RNA–Protein interactions for RNA: ENST00000564517.1

RPL4-206, Transcript of ribosomal protein L4, humanhuman

TSL 4

Gene RPL4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL4-206ENST00000564517 NISCHQ9Y2I1 1504 aa18.9■□□□□ 0.62
RPL4-206ENST00000564517 CCDC180Q9P1Z9 1646 aa16.5■□□□□ 0.23
RPL4-206ENST00000564517 ABCC9O60706 1549 aa15.97■□□□□ 0.15
RPL4-206ENST00000564517 DCAF8L2P0C7V8 631 aa15.96■□□□□ 0.15
RPL4-206ENST00000564517 ZCCHC6Q5VYS8 1495 aaKnown RBP15.76■□□□□ 0.11
RPL4-206ENST00000564517 DCAF1Q9Y4B6 1507 aa15.64■□□□□ 0.09
RPL4-206ENST00000564517 MYO15BQ96JP2 1530 aa15.59■□□□□ 0.09
RPL4-206ENST00000564517 NACADO15069 1562 aa15.58■□□□□ 0.08
RPL4-206ENST00000564517 RB1CC1Q8TDY2 1594 aa15.5■□□□□ 0.07
RPL4-206ENST00000564517 SHROOM4Q9ULL8 1493 aa15.25■□□□□ 0.03
RPL4-206ENST00000564517 SCRIBQ14160 1630 aa15.14■□□□□ 0.01
RPL4-206ENST00000564517 PABPN1Q86U42 306 aaKnown RBP eCLIP15.11■□□□□ 0.01
RPL4-206ENST00000564517 SUPT5HO00267 1087 aaKnown RBP14.94□□□□□ -0.02
RPL4-206ENST00000564517 BICRAQ9NZM4 1560 aa14.88□□□□□ -0.03
RPL4-206ENST00000564517 UNC13AQ9UPW8 1703 aa14.84□□□□□ -0.03
RPL4-206ENST00000564517 CHIC1Q5VXU3 224 aa14.69□□□□□ -0.06
RPL4-206ENST00000564517 CECR2Q9BXF3 1484 aa14.65□□□□□ -0.06
RPL4-206ENST00000564517 BAZ1AQ9NRL2 1556 aaPredicted RBP14.64□□□□□ -0.07
RPL4-206ENST00000564517 RSF1Q96T23 1441 aaPredicted RBP14.58□□□□□ -0.07
RPL4-206ENST00000564517 EIF4G1Q04637 1599 aaKnown RBP14.54□□□□□ -0.08
RPL4-206ENST00000564517 MROH2BQ7Z745 1585 aa14.53□□□□□ -0.08
RPL4-206ENST00000564517 SMARCA4P51532 1647 aa14.51□□□□□ -0.09
RPL4-206ENST00000564517 SMARCA2P51531 1590 aa14.44□□□□□ -0.1
RPL4-206ENST00000564517 ATAD2BQ9ULI0 1458 aa14.44□□□□□ -0.1
RPL4-206ENST00000564517 NCAPD3P42695 1498 aa14.42□□□□□ -0.1
RPL4-206ENST00000564517 PEG3Q9GZU2 1588 aa14.37□□□□□ -0.11
RPL4-206ENST00000564517 BAZ1BQ9UIG0 1483 aaKnown RBP14.37□□□□□ -0.11
RPL4-206ENST00000564517 CC2D2AQ9P2K1 1620 aa14.37□□□□□ -0.11
RPL4-206ENST00000564517 DNAJC5BQ9UF47 199 aa14.36□□□□□ -0.11
RPL4-206ENST00000564517 WIZO95785 1651 aa14.33□□□□□ -0.12
RPL4-206ENST00000564517 HMGXB3Q12766 1538 aa14.27□□□□□ -0.12
RPL4-206ENST00000564517 TOP2AP11388 1531 aaKnown RBP14.26□□□□□ -0.13
RPL4-206ENST00000564517 CCDC88BA6NC98 1476 aa14.17□□□□□ -0.14
RPL4-206ENST00000564517 TRIM41Q8WV44 630 aa14.16□□□□□ -0.14
RPL4-206ENST00000564517 CADPSQ9ULU8 1353 aa14.07□□□□□ -0.16
RPL4-206ENST00000564517 HRCP23327 699 aa14.06□□□□□ -0.16
RPL4-206ENST00000564517 TRIM26Q12899 539 aaPredicted RBP14□□□□□ -0.17
RPL4-206ENST00000564517 CFTRP13569 1480 aa13.99□□□□□ -0.17
RPL4-206ENST00000564517 LOC105371045A0A1W2PR82 267 aa13.98□□□□□ -0.17
RPL4-206ENST00000564517 EEA1Q15075 1411 aa13.98□□□□□ -0.17
RPL4-206ENST00000564517 PDS5BQ9NTI5 1447 aa13.96□□□□□ -0.18
RPL4-206ENST00000564517 PCGF6Q9BYE7 350 aa13.92□□□□□ -0.18
RPL4-206ENST00000564517 LAMC3Q9Y6N6 1575 aa13.91□□□□□ -0.18
RPL4-206ENST00000564517 NESP48681 1621 aa13.86□□□□□ -0.19
RPL4-206ENST00000564517 ZEB1P37275 1124 aaPredicted RBP13.86□□□□□ -0.19
RPL4-206ENST00000564517 FANCD2Q9BXW9 1451 aa13.84□□□□□ -0.19
RPL4-206ENST00000564517 ERCC6Q03468 1493 aa13.82□□□□□ -0.2
RPL4-206ENST00000564517 CEP164Q9UPV0 1460 aa13.79□□□□□ -0.2
RPL4-206ENST00000564517 WRNQ14191 1432 aaPredicted RBP eCLIP13.78□□□□□ -0.2
RPL4-206ENST00000564517 ABCC8Q09428 1581 aa13.76□□□□□ -0.21
RPL4-206ENST00000564517 TNIKQ9UKE5 1360 aa13.74□□□□□ -0.21
RPL4-206ENST00000564517 FAM9AQ8IZU1 332 aaPredicted RBP13.7□□□□□ -0.22
RPL4-206ENST00000564517 KIF21BO75037 1637 aa13.69□□□□□ -0.22
RPL4-206ENST00000564517 MRC2Q9UBG0 1479 aa13.68□□□□□ -0.22
RPL4-206ENST00000564517 GOLGA3Q08378 1498 aa13.67□□□□□ -0.22
RPL4-206ENST00000564517 CSRNP3Q8WYN3 585 aa13.66□□□□□ -0.22
RPL4-206ENST00000564517 BIVM-ERCC5R4GMW8 1640 aa13.63□□□□□ -0.23
RPL4-206ENST00000564517 PRDM2Q13029 1718 aa13.62□□□□□ -0.23
RPL4-206ENST00000564517 TOP2BQ02880 1626 aa13.62□□□□□ -0.23
RPL4-206ENST00000564517 TOPBP1Q92547 1522 aa13.61□□□□□ -0.23
RPL4-206ENST00000564517 CEP162Q5TB80 1403 aa13.61□□□□□ -0.23
RPL4-206ENST00000564517 CUX1P39880 1505 aa13.6□□□□□ -0.23
RPL4-206ENST00000564517 URB2Q14146 1524 aaKnown RBP13.6□□□□□ -0.23
RPL4-206ENST00000564517 SYNJ1O43426 1573 aa13.6□□□□□ -0.23
RPL4-206ENST00000564517 SOGA1O94964 1423 aa13.6□□□□□ -0.23
RPL4-206ENST00000564517 DNMBPQ6XZF7 1577 aa13.6□□□□□ -0.23
RPL4-206ENST00000564517 KIF21AQ7Z4S6 1674 aa13.57□□□□□ -0.24
RPL4-206ENST00000564517 FGD5Q6ZNL6 1462 aa13.55□□□□□ -0.24
RPL4-206ENST00000564517 WDR62O43379 1518 aa13.54□□□□□ -0.24
RPL4-206ENST00000564517 ERICH3Q5RHP9 1530 aa13.53□□□□□ -0.24
RPL4-206ENST00000564517 KIF27Q86VH2 1401 aa13.52□□□□□ -0.25
RPL4-206ENST00000564517 POLA1P09884 1462 aaPredicted RBP13.52□□□□□ -0.25
RPL4-206ENST00000564517 IFT140Q96RY7 1462 aa13.51□□□□□ -0.25
RPL4-206ENST00000564517 RAD54L2Q9Y4B4 1467 aa13.48□□□□□ -0.25
RPL4-206ENST00000564517 CUX2O14529 1486 aa13.48□□□□□ -0.25
RPL4-206ENST00000564517 RUSC2Q8N2Y8 1516 aa13.47□□□□□ -0.25
RPL4-206ENST00000564517 TDRD9Q8NDG6 1382 aaKnown RBP13.46□□□□□ -0.25
RPL4-206ENST00000564517 THOC2Q8NI27 1593 aaKnown RBP13.46□□□□□ -0.25
RPL4-206ENST00000564517 ABCA10Q8WWZ4 1543 aa13.44□□□□□ -0.26
RPL4-206ENST00000564517 UBTFP17480 764 aaKnown RBP13.44□□□□□ -0.26
RPL4-206ENST00000564517 CLIP1P30622 1438 aa13.41□□□□□ -0.26
RPL4-206ENST00000564517 VPS8Q8N3P4 1428 aa13.41□□□□□ -0.26
RPL4-206ENST00000564517 PRXQ9BXM0 1461 aa13.41□□□□□ -0.26
RPL4-206ENST00000564517 IGF1RP08069 1367 aa13.4□□□□□ -0.26
RPL4-206ENST00000564517 GAPVD1Q14C86 1478 aa13.4□□□□□ -0.26
RPL4-206ENST00000564517 AQRO60306 1485 aaKnown RBP eCLIP13.39□□□□□ -0.27
RPL4-206ENST00000564517 PPARGC1BQ86YN6 1023 aaKnown RBP13.38□□□□□ -0.27
RPL4-206ENST00000564517 CHMP7Q8WUX9 453 aaPredicted RBP13.35□□□□□ -0.27
RPL4-206ENST00000564517 GRIN2BQ13224 1484 aa13.35□□□□□ -0.27
RPL4-206ENST00000564517 TARBP1Q13395 1621 aaKnown RBP13.35□□□□□ -0.27
RPL4-206ENST00000564517 CARMIL1Q5VZK9 1371 aa13.34□□□□□ -0.27
RPL4-206ENST00000564517 RAPGEF2Q9Y4G8 1499 aa13.34□□□□□ -0.27
RPL4-206ENST00000564517 ZNF608Q9ULD9 1512 aaPredicted RBP13.34□□□□□ -0.27
RPL4-206ENST00000564517 FBLN2P98095 1184 aa13.33□□□□□ -0.28
RPL4-206ENST00000564517 EHMT2Q96KQ7 1210 aa13.33□□□□□ -0.28
RPL4-206ENST00000564517 WDR97A6NE52 1622 aa13.32□□□□□ -0.28
RPL4-206ENST00000564517 APLP2Q06481 763 aa13.3□□□□□ -0.28
RPL4-206ENST00000564517 FHAD1B1AJZ9 1412 aa13.28□□□□□ -0.28
RPL4-206ENST00000564517 CCER1Q8TC90 406 aaPredicted RBP13.27□□□□□ -0.29
RPL4-206ENST00000564517 MAP3K1Q13233 1512 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms