48
CPT1A-208ENST00000565318 NACADO15069 1562 aa18.04■□□□□ 0.48
CPT1A-208ENST00000565318 RB1CC1Q8TDY2 1594 aa17.96■□□□□ 0.46
CPT1A-208ENST00000565318 PABPN1Q86U42 306 aaKnown RBP eCLIP17.64■□□□□ 0.41
CPT1A-208ENST00000565318 SCRIBQ14160 1630 aa17.52■□□□□ 0.4
CPT1A-208ENST00000565318 SHROOM4Q9ULL8 1493 aa17.51■□□□□ 0.39
CPT1A-208ENST00000565318 BICRAQ9NZM4 1560 aa17.45■□□□□ 0.38
CPT1A-208ENST00000565318 UNC13AQ9UPW8 1703 aa17.38■□□□□ 0.37
CPT1A-208ENST00000565318 DNAJC5BQ9UF47 199 aa17.11■□□□□ 0.33
CPT1A-208ENST00000565318 CECR2Q9BXF3 1484 aa17.06■□□□□ 0.32
CPT1A-208ENST00000565318 EIF4G1Q04637 1599 aaKnown RBP16.95■□□□□ 0.3
CPT1A-208ENST00000565318 MROH2BQ7Z745 1585 aa16.86■□□□□ 0.29
CPT1A-208ENST00000565318 BAZ1AQ9NRL2 1556 aaPredicted RBP16.86■□□□□ 0.29
CPT1A-208ENST00000565318 RSF1Q96T23 1441 aaPredicted RBP16.84■□□□□ 0.29
CPT1A-208ENST00000565318 CC2D2AQ9P2K1 1620 aa16.81■□□□□ 0.28
CPT1A-208ENST00000565318 SMARCA4P51532 1647 aa16.8■□□□□ 0.28
CPT1A-208ENST00000565318 ATAD2BQ9ULI0 1458 aa16.79■□□□□ 0.28
CPT1A-208ENST00000565318 NCAPD3P42695 1498 aa16.77■□□□□ 0.28
CPT1A-208ENST00000565318 SUPT5HO00267 1087 aaKnown RBP16.7■□□□□ 0.26
CPT1A-208ENST00000565318 PHF23Q9BUL5 403 aaPredicted RBP16.69■□□□□ 0.26
CPT1A-208ENST00000565318 SMARCA2P51531 1590 aa16.66■□□□□ 0.26
CPT1A-208ENST00000565318 PEG3Q9GZU2 1588 aa16.66■□□□□ 0.26
CPT1A-208ENST00000565318 WIZO95785 1651 aa16.6■□□□□ 0.25
CPT1A-208ENST00000565318 BAZ1BQ9UIG0 1483 aaKnown RBP16.59■□□□□ 0.25
CPT1A-208ENST00000565318 HMGXB3Q12766 1538 aa16.54■□□□□ 0.24
CPT1A-208ENST00000565318 TOP2AP11388 1531 aaKnown RBP16.45■□□□□ 0.22
CPT1A-208ENST00000565318 CCDC88BA6NC98 1476 aa16.39■□□□□ 0.21
CPT1A-208ENST00000565318 CADPSQ9ULU8 1353 aa16.32■□□□□ 0.2
CPT1A-208ENST00000565318 NESP48681 1621 aa16.23■□□□□ 0.19
CPT1A-208ENST00000565318 CFTRP13569 1480 aa16.22■□□□□ 0.19
CPT1A-208ENST00000565318 PDS5BQ9NTI5 1447 aa16.13■□□□□ 0.17
CPT1A-208ENST00000565318 LAMC3Q9Y6N6 1575 aa16.13■□□□□ 0.17
CPT1A-208ENST00000565318 FANCD2Q9BXW9 1451 aa16.04■□□□□ 0.16
CPT1A-208ENST00000565318 ERCC6Q03468 1493 aa16.01■□□□□ 0.15
CPT1A-208ENST00000565318 CEP164Q9UPV0 1460 aa15.94■□□□□ 0.14
CPT1A-208ENST00000565318 MRC2Q9UBG0 1479 aa15.88■□□□□ 0.13
CPT1A-208ENST00000565318 URB2Q14146 1524 aaKnown RBP15.85■□□□□ 0.13
CPT1A-208ENST00000565318 KIF21AQ7Z4S6 1674 aa15.83■□□□□ 0.13
CPT1A-208ENST00000565318 ABCC8Q09428 1581 aa15.83■□□□□ 0.12
CPT1A-208ENST00000565318 WRNQ14191 1432 aaPredicted RBP eCLIP15.82■□□□□ 0.12
CPT1A-208ENST00000565318 TOPBP1Q92547 1522 aa15.79■□□□□ 0.12
CPT1A-208ENST00000565318 WDR62O43379 1518 aa15.78■□□□□ 0.12
CPT1A-208ENST00000565318 TRIM41Q8WV44 630 aa15.77■□□□□ 0.12
CPT1A-208ENST00000565318 CUX1P39880 1505 aa15.77■□□□□ 0.11
CPT1A-208ENST00000565318 THOC2Q8NI27 1593 aaKnown RBP15.76■□□□□ 0.11
CPT1A-208ENST00000565318 PRDM2Q13029 1718 aa15.74■□□□□ 0.11
CPT1A-208ENST00000565318 CUX2O14529 1486 aa15.73■□□□□ 0.11
CPT1A-208ENST00000565318 DNMBPQ6XZF7 1577 aa15.72■□□□□ 0.11
CPT1A-208ENST00000565318 SOGA1O94964 1423 aa15.72■□□□□ 0.11
CPT1A-208ENST00000565318 PLPPR3Q6T4P5 718 aa15.69■□□□□ 0.1
CPT1A-208ENST00000565318 POLA1P09884 1462 aaPredicted RBP15.68■□□□□ 0.1
CPT1A-208ENST00000565318 FGD5Q6ZNL6 1462 aa15.67■□□□□ 0.1
CPT1A-208ENST00000565318 RAD54L2Q9Y4B4 1467 aa15.67■□□□□ 0.1
CPT1A-208ENST00000565318 SYNJ1O43426 1573 aa15.66■□□□□ 0.1
CPT1A-208ENST00000565318 TOP2BQ02880 1626 aa15.65■□□□□ 0.1
CPT1A-208ENST00000565318 IFT140Q96RY7 1462 aa15.64■□□□□ 0.09
CPT1A-208ENST00000565318 TDRD9Q8NDG6 1382 aaKnown RBP15.62■□□□□ 0.09
CPT1A-208ENST00000565318 DNAJC5Q9H3Z4 198 aa15.6■□□□□ 0.09
CPT1A-208ENST00000565318 AQRO60306 1485 aaKnown RBP eCLIP15.59■□□□□ 0.09
CPT1A-208ENST00000565318 ZNF608Q9ULD9 1512 aaPredicted RBP15.58■□□□□ 0.08
CPT1A-208ENST00000565318 BIVM-ERCC5R4GMW8 1640 aa15.57■□□□□ 0.08
CPT1A-208ENST00000565318 ABCA10Q8WWZ4 1543 aa15.55■□□□□ 0.08
CPT1A-208ENST00000565318 TARBP1Q13395 1621 aaKnown RBP15.54■□□□□ 0.08
CPT1A-208ENST00000565318 IGF1RP08069 1367 aa15.5■□□□□ 0.07
CPT1A-208ENST00000565318 KIF27Q86VH2 1401 aa15.48■□□□□ 0.07
CPT1A-208ENST00000565318 GAPVD1Q14C86 1478 aa15.47■□□□□ 0.07
CPT1A-208ENST00000565318 RUSC2Q8N2Y8 1516 aa15.47■□□□□ 0.07
CPT1A-208ENST00000565318 CSRNP3Q8WYN3 585 aa15.45■□□□□ 0.06
CPT1A-208ENST00000565318 SENP3Q9H4L4 574 aaPredicted RBP15.45■□□□□ 0.06
CPT1A-208ENST00000565318 FAM9AQ8IZU1 332 aaPredicted RBP15.44■□□□□ 0.06
CPT1A-208ENST00000565318 GRIN2BQ13224 1484 aa15.42■□□□□ 0.06
CPT1A-208ENST00000565318 CHMP7Q8WUX9 453 aaPredicted RBP15.4■□□□□ 0.06
CPT1A-208ENST00000565318 FBLN2P98095 1184 aa15.39■□□□□ 0.05
CPT1A-208ENST00000565318 WDR97A6NE52 1622 aa15.36■□□□□ 0.05
CPT1A-208ENST00000565318 CARMIL1Q5VZK9 1371 aa15.36■□□□□ 0.05
CPT1A-208ENST00000565318 EIF4G3O43432 1585 aaKnown RBP15.35■□□□□ 0.05
CPT1A-208ENST00000565318 ABCA5Q8WWZ7 1642 aa15.35■□□□□ 0.05
CPT1A-208ENST00000565318 OSCARQ8IYS5 282 aa15.34■□□□□ 0.05
CPT1A-208ENST00000565318 EEA1Q15075 1411 aa15.33■□□□□ 0.04
CPT1A-208ENST00000565318 SNAPC4Q5SXM2 1469 aa15.33■□□□□ 0.04
CPT1A-208ENST00000565318 ERICH3Q5RHP9 1530 aa15.33■□□□□ 0.04
CPT1A-208ENST00000565318 FHAD1B1AJZ9 1412 aa15.32■□□□□ 0.04
CPT1A-208ENST00000565318 MAGI1Q96QZ7 1491 aaPredicted RBP15.31■□□□□ 0.04
CPT1A-208ENST00000565318 SYNJ2O15056 1496 aa15.28■□□□□ 0.04
CPT1A-208ENST00000565318 PRXQ9BXM0 1461 aa15.27■□□□□ 0.03
CPT1A-208ENST00000565318 RAPGEF2Q9Y4G8 1499 aa15.22■□□□□ 0.03
CPT1A-208ENST00000565318 GRIN2AQ12879 1464 aa15.2■□□□□ 0.02
CPT1A-208ENST00000565318 LOC105371045A0A1W2PR82 267 aa15.19■□□□□ 0.02
CPT1A-208ENST00000565318 EHMT2Q96KQ7 1210 aa15.19■□□□□ 0.02
CPT1A-208ENST00000565318 PBRM1Q86U86 1689 aa15.18■□□□□ 0.02
CPT1A-208ENST00000565318 ADAMTS12P58397 1594 aa15.17■□□□□ 0.02
CPT1A-208ENST00000565318 JPH4Q96JJ6 628 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 140.5 ms