RNA–Protein interactions for RNA: ENST00000563525.2

USP31-202, Transcript of ubiquitin specific peptidase 31, humanhuman

TSL 5

Gene USP31, Length 1,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP31-202ENST00000563525 NISCHQ9Y2I1 1504 aa29.48■■■□□ 2.31
USP31-202ENST00000563525 CCDC180Q9P1Z9 1646 aa26.07■■□□□ 1.76
USP31-202ENST00000563525 ABCC9O60706 1549 aa25.42■■□□□ 1.66
USP31-202ENST00000563525 ZCCHC6Q5VYS8 1495 aaKnown RBP24.6■■□□□ 1.53
USP31-202ENST00000563525 DCAF8L2P0C7V8 631 aa24.58■■□□□ 1.52
USP31-202ENST00000563525 NACADO15069 1562 aa24.48■■□□□ 1.51
USP31-202ENST00000563525 RB1CC1Q8TDY2 1594 aa24.46■■□□□ 1.51
USP31-202ENST00000563525 MYO15BQ96JP2 1530 aa24.38■■□□□ 1.49
USP31-202ENST00000563525 DCAF1Q9Y4B6 1507 aa24.35■■□□□ 1.49
USP31-202ENST00000563525 UNC13AQ9UPW8 1703 aa23.95■■□□□ 1.42
USP31-202ENST00000563525 SCRIBQ14160 1630 aa23.88■■□□□ 1.41
USP31-202ENST00000563525 PABPN1Q86U42 306 aaKnown RBP eCLIP23.81■■□□□ 1.4
USP31-202ENST00000563525 BICRAQ9NZM4 1560 aa23.78■■□□□ 1.4
USP31-202ENST00000563525 SHROOM4Q9ULL8 1493 aa23.47■■□□□ 1.35
USP31-202ENST00000563525 AEBP2Q6ZN18 517 aaPredicted RBP23.34■■□□□ 1.33
USP31-202ENST00000563525 DNAJC5BQ9UF47 199 aa23.2■■□□□ 1.3
USP31-202ENST00000563525 EIF4G1Q04637 1599 aaKnown RBP23.12■■□□□ 1.29
USP31-202ENST00000563525 CECR2Q9BXF3 1484 aa22.99■■□□□ 1.27
USP31-202ENST00000563525 CC2D2AQ9P2K1 1620 aa22.98■■□□□ 1.27
USP31-202ENST00000563525 SMARCA4P51532 1647 aa22.83■■□□□ 1.25
USP31-202ENST00000563525 BAZ1AQ9NRL2 1556 aaPredicted RBP22.81■■□□□ 1.24
USP31-202ENST00000563525 MROH2BQ7Z745 1585 aa22.75■■□□□ 1.23
USP31-202ENST00000563525 ATAD2BQ9ULI0 1458 aa22.67■■□□□ 1.22
USP31-202ENST00000563525 NCAPD3P42695 1498 aa22.61■■□□□ 1.21
USP31-202ENST00000563525 SMARCA2P51531 1590 aa22.61■■□□□ 1.21
USP31-202ENST00000563525 PEG3Q9GZU2 1588 aa22.59■■□□□ 1.21
USP31-202ENST00000563525 RSF1Q96T23 1441 aaPredicted RBP22.55■■□□□ 1.2
USP31-202ENST00000563525 WIZO95785 1651 aa22.51■■□□□ 1.19
USP31-202ENST00000563525 HMGXB3Q12766 1538 aa22.5■■□□□ 1.19
USP31-202ENST00000563525 BAZ1BQ9UIG0 1483 aaKnown RBP22.48■■□□□ 1.19
USP31-202ENST00000563525 TOP2AP11388 1531 aaKnown RBP22.25■■□□□ 1.15
USP31-202ENST00000563525 CHIC1Q5VXU3 224 aa22.15■■□□□ 1.14
USP31-202ENST00000563525 SUPT5HO00267 1087 aaKnown RBP22.14■■□□□ 1.13
USP31-202ENST00000563525 NESP48681 1621 aa22.07■■□□□ 1.12
USP31-202ENST00000563525 CCDC88BA6NC98 1476 aa22.01■■□□□ 1.11
USP31-202ENST00000563525 LAMC3Q9Y6N6 1575 aa21.97■■□□□ 1.11
USP31-202ENST00000563525 CADPSQ9ULU8 1353 aa21.96■■□□□ 1.11
USP31-202ENST00000563525 CFTRP13569 1480 aa21.88■■□□□ 1.09
USP31-202ENST00000563525 ERCC6Q03468 1493 aa21.86■■□□□ 1.09
USP31-202ENST00000563525 PDS5BQ9NTI5 1447 aa21.81■■□□□ 1.08
USP31-202ENST00000563525 KIF21AQ7Z4S6 1674 aa21.77■■□□□ 1.08
USP31-202ENST00000563525 FANCD2Q9BXW9 1451 aa21.73■■□□□ 1.07
USP31-202ENST00000563525 PRDM2Q13029 1718 aa21.68■■□□□ 1.06
USP31-202ENST00000563525 CEP164Q9UPV0 1460 aa21.67■■□□□ 1.06
USP31-202ENST00000563525 THOC2Q8NI27 1593 aaKnown RBP21.66■■□□□ 1.06
USP31-202ENST00000563525 MRC2Q9UBG0 1479 aa21.6■■□□□ 1.05
USP31-202ENST00000563525 CUX2O14529 1486 aa21.54■■□□□ 1.04
USP31-202ENST00000563525 WDR62O43379 1518 aa21.53■■□□□ 1.04
USP31-202ENST00000563525 URB2Q14146 1524 aaKnown RBP21.52■■□□□ 1.03
USP31-202ENST00000563525 TOPBP1Q92547 1522 aa21.4■■□□□ 1.02
USP31-202ENST00000563525 DNMBPQ6XZF7 1577 aa21.38■■□□□ 1.01
USP31-202ENST00000563525 ABCC8Q09428 1581 aa21.34■■□□□ 1.01
USP31-202ENST00000563525 CUX1P39880 1505 aa21.33■■□□□ 1
USP31-202ENST00000563525 POLA1P09884 1462 aaPredicted RBP21.24■□□□□ 0.99
USP31-202ENST00000563525 WRNQ14191 1432 aaPredicted RBP eCLIP21.24■□□□□ 0.99
USP31-202ENST00000563525 FGD5Q6ZNL6 1462 aa21.22■□□□□ 0.99
USP31-202ENST00000563525 SYNJ1O43426 1573 aa21.21■□□□□ 0.99
USP31-202ENST00000563525 IFT140Q96RY7 1462 aa21.2■□□□□ 0.98
USP31-202ENST00000563525 RAD54L2Q9Y4B4 1467 aa21.17■□□□□ 0.98
USP31-202ENST00000563525 TOP2BQ02880 1626 aa21.16■□□□□ 0.98
USP31-202ENST00000563525 TARBP1Q13395 1621 aaKnown RBP21.15■□□□□ 0.98
USP31-202ENST00000563525 BIVM-ERCC5R4GMW8 1640 aa21.15■□□□□ 0.98
USP31-202ENST00000563525 ZNF608Q9ULD9 1512 aaPredicted RBP21.14■□□□□ 0.98
USP31-202ENST00000563525 SOGA1O94964 1423 aa21.14■□□□□ 0.98
USP31-202ENST00000563525 AQRO60306 1485 aaKnown RBP eCLIP21.04■□□□□ 0.96
USP31-202ENST00000563525 EIF4G3O43432 1585 aaKnown RBP21.04■□□□□ 0.96
USP31-202ENST00000563525 TDRD9Q8NDG6 1382 aaKnown RBP21.03■□□□□ 0.96
USP31-202ENST00000563525 WDR97A6NE52 1622 aa21.02■□□□□ 0.96
USP31-202ENST00000563525 ABCA10Q8WWZ4 1543 aa21■□□□□ 0.95
USP31-202ENST00000563525 ABCA5Q8WWZ7 1642 aa20.91■□□□□ 0.94
USP31-202ENST00000563525 GAPVD1Q14C86 1478 aa20.9■□□□□ 0.94
USP31-202ENST00000563525 TRIM41Q8WV44 630 aa20.86■□□□□ 0.93
USP31-202ENST00000563525 GRIN2BQ13224 1484 aa20.86■□□□□ 0.93
USP31-202ENST00000563525 SNAPC4Q5SXM2 1469 aa20.84■□□□□ 0.93
USP31-202ENST00000563525 PBRM1Q86U86 1689 aa20.83■□□□□ 0.93
USP31-202ENST00000563525 MAGI1Q96QZ7 1491 aaPredicted RBP20.78■□□□□ 0.92
USP31-202ENST00000563525 KIF27Q86VH2 1401 aa20.76■□□□□ 0.91
USP31-202ENST00000563525 FBLN2P98095 1184 aa20.74■□□□□ 0.91
USP31-202ENST00000563525 ERICH3Q5RHP9 1530 aa20.74■□□□□ 0.91
USP31-202ENST00000563525 CHD1O14646 1710 aa20.72■□□□□ 0.91
USP31-202ENST00000563525 RUSC2Q8N2Y8 1516 aa20.71■□□□□ 0.91
USP31-202ENST00000563525 SYNJ2O15056 1496 aa20.71■□□□□ 0.91
USP31-202ENST00000563525 ADAMTS12P58397 1594 aa20.7■□□□□ 0.9
USP31-202ENST00000563525 OSCARQ8IYS5 282 aa20.68■□□□□ 0.9
USP31-202ENST00000563525 CHMP7Q8WUX9 453 aaPredicted RBP20.68■□□□□ 0.9
USP31-202ENST00000563525 IGF1RP08069 1367 aa20.68■□□□□ 0.9
USP31-202ENST00000563525 DNAJC5Q9H3Z4 198 aa20.68■□□□□ 0.9
USP31-202ENST00000563525 FHAD1B1AJZ9 1412 aa20.65■□□□□ 0.9
USP31-202ENST00000563525 GRIN2AQ12879 1464 aa20.61■□□□□ 0.89
USP31-202ENST00000563525 CUL7Q14999 1698 aa20.57■□□□□ 0.88
USP31-202ENST00000563525 CARMIL1Q5VZK9 1371 aa20.55■□□□□ 0.88
USP31-202ENST00000563525 CEP170Q5SW79 1584 aa20.52■□□□□ 0.88
USP31-202ENST00000563525 CLASP1Q7Z460 1538 aa20.51■□□□□ 0.87
USP31-202ENST00000563525 NUP160Q12769 1436 aa20.51■□□□□ 0.87
USP31-202ENST00000563525 FAM9AQ8IZU1 332 aaPredicted RBP20.48■□□□□ 0.87
USP31-202ENST00000563525 EEA1Q15075 1411 aa20.45■□□□□ 0.86
USP31-202ENST00000563525 CSRNP3Q8WYN3 585 aa20.44■□□□□ 0.86
USP31-202ENST00000563525 RAPGEF2Q9Y4G8 1499 aa20.44■□□□□ 0.86
USP31-202ENST00000563525 PRXQ9BXM0 1461 aa20.43■□□□□ 0.86
USP31-202ENST00000563525 ARHGEF11O15085 1522 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms